Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G038100 Phaseolus vulgaris HOM05D005741 ORTHO05D007240 9.3e-292 1006.1 501 100.0
VMungo0464G0479 Vigna mungo HOM05D005741 ORTHO05D007240 4.9e-269 930.6 501 91.8
Glyma.13G055300 Glycine max HOM05D005741 ORTHO05D007240 4.1e-255 884.4 502 86.5
Lj2g0010165 Lotus japonicus HOM05D005741 ORTHO05D007240 1.4e-231 806.2 500 79.0
Ca_17300_v3 Cicer arietinum L. HOM05D005741 ORTHO05D007240 7.2e-228 793.9 488 79.7
Psat7g009600 Pisum sativum HOM05D005741 ORTHO05D007240 5.2e-218 761.1 487 76.2
Medtr8g104850 Medicago truncatula HOM05D005741 ORTHO05D007240 1.7e-216 756.1 486 76.1
TPR.G32686 Trifolium pratense HOM05D005741 ORTHO05D007240 2.3e-213 745.7 487 75.6
Lalb_Chr07g0190101 Lupinus albus HOM05D005741 ORTHO05D007240 2.1e-211 739.2 486 74.5
Ca_17307_v3 Cicer arietinum L. HOM05D005741 ORTHO05D007240 1.0e-205 720.3 423 82.5
arahy.Tifrunner.gnm1.ann1.F09Q1T Arachis hypogaea HOM05D005741 ORTHO05D007240 8.3e-200 700.7 484 70.7
arahy.Tifrunner.gnm1.ann1.915X16 Arachis hypogaea HOM05D005741 ORTHO05D007240 3.2e-199 698.7 484 70.7
Haze_07941 Corylus avellana HOM05D005741 ORTHO05D007240 1.7e-168 596.7 488 61.7
RcHm_v2.0_Chr7g0204071 Rosa chinensis HOM05D005741 ORTHO05D007240 2.9e-168 595.9 501 61.7
Gohir.D09G191200 Gossypium hirsutum HOM05D005741 ORTHO05D007240 6.4e-168 594.7 493 61.9
CiPaw.11G082200 Carya illinoinensis HOM05D005741 ORTHO05D007240 1.1e-167 594.0 494 60.9
Duzib084G1038 Durio zibethinus HOM05D005741 ORTHO05D007240 1.9e-167 593.2 457 64.3
Sabra03G0049500 Salix brachista HOM05D005741 ORTHO05D007240 1.9e-167 593.2 435 66.4
Potri.003G079400 Populus trichocarpa HOM05D005741 ORTHO05D007240 3.2e-167 592.4 455 63.7
QL12p011266 Quercus lobata HOM05D005741 ORTHO05D007240 4.2e-167 592.0 500 59.0
CSS0012403 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 9.3e-167 590.9 504 58.9
Actinidia02155 Actinidia chinensis HOM05D005741 ORTHO05D007240 1.6e-166 590.1 484 60.7
Gorai.006G214000 Gossypium raimondii HOM05D005741 ORTHO05D007240 2.7e-166 589.3 493 61.7
Prupe.5G065000 Prunus persica HOM05D005741 ORTHO05D007240 2.7e-166 589.3 507 59.8
TWI81G0674 Tripterygium wilfordii HOM05D005741 ORTHO05D007240 3.5e-166 589.0 485 60.0
Thecc.03G247800 Theobroma cacao HOM05D005741 ORTHO05D007240 6.0e-166 588.2 500 60.2
Gorai.003G175200 Gossypium raimondii HOM05D005741 ORTHO05D007240 6.7e-165 584.7 512 58.4
TWI15G0579 Tripterygium wilfordii HOM05D005741 ORTHO05D007240 1.5e-164 583.6 491 60.5
Gohir.A09G196600 Gossypium hirsutum HOM05D005741 ORTHO05D007240 4.3e-164 582.0 487 61.0
DCAR_008509 Daucus carota HOM05D005741 ORTHO05D007240 5.6e-164 581.6 485 59.0
CANSAT21G0669 Cannabis sativa HOM05D005741 ORTHO05D007240 9.6e-164 580.9 505 59.0
Gohir.D03G165500 Gossypium hirsutum HOM05D005741 ORTHO05D007240 1.6e-163 580.1 512 57.8
Duzib205G0633 Durio zibethinus HOM05D005741 ORTHO05D007240 2.1e-163 579.7 462 63.4
THA.LOC104806667 Tarenaya hassleriana HOM05D005741 ORTHO05D007240 1.1e-162 577.4 480 59.6
Manes.01G083800 Manihot esculenta HOM05D005741 ORTHO05D007240 1.4e-162 577.0 468 61.1
MELO3C005514.2 Cucumis melo HOM05D005741 ORTHO05D007240 3.1e-162 575.9 488 59.4
CsaV3_5G004450 Cucumis sativus L. HOM05D005741 ORTHO05D007240 1.2e-161 573.9 442 62.2
Sed0015384 Sechium edule HOM05D005741 ORTHO05D007240 2.6e-161 572.8 474 59.7
GSVIVG01005817001 Vitis vinifera HOM05D005741 ORTHO05D007240 1.9e-159 566.6 435 63.4
Thhalv10024957m.g Eutrema salsugineum HOM05D005741 ORTHO05D007240 3.2e-159 565.8 481 58.2
FAN13G2335 Fragaria x ananassa HOM05D005741 ORTHO05D007240 9.3e-159 564.3 481 59.9
vmacro00008 Vaccinium macrocarpon HOM05D005741 ORTHO05D007240 1.2e-158 563.9 538 53.9
Ciclev10019844m.g Citrus clementina HOM05D005741 ORTHO05D007240 2.1e-158 563.1 480 57.7
FvH4_5g19490 Fragaria vesca HOM05D005741 ORTHO05D007240 2.1e-158 563.1 481 59.7
Eucgr.E00405 Eucalyptus grandis HOM05D005741 ORTHO05D007240 7.9e-158 561.2 482 57.3
Lj2A224T24 Lonicera japonica HOM05D005741 ORTHO05D007240 1.8e-157 560.1 473 58.8
AT4G17430 Arabidopsis thaliana HOM05D005741 ORTHO05D007240 3.0e-157 559.3 507 56.4
FAN18G1401 Fragaria x ananassa HOM05D005741 ORTHO05D007240 8.7e-157 557.8 481 59.3
Atru.chr9.1271 Acer truncatum HOM05D005741 ORTHO05D007240 1.1e-156 557.4 496 56.0
CARHR224030 Cardamine hirsuta HOM05D005741 ORTHO05D007240 1.1e-156 557.4 481 57.2
FAN18G3259 Fragaria x ananassa HOM05D005741 ORTHO05D007240 2.5e-156 556.2 481 59.0
BcaNung00094 Brassica carinata HOM05D005741 ORTHO05D007240 9.6e-156 554.3 481 58.6
Nn6g33867 Nelumbo nucifera HOM05D005741 ORTHO05D007240 9.6e-156 554.3 493 56.2
HanXRQChr16g0501101 Helianthus annuus HOM05D005741 ORTHO05D007240 1.3e-155 553.9 469 58.6
AL7G37290 Arabidopsis lyrata HOM05D005741 ORTHO05D007240 4.8e-155 552.0 508 55.9
FAN04G2833 Fragaria x ananassa HOM05D005741 ORTHO05D007240 6.2e-155 551.6 481 58.8
PSO782G4316 Papaver somniferum HOM05D005741 ORTHO05D007240 8.2e-155 551.2 487 57.1
PSO063G3551 Papaver somniferum HOM05D005741 ORTHO05D007240 1.8e-154 550.1 487 56.9
Carub.0007s2399 Capsella rubella HOM05D005741 ORTHO05D007240 2.4e-154 549.7 461 59.7
Migut.A01137 Erythranthe guttata HOM05D005741 ORTHO05D007240 2.4e-154 549.7 475 57.5
C01p25020 Brassica napus HOM05D005741 ORTHO05D007240 6.9e-154 548.1 482 57.7
BolC1t02446H Brassica oleracea HOM05D005741 ORTHO05D007240 6.9e-154 548.1 482 57.7
Solyc08g078380.3 Solanum lycopersicum HOM05D005741 ORTHO05D007240 1.5e-153 547.0 490 55.5
BraA01t01920Z Brassica rapa HOM05D005741 ORTHO05D007240 3.4e-153 545.8 482 57.3
MD04G1060600 Malus domestica HOM05D005741 ORTHO05D007240 4.5e-153 545.4 502 57.4
BcaC09g50473 Brassica carinata HOM05D005741 ORTHO05D007240 7.6e-153 544.7 482 57.5
PGSC0003DMG400004829 Solanum tuberosum HOM05D005741 ORTHO05D007240 1.3e-152 543.9 490 55.9
Aa31sc151G50 Aethionema arabicum HOM05D005741 ORTHO05D007240 1.7e-152 543.5 480 57.3
A01p19940 Brassica napus HOM05D005741 ORTHO05D007240 1.7e-152 543.5 482 57.3
Sopen08g026870 Solanum pennellii HOM05D005741 ORTHO05D007240 1.7e-152 543.5 490 55.3
COL.COLO4_37119 Corchorus olitorius HOM05D005741 ORTHO05D007240 3.8e-152 542.3 405 65.7
ClCG01G004250 Citrullus lanatus HOM05D005741 ORTHO05D007240 6.5e-152 541.6 470 58.5
EL10Ac1g01729 Beta vulgaris HOM05D005741 ORTHO05D007240 1.2e-150 537.3 475 56.0
Peaxi162Scf00214g00035 Petunia axillaris HOM05D005741 ORTHO05D007240 4.6e-150 535.4 490 55.7
Nitab4.5_0003050g0020 Nicotiana tabacum HOM05D005741 ORTHO05D007240 1.3e-149 533.9 491 55.8
Nitab4.5_0001381g0010 Nicotiana tabacum HOM05D005741 ORTHO05D007240 1.8e-149 533.5 425 61.2
CAN.G1178.14 Capsicum annuum HOM05D005741 ORTHO05D007240 1.1e-148 530.8 420 61.9
Aqoxy3G02814 Aquilegia oxysepala HOM05D005741 ORTHO05D007240 2.5e-148 529.6 434 58.5
Lsat_1_v5_gn_6_59361 Lactuca sativa HOM05D005741 ORTHO05D007240 5.7e-148 528.5 498 54.6
SGA_v2.0_scaffold199G41222 Striga asiatica HOM05D005741 ORTHO05D007240 5.7e-148 528.5 510 53.1
FAN08G2842 Fragaria x ananassa HOM05D005741 ORTHO05D007240 6.3e-147 525.0 481 57.0
CDE02G0403 Ceratophyllum demersum HOM05D005741 ORTHO05D007240 9.0e-146 521.2 469 56.9
CDE09G0915 Ceratophyllum demersum HOM05D005741 ORTHO05D007240 3.8e-144 515.8 469 56.3
Sc22g0001010 Simmondsia chinensis HOM05D005741 ORTHO05D007240 1.1e-143 514.2 481 55.1
Thhalv10000864m.g Eutrema salsugineum HOM05D005741 ORTHO05D007240 3.0e-141 506.1 494 52.8
Cc08_g12130 Coffea canephora HOM05D005741 ORTHO05D007240 8.8e-141 504.6 481 55.5
SalBow5G2168 Salvia bowleyana HOM05D005741 ORTHO05D007240 4.3e-140 502.3 474 55.3
ATR0057G109 Amborella trichopoda HOM05D005741 ORTHO05D007240 1.3e-139 500.7 507 52.7
Rhsim03G0144800 Rhododendron simsii HOM05D005741 ORTHO05D007240 6.3e-139 498.4 486 53.3
TAR629G0196 Trochodendron aralioides HOM05D005741 ORTHO05D007240 1.2e-137 494.2 396 60.9
SHI07684 Sapria himalayana HOM05D005741 ORTHO05D007240 3.4e-137 492.7 481 52.6
Os10g0561200 Oryza sativa ssp. japonica HOM05D005741 ORTHO05D007240 1.7e-136 490.3 482 52.5
Zm00001eb023170 Zea mays HOM05D005741 ORTHO05D007240 5.0e-136 488.8 491 51.3
unitig_0.g1051 Utricularia gibba HOM05D005741 ORTHO05D007240 1.1e-135 487.6 488 50.8
AUR62022412 Chenopodium quinoa HOM05D005741 ORTHO05D007240 7.2e-135 485.0 396 58.6
SEGI_37405 Sequoiadendron giganteum HOM05D005741 ORTHO05D007240 9.4e-135 484.6 482 52.3
AUR62042169 Chenopodium quinoa HOM05D005741 ORTHO05D007240 1.8e-133 480.3 396 58.1
Gohir.A03G006700 Gossypium hirsutum HOM05D005741 ORTHO05D007240 4.4e-132 475.7 389 61.2
Hund30921 Selenicereus undatus HOM05D005741 ORTHO05D007240 8.2e-131 471.5 424 54.5
PGR042G2173 Punica granatum HOM05D005741 ORTHO05D007240 1.4e-130 470.7 487 49.9
Hund20780 Selenicereus undatus HOM05D005741 ORTHO05D007240 2.6e-129 466.5 445 52.1
ECA233G5769 Erigeron canadensis HOM05D000263 ORTHO05D000213 5.5e-127 458.8 442 52.3
Hma1.2p1_1136F.1_g260550 Hydrangea macrophylla HOM05D005741 ORTHO05D007240 3.0e-117 426.4 343 59.8
Oeu036348.1 Olea europaea HOM05D005741 ORTHO05D007240 9.7e-116 421.4 343 58.3
Dinv03497 Davidia involucrata HOM05D005741 ORTHO05D007240 4.1e-114 416.0 347 59.1
TAR365G0013 Trochodendron aralioides HOM05D005741 ORTHO05D007240 1.6e-113 414.1 348 59.5
CSS0035552 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 4.2e-111 406.0 345 59.7
Lj1g0021170 Lotus japonicus HOM05D005741 ORTHO05D007240 4.4e-108 396.0 422 52.4
Cc11_g11020 Coffea canephora HOM05D005741 ORTHO05D007240 1.6e-94 350.9 283 61.8
AagrBONN_evm.TU.Sc2ySwM_228.4051__4052 Anthoceros agrestis HOM05D005741 ORTHO05D007240 4.0e-85 319.7 453 40.8
Glyma.19G032167 Glycine max HOM05D005741 ORTHO05D007240 1.5e-84 317.8 185 80.5
SMO358G0726 Selaginella moellendorffii HOM05D005741 ORTHO05D007240 3.4e-84 316.6 424 41.3
Aa31LG6G180 Aethionema arabicum HOM05D005741 ORTHO05D007240 2.1e-78 297.4 321 52.6
Dinv39172 Davidia involucrata HOM05D005741 ORTHO05D007240 2.2e-75 287.3 224 62.5
QL05p056282 Quercus lobata HOM05D005741 ORTHO05D007240 2.1e-73 280.8 404 41.1
Glyma.19G032233 Glycine max HOM05D005741 ORTHO05D007240 3.3e-71 273.5 169 79.9
QL05p056241 Quercus lobata HOM05D005741 ORTHO05D007240 2.9e-67 260.4 203 64.0
Mapoly0027s0023 Marchantia polymorpha HOM05D005741 ORTHO05D007240 7.8e-65 252.3 458 36.5
QL05p056380 Quercus lobata HOM05D005741 ORTHO05D007240 1.3e-64 251.5 215 59.5
MD06G1054000 Malus domestica HOM05D005741 ORTHO05D007240 1.5e-63 248.1 200 61.5
Mapoly0048s0017 Marchantia polymorpha HOM05D005741 ORTHO05D007240 1.6e-46 191.4 479 30.1
Sed0012710 Sechium edule HOM05D005741 ORTHO05D007240 2.4e-45 187.6 339 36.6
CSS0043083 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 6.5e-43 179.5 166 54.2
vmacro00009 Vaccinium macrocarpon HOM05D005741 ORTHO05D007240 1.9e-39 167.9 195 47.7
Pp3c6_17590 Physcomitrium patens HOM05D005741 ORTHO05D007240 2.3e-32 144.4 235 35.3
vmacro00011 Vaccinium macrocarpon HOM05D005741 ORTHO05D007240 8.7e-32 142.5 273 36.6
Actinidia14404 Actinidia chinensis HOM05D005741 ORTHO05D007240 8.2e-30 136.0 336 29.8
CSS0008948 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 1.1e-21 109.0 110 51.8
CSS0012087 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 2.4e-21 107.8 115 49.6
Pp3c6_17579 Physcomitrium patens HOM05D005741 ORTHO05D007240 9.1e-21 105.9 76 60.5
Oeu057691.1 Olea europaea HOM05D005741 ORTHO05D007240 1.5e-20 105.1 76 63.2
CSS0007358 Camellia sinensis var. sinensis HOM05D005741 ORTHO05D007240 2.0e-20 104.8 113 49.6
Aa31LG6G170 Aethionema arabicum HOM05D005741 ORTHO05D007240 2.1e-17 94.7 108 42.6
AL7G37230 Arabidopsis lyrata HOM05D005741 ORTHO05D007240 4.8e-14 83.6 60 66.7
Hma1.2p1_2773F.1_g328260 Hydrangea macrophylla HOM05D005741 ORTHO05D228475 7.7e-12 76.3 82 47.6


User provided reference genes

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