Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G037200 Phaseolus vulgaris HOM05D007565 ORTHO05D009551 1.3e-82 309.7 153 100.0
VMungo0464G0770 Vigna mungo HOM05D007565 ORTHO05D009551 2.0e-72 275.8 158 88.6
Glyma.19G030200 Glycine max HOM05D007565 ORTHO05D009551 2.5e-62 242.3 153 79.1
Lj2g0002665 Lotus japonicus HOM05D007565 ORTHO05D009551 3.7e-50 201.8 153 69.3
TPR.G10009 Trifolium pratense HOM05D007565 ORTHO05D009551 3.1e-49 198.7 153 69.3
Psat1g068880 Pisum sativum HOM05D007565 ORTHO05D009551 1.0e-47 193.7 151 70.2
Lalb_Chr02g0158911 Lupinus albus HOM05D007565 ORTHO05D009551 3.8e-47 191.8 153 68.6
arahy.Tifrunner.gnm1.ann1.X5N52Z Arachis hypogaea HOM05D007565 ORTHO05D009551 5.5e-46 188.0 154 65.6
arahy.Tifrunner.gnm1.ann1.GE184H Arachis hypogaea HOM05D007565 ORTHO05D009551 1.4e-44 183.3 154 63.6
CiPaw.04G055600 Carya illinoinensis HOM05D007565 ORTHO05D009551 3.3e-38 162.2 111 71.2
Dinv33829 Davidia involucrata HOM05D007565 ORTHO05D009551 2.3e-36 156.0 155 51.0
TWI60G0367 Tripterygium wilfordii HOM05D007565 ORTHO05D009551 3.0e-36 155.6 135 61.5
Gohir.D09G008500 Gossypium hirsutum HOM05D007565 ORTHO05D009551 8.9e-36 154.1 135 61.5
Gorai.006G010200 Gossypium raimondii HOM05D007565 ORTHO05D009551 8.9e-36 154.1 135 61.5
Gohir.A09G009400 Gossypium hirsutum HOM05D007565 ORTHO05D009551 2.0e-35 152.9 135 60.7
Eucgr.I02035 Eucalyptus grandis HOM05D007565 ORTHO05D009551 9.8e-35 150.6 134 59.0
Prupe.3G254800 Prunus persica HOM05D007565 ORTHO05D009551 1.3e-34 150.2 126 64.3
CANSAT64G0913 Cannabis sativa HOM05D007565 ORTHO05D009551 1.7e-34 149.8 112 66.1
Haze_14429 Corylus avellana HOM05D007565 ORTHO05D009551 1.7e-34 149.8 152 53.9
GSVIVG01032907001 Vitis vinifera HOM05D007565 ORTHO05D009551 1.1e-33 147.1 111 64.0
Cfa007669 Carpinus fangiana HOM05D007565 ORTHO05D009551 1.8e-33 146.4 152 53.3
PGR004G0757 Punica granatum HOM05D007565 ORTHO05D009551 1.8e-33 146.4 111 67.6
Manes.01G096100 Manihot esculenta HOM05D007565 ORTHO05D009551 3.2e-33 145.6 134 59.0
Medtr6g015275 Medicago truncatula HOM05D007565 ORTHO05D009551 9.2e-33 144.1 130 64.6
Cc07_g04240 Coffea canephora HOM05D007565 ORTHO05D009551 2.0e-32 142.9 113 64.6
Rhsim08G0074900 Rhododendron simsii HOM05D007565 ORTHO05D009551 2.0e-32 142.9 130 55.4
Atru.chr8.429 Acer truncatum HOM05D007565 ORTHO05D009551 2.7e-32 142.5 110 66.4
TAR371G0975 Trochodendron aralioides HOM05D007565 ORTHO05D009551 2.7e-32 142.5 153 49.7
Medtr6g015250 Medicago truncatula HOM05D007565 ORTHO05D009551 3.5e-32 142.1 133 62.4
Potri.004G120300 Populus trichocarpa HOM05D007565 ORTHO05D009551 4.6e-32 141.7 112 65.2
Sabra04G0069500 Salix brachista HOM05D007565 ORTHO05D009551 4.6e-32 141.7 111 65.8
ECA238G4035 Erigeron canadensis HOM05D007565 ORTHO05D009551 3.0e-31 139.0 115 60.9
CSS0012139 Camellia sinensis var. sinensis HOM05D007565 ORTHO05D009551 5.0e-31 138.3 109 62.4
EL10Ac2g02475 Beta vulgaris HOM05D007565 ORTHO05D009551 8.6e-31 137.5 93 71.0
MD09G1066900 Malus domestica HOM05D007565 ORTHO05D009551 8.6e-31 137.5 110 66.4
Ciclev10012981m.g Citrus clementina HOM05D007565 ORTHO05D009551 1.5e-30 136.7 117 60.7
QL02p067580 Quercus lobata HOM05D007565 ORTHO05D009551 1.5e-30 136.7 88 71.6
CAN.G398.21 Capsicum annuum HOM05D007565 ORTHO05D009551 1.9e-30 136.3 93 71.0
Peaxi162Scf00991g00215 Petunia axillaris HOM05D007565 ORTHO05D009551 2.5e-30 136.0 151 48.3
HanXRQChr07g0199761 Helianthus annuus HOM05D007565 ORTHO05D009551 3.3e-30 135.6 107 63.6
Lsat_1_v5_gn_2_90121 Lactuca sativa HOM05D007565 ORTHO05D009551 3.3e-30 135.6 87 73.6
Nitab4.5_0002957g0030 Nicotiana tabacum HOM05D000753 ORTHO05D003622 3.3e-30 135.6 101 67.3
Actinidia17585 Actinidia chinensis HOM05D007565 ORTHO05D009551 4.3e-30 135.2 112 62.5
ATR0177G044 Amborella trichopoda HOM05D007565 ORTHO05D009551 4.3e-30 135.2 89 73.0
Cpa.g.sc14.177 Carica papaya HOM05D007565 ORTHO05D009551 4.3e-30 135.2 116 62.9
MBI16_g10827_MAGBIO Magnolia biondii HOM05D007565 ORTHO05D009551 4.3e-30 135.2 108 63.9
FvH4_6g46840 Fragaria vesca HOM05D007565 ORTHO05D009551 5.6e-30 134.8 112 65.2
DCAR_025432 Daucus carota HOM05D007565 ORTHO05D009551 7.3e-30 134.4 89 75.3
SalBow1G1387 Salvia bowleyana HOM05D007565 ORTHO05D009551 7.3e-30 134.4 109 59.6
SalBow1G4541 Salvia bowleyana HOM05D007565 ORTHO05D009551 7.3e-30 134.4 109 59.6
PGSC0003DMG400025155 Solanum tuberosum HOM05D007565 ORTHO05D009551 7.3e-30 134.4 88 69.3
Nn4g23433 Nelumbo nucifera HOM05D007565 ORTHO05D009551 1.2e-29 133.7 136 55.9
Solyc02g066920.3 Solanum lycopersicum HOM05D007565 ORTHO05D009551 1.2e-29 133.7 96 66.7
FAN02G0614 Fragaria x ananassa HOM05D007565 ORTHO05D009551 2.1e-29 132.9 93 73.1
FAN09G3824 Fragaria x ananassa HOM05D007565 ORTHO05D009551 2.1e-29 132.9 93 73.1
RcHm_v2.0_Chr2g0165831 Rosa chinensis HOM05D007565 ORTHO05D009551 2.1e-29 132.9 106 67.0
FAN14G1390 Fragaria x ananassa HOM05D007565 ORTHO05D009551 2.8e-29 132.5 93 73.1
Nitab4.5_0000212g0260 Nicotiana tabacum HOM05D000753 ORTHO05D003622 2.8e-29 132.5 88 69.3
EL10Ac2g03143 Beta vulgaris HOM05D007565 ORTHO05D009551 4.7e-29 131.7 79 78.5
FAN05G3080 Fragaria x ananassa HOM05D007565 ORTHO05D009551 4.7e-29 131.7 112 64.3
ClCG07G016310 Citrullus lanatus HOM05D007565 ORTHO05D009551 6.2e-29 131.3 97 67.0
CsaV3_4G009160 Cucumis sativus L. HOM05D007565 ORTHO05D009551 6.2e-29 131.3 112 60.7
vmacro18148 Vaccinium macrocarpon HOM05D007565 ORTHO05D009551 6.2e-29 131.3 112 58.0
Sopen02g016110 Solanum pennellii HOM05D007565 ORTHO05D009551 8.0e-29 131.0 86 68.6
Carub.0007s3671 Capsella rubella HOM05D007565 ORTHO05D009551 1.4e-28 130.2 101 63.4
Aqoxy3G00508 Aquilegia oxysepala HOM05D007565 ORTHO05D009551 1.8e-28 129.8 94 69.1
Sp7g02770 Schrenkiella parvula HOM05D007565 ORTHO05D009551 1.8e-28 129.8 101 64.4
CDE10G0935 Ceratophyllum demersum HOM05D007565 ORTHO05D009551 2.3e-28 129.4 89 69.7
Thhalv10027973m.g Eutrema salsugineum HOM05D007565 ORTHO05D009551 3.1e-28 129.0 97 66.0
AL7G51250 Arabidopsis lyrata HOM05D007565 ORTHO05D009551 4.0e-28 128.6 133 54.1
AUR62018189 Chenopodium quinoa HOM05D007565 ORTHO05D009551 4.0e-28 128.6 91 67.0
AT5G39210 Arabidopsis thaliana HOM05D007565 ORTHO05D009551 5.2e-28 128.3 89 67.4
Aa31LG9G16710 Aethionema arabicum HOM05D007565 ORTHO05D009551 6.8e-28 127.9 105 61.0
Sed0016543 Sechium edule HOM05D007565 ORTHO05D009551 1.2e-27 127.1 97 63.9
AUR62038674 Chenopodium quinoa HOM05D007565 ORTHO05D009551 1.5e-27 126.7 98 62.2
CARHR263200 Cardamine hirsuta HOM05D007565 ORTHO05D009551 2.6e-27 125.9 89 67.4
BcaB06g27735 Brassica carinata HOM05D007565 ORTHO05D009551 5.8e-27 124.8 89 67.4
A04p15530 Brassica napus HOM05D007565 ORTHO05D009551 5.8e-27 124.8 90 65.6
BraA04t17189Z Brassica rapa HOM05D007565 ORTHO05D009551 5.8e-27 124.8 90 65.6
BcaC02g08856 Brassica carinata HOM05D007565 ORTHO05D009551 7.5e-27 124.4 89 66.3
C04p49800 Brassica napus HOM05D007565 ORTHO05D009551 7.5e-27 124.4 89 66.3
BolC4t26571H Brassica oleracea HOM05D007565 ORTHO05D009551 7.5e-27 124.4 89 66.3
PSO478G3761 Papaver somniferum HOM05D007565 ORTHO05D009551 7.5e-27 124.4 111 61.3
unitig_736.g22275 Utricularia gibba HOM05D007565 ORTHO05D009551 1.3e-26 123.6 94 64.9
Migut.H00623 Erythranthe guttata HOM05D007565 ORTHO05D009551 1.7e-26 123.2 87 64.4
MSTRG.2997 Avicennia marina HOM05D007565 ORTHO05D009551 2.2e-26 122.9 89 64.0
COL.COLO4_04935 Corchorus olitorius HOM05D007565 ORTHO05D009551 2.2e-26 122.9 75 74.7
Lju41C3T7 Lonicera japonica HOM05D007565 ORTHO05D009551 2.9e-26 122.5 91 65.9
MELO3C024877.2 Cucumis melo HOM05D007565 ORTHO05D009551 4.9e-26 121.7 93 63.4
THA.LOC104822868 Tarenaya hassleriana HOM05D007565 ORTHO05D009551 8.3e-26 120.9 93 64.5
Os01g0763700 Oryza sativa ssp. japonica HOM05D007565 ORTHO05D009551 1.1e-25 120.6 84 65.5
Mapoly0001s0042 Marchantia polymorpha HOM05D007565 ORTHO05D009551 1.5e-19 100.1 135 39.3
Pp3c15_1410 Physcomitrium patens HOM05D007565 ORTHO05D009551 4.4e-19 98.6 78 55.1
SMO133G0016 Selaginella moellendorffii HOM05D007565 ORTHO05D009551 2.4e-17 92.8 80 55.0
CDE10G1057 Ceratophyllum demersum HOM05D000058 ORTHO05D000077 1.6e-16 90.1 113 45.1
SEGI_38587 Sequoiadendron giganteum HOM05D007565 ORTHO05D009551 2.1e-16 89.7 123 41.5
BcaC02g08855 Brassica carinata HOM05D007565 ORTHO05D009551 3.5e-16 89.0 89 55.1
BcaC02g08857 Brassica carinata HOM05D007565 ORTHO05D009551 3.5e-16 89.0 89 55.1
AagrBONN_evm.TU.Sc2ySwM_362.2072 Anthoceros agrestis HOM05D007565 ORTHO05D009551 1.3e-15 87.0 78 51.3
TPR.G36332 Trifolium pratense HOM05D007565 ORTHO05D009551 7.3e-14 81.3 48 79.2
MBI19_g17444_MAGBIO Magnolia biondii HOM05D000545 ORTHO05D000539 5.4e-09 65.1 63 58.7


User provided reference genes

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