Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G035200 Phaseolus vulgaris HOM05D007413 ORTHO05D009357 7.7e-62 240.4 126 100.0
VMungo0464G1276 Vigna mungo HOM05D007413 ORTHO05D009357 2.1e-43 179.1 128 80.5
Glyma.13G057000 Glycine max HOM05D007413 ORTHO05D009357 3.3e-28 128.6 128 62.5
Lalb_Chr06g0174991 Lupinus albus HOM05D007413 ORTHO05D009357 6.9e-18 94.4 126 52.4
TPR.G10008 Trifolium pratense HOM05D007413 ORTHO05D009357 1.7e-16 89.7 122 50.8
Psat1g067640 Pisum sativum HOM05D007413 ORTHO05D009357 3.8e-16 88.6 113 49.6
Lj2g0007962 Lotus japonicus HOM05D007413 ORTHO05D009357 4.6e-14 81.6 127 49.6
Lalb_Chr02g0158971 Lupinus albus HOM05D007413 ORTHO05D009357 4.6e-14 81.6 109 52.3
Potri.017G093000 Populus trichocarpa HOM05D007413 ORTHO05D009357 6.0e-14 81.3 110 50.0
QL02p067998 Quercus lobata HOM05D007413 ORTHO05D009357 1.7e-13 79.7 76 56.6
Sabra17G0082000 Salix brachista HOM05D007413 ORTHO05D009357 1.7e-13 79.7 119 46.2
Cfa007655 Carpinus fangiana HOM05D007413 ORTHO05D009357 3.0e-13 79.0 101 52.5
Thecc.04G093400 Theobroma cacao HOM05D007413 ORTHO05D009357 8.7e-13 77.4 111 43.2
Sabra04G0069100 Salix brachista HOM05D007413 ORTHO05D009357 2.5e-12 75.9 69 62.3
FAN09G1793 Fragaria x ananassa HOM05D007413 ORTHO05D009357 3.3e-12 75.5 110 45.5
FAN02G2783 Fragaria x ananassa HOM05D007413 ORTHO05D009357 5.6e-12 74.7 110 44.5
Medtr6g015150 Medicago truncatula HOM05D007413 ORTHO05D009357 7.4e-12 74.3 66 60.6
Eucgr.I02025 Eucalyptus grandis HOM05D007413 ORTHO05D009357 9.6e-12 73.9 56 66.1
FAN05G2048 Fragaria x ananassa HOM05D007413 ORTHO05D009357 1.3e-11 73.6 110 45.5
Nitab4.5_0010051g0020 Nicotiana tabacum HOM05D007413 ORTHO05D009357 1.3e-11 73.6 78 50.0
Sp7g02750 Schrenkiella parvula HOM05D007413 ORTHO05D009357 1.6e-11 73.2 97 48.5
Ciclev10013609m.g Citrus clementina HOM05D007413 ORTHO05D009357 2.1e-11 72.8 128 42.2
Manes.02G054200 Manihot esculenta HOM05D007413 ORTHO05D009357 2.1e-11 72.8 119 39.5
Oeu062157.1 Olea europaea HOM05D007413 ORTHO05D009357 2.1e-11 72.8 98 46.9
Potri.004G119600 Populus trichocarpa HOM05D007413 ORTHO05D009357 2.1e-11 72.8 113 49.6
FvH4_6g47010 Fragaria vesca HOM05D007413 ORTHO05D009357 2.8e-11 72.4 106 44.3
FAN14G4532 Fragaria x ananassa HOM05D007413 ORTHO05D009357 2.8e-11 72.4 106 44.3
Cpa.g.sc3362.1 Carica papaya HOM05D007413 ORTHO05D009357 3.6e-11 72.0 68 57.4
Manes.01G097200 Manihot esculenta HOM05D007413 ORTHO05D009357 4.8e-11 71.6 121 48.8
Nitab4.5_0000565g0230 Nicotiana tabacum HOM05D007413 ORTHO05D009357 4.8e-11 71.6 65 55.4
CAN.G206.219 Capsicum annuum HOM05D007413 ORTHO05D009357 6.2e-11 71.2 57 63.2
Migut.K01283 Erythranthe guttata HOM05D007413 ORTHO05D009357 6.2e-11 71.2 102 44.1
Sopen02g033450 Solanum pennellii HOM05D007413 ORTHO05D009357 8.1e-11 70.9 57 64.9
Cc07_g04120 Coffea canephora HOM05D007413 ORTHO05D009357 1.1e-10 70.5 97 45.4
RcHm_v2.0_Chr2g0166071 Rosa chinensis HOM05D007413 ORTHO05D009357 1.1e-10 70.5 75 54.7
SalBow1G6503 Salvia bowleyana HOM05D007413 ORTHO05D009357 1.1e-10 70.5 62 56.5
CiPaw.03G089400 Carya illinoinensis HOM05D007413 ORTHO05D009357 1.4e-10 70.1 114 46.5
Solyc02g088740.1 Solanum lycopersicum HOM05D007413 ORTHO05D009357 1.4e-10 70.1 57 64.9
CANSAT64G0406 Cannabis sativa HOM05D007413 ORTHO05D009357 1.8e-10 69.7 114 46.5
Lsat_1_v5_gn_2_87601 Lactuca sativa HOM05D007413 ORTHO05D009357 1.8e-10 69.7 123 41.5
COL.COLO4_00052 Corchorus olitorius HOM05D007413 ORTHO05D009357 3.1e-10 68.9 71 53.5
ClCG11G004700 Citrullus lanatus HOM05D007413 ORTHO05D009357 4.0e-10 68.6 117 41.9
CSS0009905 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 9.0e-10 67.4 118 42.4
CSS0018085 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 9.0e-10 67.4 118 42.4
SalBow1G0329 Salvia bowleyana HOM05D007413 ORTHO05D009357 9.0e-10 67.4 62 56.5
Carub.0007s3668 Capsella rubella HOM05D007413 ORTHO05D009357 1.5e-09 66.6 91 46.2
Lalb_Chr21g0318381 Lupinus albus HOM05D007413 ORTHO05D009357 1.5e-09 66.6 116 44.0
TWI34G0597 Tripterygium wilfordii HOM05D007413 ORTHO05D009357 3.4e-09 65.5 119 40.3
BcaC02g09685 Brassica carinata HOM05D007413 ORTHO05D009357 4.5e-09 65.1 120 40.8
C04p45600 Brassica napus HOM05D007413 ORTHO05D009357 4.5e-09 65.1 120 40.8
BolC4t26142H Brassica oleracea HOM05D007413 ORTHO05D009357 4.5e-09 65.1 120 40.8
BcaB06g27281 Brassica carinata HOM05D007413 ORTHO05D009357 5.8e-09 64.7 120 42.5
Aqoxy3G03598 Aquilegia oxysepala HOM05D007413 ORTHO05D009357 7.6e-09 64.3 100 46.0
Actinidia26249 Actinidia chinensis HOM05D007413 ORTHO05D009357 9.9e-09 63.9 71 49.3
CAN.G398.10 Capsicum annuum HOM05D007413 ORTHO05D009357 9.9e-09 63.9 80 45.0
PGR004G0469 Punica granatum HOM05D007413 ORTHO05D009357 9.9e-09 63.9 78 47.4
Migut.H00635 Erythranthe guttata HOM05D007413 ORTHO05D009357 1.3e-08 63.5 92 42.4
Thhalv10027993m.g Eutrema salsugineum HOM05D007413 ORTHO05D009357 1.3e-08 63.5 79 46.8
A04p11950 Brassica napus HOM05D007413 ORTHO05D009357 1.7e-08 63.2 120 40.0
BraA04t16860Z Brassica rapa HOM05D007413 ORTHO05D009357 1.7e-08 63.2 120 40.0
AL7G51220 Arabidopsis lyrata HOM05D007413 ORTHO05D009357 2.2e-08 62.8 72 48.6
MD17G1057900 Malus domestica HOM05D007413 ORTHO05D009357 2.2e-08 62.8 96 46.9
Nn3g17420 Nelumbo nucifera HOM05D007413 ORTHO05D009357 2.2e-08 62.8 91 46.2
Hma1.2p1_0481F.1_g162070 Hydrangea macrophylla HOM05D007413 ORTHO05D009357 2.9e-08 62.4 114 38.6
Gohir.A05G371900 Gossypium hirsutum HOM05D007413 ORTHO05D009357 4.9e-08 61.6 113 33.6
Gorai.012G049200 Gossypium raimondii HOM05D007413 ORTHO05D009357 4.9e-08 61.6 113 33.6
Oeu007062.1 Olea europaea HOM05D007413 ORTHO05D009357 4.9e-08 61.6 91 45.1
Prupe.3G256400 Prunus persica HOM05D007413 ORTHO05D009357 4.9e-08 61.6 68 50.0
Sed0019528 Sechium edule HOM05D007413 ORTHO05D009357 4.9e-08 61.6 66 50.0
Glyma.19G029200 Glycine max HOM05D007413 ORTHO05D009357 6.4e-08 61.2 105 47.6
Lsat_1_v5_gn_4_171221 Lactuca sativa HOM05D007413 ORTHO05D009357 6.4e-08 61.2 120 39.2
Sopen02g016170 Solanum pennellii HOM05D007413 ORTHO05D009357 6.4e-08 61.2 62 50.0
AT5G39240 Arabidopsis thaliana HOM05D007413 ORTHO05D009357 8.4e-08 60.8 76 46.1
Gohir.D04G043900 Gossypium hirsutum HOM05D007413 ORTHO05D009357 8.4e-08 60.8 113 33.6
MD09G1064600 Malus domestica HOM05D007413 ORTHO05D009357 8.4e-08 60.8 112 40.2
unitig_62.g23378 Utricularia gibba HOM05D007413 ORTHO05D009357 8.4e-08 60.8 79 45.6
Duzib147G0133 Durio zibethinus HOM05D007413 ORTHO05D009357 1.4e-07 60.1 108 40.7
Oeu010247.1 Olea europaea HOM05D007413 ORTHO05D009357 1.4e-07 60.1 112 42.9
CARHR263170 Cardamine hirsuta HOM05D007413 ORTHO05D009357 1.9e-07 59.7 81 43.2
MELO3C024851.2 Cucumis melo HOM05D007413 ORTHO05D009357 1.9e-07 59.7 92 43.5
Aa31LG9G16690 Aethionema arabicum HOM05D007413 ORTHO05D009357 4.2e-07 58.5 72 50.0
Nn4g23392 Nelumbo nucifera HOM05D007413 ORTHO05D009357 4.2e-07 58.5 100 43.0
Solyc02g066970.1 Solanum lycopersicum HOM05D007413 ORTHO05D009357 9.3e-07 57.4 105 37.1
ATR0064G025 Amborella trichopoda HOM05D007413 ORTHO05D009357 1.2e-06 57.0 86 41.9
DCAR_011043 Daucus carota HOM05D007413 ORTHO05D009357 1.2e-06 57.0 116 36.2
SGA_v2.0_scaffold52G19169 Striga asiatica HOM05D007413 ORTHO05D009357 1.6e-06 56.6 98 38.8
MELO3C022028.2 Cucumis melo HOM05D007413 ORTHO05D009357 2.1e-06 56.2 116 37.1
Aa31LG2G3920 Aethionema arabicum HOM05D007413 ORTHO05D009357 2.7e-06 55.8 112 37.5
SGA_v2.0_scaffold148G36473 Striga asiatica HOM05D007413 ORTHO05D009357 2.7e-06 55.8 55 52.7
AT3G29370 Arabidopsis thaliana HOM05D007413 ORTHO05D009357 3.5e-06 55.5 102 38.2
CDE10G0699 Ceratophyllum demersum HOM05D007413 ORTHO05D009357 4.6e-06 55.1 117 34.2
CSS0018963 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 6.0e-06 54.7 105 39.0
Nitab4.5_0005916g0020 Nicotiana tabacum HOM05D007413 ORTHO05D009357 7.9e-06 54.3 98 41.8


User provided reference genes

Program Settings