Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G037300 Phaseolus vulgaris HOM05D006882 ORTHO05D008688 4.0e-72 274.6 135 100.0
VMungo0464G1672 Vigna mungo HOM05D006882 ORTHO05D008688 1.9e-50 202.6 133 80.5
Glyma.19G030100 Glycine max HOM05D006882 ORTHO05D008688 1.5e-47 193.0 133 76.7
Glyma.13G056500 Glycine max HOM05D006882 ORTHO05D008688 1.2e-36 156.8 111 77.5
TPR.G10007 Trifolium pratense HOM05D006882 ORTHO05D008688 1.6e-33 146.4 134 59.7
Glyma.01G085200 Glycine max HOM05D006882 ORTHO05D008688 2.8e-33 145.6 108 75.0
Lj2g0004633 Lotus japonicus HOM05D006882 ORTHO05D008688 6.2e-33 144.4 133 59.4
arahy.Tifrunner.gnm1.ann1.YR6PCG Arachis hypogaea HOM05D006882 ORTHO05D008688 1.4e-32 143.3 132 60.6
Psat1g068840 Pisum sativum HOM05D006882 ORTHO05D008688 5.2e-32 141.4 135 60.0
arahy.Tifrunner.gnm1.ann1.PJ6ZH1 Arachis hypogaea HOM05D006882 ORTHO05D008688 1.5e-31 139.8 131 59.5
CiPaw.03G088500 Carya illinoinensis HOM05D006882 ORTHO05D008688 3.6e-25 118.6 117 55.6
Dinv34941 Davidia involucrata HOM05D006882 ORTHO05D008688 1.8e-24 116.3 116 56.9
Medtr6g015260 Medicago truncatula HOM05D006882 ORTHO05D008688 2.4e-24 115.9 124 54.8
Medtr6g015280 Medicago truncatula HOM05D006882 ORTHO05D008688 4.0e-24 115.2 125 54.4
PGR004G1649 Punica granatum HOM05D006882 ORTHO05D008688 6.9e-24 114.4 115 53.9
Lalb_Chr06g0174961 Lupinus albus HOM05D006882 ORTHO05D008688 9.0e-24 114.0 125 56.0
QL02p067584 Quercus lobata HOM05D006882 ORTHO05D008688 2.0e-23 112.8 111 55.9
Potri.017G094200 Populus trichocarpa HOM05D006882 ORTHO05D008688 7.6e-23 110.9 116 54.3
Duzib147G0673 Durio zibethinus HOM05D006882 ORTHO05D008688 1.7e-22 109.8 115 54.8
GSVIVG01032906001 Vitis vinifera HOM05D006882 ORTHO05D008688 1.7e-22 109.8 116 51.7
MD17G1059700 Malus domestica HOM05D006882 ORTHO05D008688 4.9e-22 108.2 113 53.1
Sabra17G0083000 Salix brachista HOM05D006882 ORTHO05D008688 1.1e-21 107.1 116 51.7
Prupe.3G254900 Prunus persica HOM05D006882 ORTHO05D008688 1.4e-21 106.7 119 56.3
COL.COLO4_04934 Corchorus olitorius HOM05D006882 ORTHO05D008688 4.2e-21 105.1 107 54.2
Thecc.04G095700 Theobroma cacao HOM05D006882 ORTHO05D008688 2.1e-20 102.8 106 54.7
vmacro05638 Vaccinium macrocarpon HOM05D006882 ORTHO05D008688 2.1e-20 102.8 116 51.7
Cfa007668 Carpinus fangiana HOM05D006882 ORTHO05D008688 2.7e-20 102.4 116 50.9
Haze_14430 Corylus avellana HOM05D006882 ORTHO05D008688 2.7e-20 102.4 116 50.9
MD09G1066800 Malus domestica HOM05D006882 ORTHO05D008688 3.5e-20 102.1 103 53.4
Ca_04305_v3 Cicer arietinum L. HOM05D006882 ORTHO05D008688 6.0e-20 101.3 115 56.5
Duzib264G0735 Durio zibethinus HOM05D006882 ORTHO05D008688 8.7e-19 97.4 107 54.2
Eucgr.I02034 Eucalyptus grandis HOM05D006882 ORTHO05D008688 8.7e-19 97.4 126 47.6
TAR371G1018 Trochodendron aralioides HOM05D006882 ORTHO05D008688 1.1e-18 97.1 104 54.8
CANSAT64G2010 Cannabis sativa HOM05D006882 ORTHO05D008688 3.3e-18 95.5 110 52.7
Cc07_g04230 Coffea canephora HOM05D006882 ORTHO05D008688 3.3e-18 95.5 116 48.3
Manes.01G096000 Manihot esculenta HOM05D006882 ORTHO05D008688 3.3e-18 95.5 117 49.6
Atru.chr8.430 Acer truncatum HOM05D006882 ORTHO05D008688 7.4e-18 94.4 107 52.3
Hma1.2p1_0481F.1_g162213 Hydrangea macrophylla HOM05D006882 ORTHO05D008688 1.3e-17 93.6 111 49.5
RcHm_v2.0_Chr2g0165841 Rosa chinensis HOM05D006882 ORTHO05D008688 1.3e-17 93.6 107 50.5
Potri.004G120200 Populus trichocarpa HOM05D006882 ORTHO05D008688 1.6e-17 93.2 80 61.2
Duzib187G0261 Durio zibethinus HOM05D006882 ORTHO05D008688 2.1e-17 92.8 106 50.9
Gohir.D11G077000 Gossypium hirsutum HOM05D006882 ORTHO05D008688 2.1e-17 92.8 94 51.1
Gorai.007G082700 Gossypium raimondii HOM05D006882 ORTHO05D008688 2.8e-17 92.4 94 51.1
Oeu062161.1 Olea europaea HOM05D006882 ORTHO05D008688 2.8e-17 92.4 118 46.6
TWI60G1503 Tripterygium wilfordii HOM05D006882 ORTHO05D008688 6.2e-17 91.3 116 47.4
Gohir.A11G072700 Gossypium hirsutum HOM05D006882 ORTHO05D008688 1.1e-16 90.5 94 50.0
FAN05G2472 Fragaria x ananassa HOM05D006882 ORTHO05D008688 1.4e-16 90.1 94 53.2
Manes.02G055100 Manihot esculenta HOM05D006882 ORTHO05D008688 2.4e-16 89.4 107 45.8
Rhsim10G0049600 Rhododendron simsii HOM05D006882 ORTHO05D008688 2.4e-16 89.4 107 47.7
FvH4_6g46850 Fragaria vesca HOM05D006882 ORTHO05D008688 4.0e-16 88.6 107 49.5
FAN09G3572 Fragaria x ananassa HOM05D006882 ORTHO05D008688 4.0e-16 88.6 107 49.5
FAN14G0989 Fragaria x ananassa HOM05D006882 ORTHO05D008688 4.0e-16 88.6 107 49.5
THA.LOC104822332 Tarenaya hassleriana HOM05D006882 ORTHO05D008688 6.9e-16 87.8 70 60.0
Dinv33828 Davidia involucrata HOM05D006882 ORTHO05D008688 1.2e-15 87.0 89 55.1
FAN02G1963 Fragaria x ananassa HOM05D006882 ORTHO05D008688 7.6e-15 84.3 107 48.6
Hund13139 Selenicereus undatus HOM05D006882 ORTHO05D008688 1.7e-14 83.2 123 45.5
TWI34G0355 Tripterygium wilfordii HOM05D006882 ORTHO05D008688 1.7e-14 83.2 122 44.3
Cpa.g.sc14.176 Carica papaya HOM05D006882 ORTHO05D008688 2.2e-14 82.8 101 48.5
AT3G02120 Arabidopsis thaliana HOM05D006882 ORTHO05D008688 6.4e-14 81.3 104 46.2
Ciclev10003470m.g Citrus clementina HOM05D006882 ORTHO05D008688 6.4e-14 81.3 122 44.3
Ciclev10013137m.g Citrus clementina HOM05D006882 ORTHO05D008688 1.1e-13 80.5 123 43.1
Sp3g01180 Schrenkiella parvula HOM05D006882 ORTHO05D008688 1.1e-13 80.5 117 44.4
CARHR076080 Cardamine hirsuta HOM05D006882 ORTHO05D008688 1.4e-13 80.1 85 49.4
Ciclev10027312m.g Citrus clementina HOM05D006882 ORTHO05D008688 2.4e-13 79.3 123 43.1
AL3G11350 Arabidopsis lyrata HOM05D006882 ORTHO05D008688 3.2e-13 79.0 103 45.6
Sed0003732 Sechium edule HOM05D006882 ORTHO05D008688 3.2e-13 79.0 97 45.4
Carub.0003s0123 Capsella rubella HOM05D006882 ORTHO05D008688 4.2e-13 78.6 92 47.8
Ciclev10003349m.g Citrus clementina HOM05D006882 ORTHO05D008688 5.5e-13 78.2 124 43.5
Gohir.D09G008650 Gossypium hirsutum HOM05D006882 ORTHO05D008688 7.1e-13 77.8 80 46.2
Aa31LG5G12650 Aethionema arabicum HOM05D006882 ORTHO05D008688 9.3e-13 77.4 65 58.5
arahy.Tifrunner.gnm1.ann1.K9PA59 Arachis hypogaea HOM05D006882 ORTHO05D008688 1.6e-12 76.6 65 60.0
AUR62038673 Chenopodium quinoa HOM05D006882 ORTHO05D008688 1.6e-12 76.6 64 60.9
Aqoxy3G00507 Aquilegia oxysepala HOM05D006882 ORTHO05D008688 2.7e-12 75.9 116 44.0
Gorai.006G010400 Gossypium raimondii HOM05D006882 ORTHO05D008688 3.5e-12 75.5 80 45.0
MSTRG.23884 Avicennia marina HOM05D006882 ORTHO05D008688 7.9e-12 74.3 104 42.3
PSO017G6201 Papaver somniferum HOM05D006882 ORTHO05D008688 7.9e-12 74.3 67 58.2
BraA09t39034Z Brassica rapa HOM05D006882 ORTHO05D008688 1.3e-11 73.6 68 57.4
AUR62018188 Chenopodium quinoa HOM05D006882 ORTHO05D008688 1.3e-11 73.6 64 57.8
DCAR_025431 Daucus carota HOM05D006882 ORTHO05D008688 1.8e-11 73.2 88 44.3
BcaB07g32783 Brassica carinata HOM05D006882 ORTHO05D008688 2.3e-11 72.8 108 44.4
Ah.12g062710 Amaranthus hybridus HOM05D006882 ORTHO05D008688 3.0e-11 72.4 88 46.6
BcaC05g27151 Brassica carinata HOM05D006882 ORTHO05D008688 3.0e-11 72.4 68 55.9
C05p30380 Brassica napus HOM05D006882 ORTHO05D008688 3.0e-11 72.4 68 55.9
BolC5t31777H Brassica oleracea HOM05D006882 ORTHO05D008688 3.0e-11 72.4 68 55.9
PGSC0003DMG400001358 Solanum tuberosum HOM05D006882 ORTHO05D008688 3.0e-11 72.4 58 58.6
Gohir.A09G009600 Gossypium hirsutum HOM05D006882 ORTHO05D008688 3.9e-11 72.0 80 46.2
Sc14g0006330 Simmondsia chinensis HOM05D006882 ORTHO05D008688 5.1e-11 71.6 94 42.6
A09p35030 Brassica napus HOM05D006882 ORTHO05D008688 8.7e-11 70.9 107 43.9
Lsat_1_v5_gn_2_90100 Lactuca sativa HOM05D006882 ORTHO05D008688 8.7e-11 70.9 101 45.5
Migut.H00624 Erythranthe guttata HOM05D006882 ORTHO05D008688 1.5e-10 70.1 93 46.2
ClCG07G016320 Citrullus lanatus HOM05D006882 ORTHO05D008688 1.9e-10 69.7 43 72.1
SalBow1G1386 Salvia bowleyana HOM05D006882 ORTHO05D008688 3.3e-10 68.9 63 55.6
SalBow1G4555 Salvia bowleyana HOM05D006882 ORTHO05D008688 3.3e-10 68.9 63 55.6
MSTRG.2998 Avicennia marina HOM05D006882 ORTHO05D008688 7.4e-10 67.8 94 43.6
CsaV3_4G009150 Cucumis sativus L. HOM05D006882 ORTHO05D008688 1.6e-09 66.6 43 67.4
MBI16_g10826_MAGBIO Magnolia biondii HOM05D006882 ORTHO05D008688 2.1e-09 66.2 60 55.0
Nn1g08730 Nelumbo nucifera HOM05D006882 ORTHO05D008688 2.1e-09 66.2 59 52.5
ATR0177G043 Amborella trichopoda HOM05D006882 ORTHO05D008688 2.8e-09 65.9 61 55.7
Peaxi162Scf00166g00424 Petunia axillaris HOM05D006882 ORTHO05D008688 2.8e-09 65.9 94 42.6
Solyc02g088830.4 Solanum lycopersicum HOM05D006882 ORTHO05D008688 2.8e-09 65.9 53 60.4
ECA238G0863 Erigeron canadensis HOM05D006882 ORTHO05D008688 3.7e-09 65.5 76 48.7
Nitab4.5_0003841g0040 Nicotiana tabacum HOM05D006882 ORTHO05D008688 6.2e-09 64.7 127 35.4
Peaxi162Scf00298g00055 Petunia axillaris HOM05D006882 ORTHO05D008688 6.2e-09 64.7 65 49.2
HanXRQChr07g0199771 Helianthus annuus HOM05D006882 ORTHO05D008688 1.8e-08 63.2 98 41.8
Sopen02g033540 Solanum pennellii HOM05D006882 ORTHO05D008688 2.4e-08 62.8 103 41.7
Mapoly0103s0008 Marchantia polymorpha HOM05D022139 ORTHO05D008688 6.9e-08 61.2 90 41.1
Lsat_1_v5_gn_4_172620 Lactuca sativa HOM05D006882 ORTHO05D048217 9.0e-08 60.8 40 67.5
Peaxi162Scf00254g00028 Petunia axillaris HOM05D006882 ORTHO05D008688 2.0e-07 59.7 55 54.5
CsaV3_5G014380 Cucumis sativus L. HOM05D006882 ORTHO05D008688 4.5e-07 58.5 79 44.3
Peaxi162Scf00329g00037 Petunia axillaris HOM05D006882 ORTHO05D008688 7.6e-07 57.8 70 48.6
Peaxi162Scf00025g00208 Petunia axillaris HOM05D006882 ORTHO05D008688 2.9e-06 55.8 55 52.7


User provided reference genes

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