Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G033900 Phaseolus vulgaris HOM05D006982 ORTHO05D008909 3.2e-98 361.7 176 100.0
VMungo0464G0061 Vigna mungo HOM05D006982 ORTHO05D008909 2.0e-95 352.4 176 96.0
Glyma.13G058700 Glycine max HOM05D006982 ORTHO05D008909 3.2e-82 308.5 170 88.8
Glyma.19G027800 Glycine max HOM05D006982 ORTHO05D008909 1.7e-78 296.2 166 86.7
TPR.G26172 Trifolium pratense HOM05D006982 ORTHO05D008909 2.2e-78 295.8 173 82.7
Lj2g0023544 Lotus japonicus HOM05D006982 ORTHO05D008909 3.1e-77 292.0 166 84.9
Psat1g070160 Pisum sativum HOM05D006982 ORTHO05D008909 1.0e-75 287.0 172 81.4
Lalb_Chr02g0159031 Lupinus albus HOM05D006982 ORTHO05D008909 1.8e-72 276.2 166 82.5
Atru.chr8.390 Acer truncatum HOM05D006982 ORTHO05D008909 2.0e-71 272.7 155 81.3
CiPaw.03G091200 Carya illinoinensis HOM05D006982 ORTHO05D008909 2.0e-71 272.7 166 77.7
Haze_14468 Corylus avellana HOM05D006982 ORTHO05D008909 3.4e-71 271.9 166 77.7
GSVIVG01011493001 Vitis vinifera HOM05D006982 ORTHO05D008909 6.3e-70 267.7 170 74.7
Potri.017G090400 Populus trichocarpa HOM05D006982 ORTHO05D008909 8.3e-70 267.3 168 76.8
Hma1.2p1_1813F.1_g303760 Hydrangea macrophylla HOM05D006982 ORTHO05D008909 1.4e-69 266.5 160 77.5
Hma1.2p1_3044F.1_g332060 Hydrangea macrophylla HOM05D006982 ORTHO05D008909 4.1e-69 265.0 160 76.9
Dinv11484 Davidia involucrata HOM05D006982 ORTHO05D008909 5.4e-69 264.6 156 76.9
AUR62042567 Chenopodium quinoa HOM05D006982 ORTHO05D008909 9.1e-69 263.8 169 74.6
QL02p039506 Quercus lobata HOM05D006982 ORTHO05D008909 9.1e-69 263.8 166 75.3
Thhalv10005014m.g Eutrema salsugineum HOM05D006982 ORTHO05D008909 2.0e-68 262.7 174 71.8
Sp2g17880 Schrenkiella parvula HOM05D006982 ORTHO05D008909 2.7e-68 262.3 174 71.8
CANSAT64G0008 Cannabis sativa HOM05D006982 ORTHO05D008909 4.5e-68 261.5 169 72.8
A06p40000 Brassica napus HOM05D006982 ORTHO05D008909 7.7e-68 260.8 167 74.9
Aa31LG2G3980 Aethionema arabicum HOM05D006982 ORTHO05D008909 1.0e-67 260.4 169 73.4
Sc11g0004740 Simmondsia chinensis HOM05D006982 ORTHO05D008909 1.0e-67 260.4 158 78.5
AL5G19280 Arabidopsis lyrata HOM05D006982 ORTHO05D008909 1.3e-67 260.0 177 70.1
Carub.0005s0799 Capsella rubella HOM05D006982 ORTHO05D008909 1.3e-67 260.0 177 70.6
BcaB07g30087 Brassica carinata HOM05D006982 ORTHO05D008909 2.9e-67 258.8 171 72.5
Manes.01G098700 Manihot esculenta HOM05D006982 ORTHO05D008909 2.9e-67 258.8 167 73.7
Thecc.04G091200 Theobroma cacao HOM05D006982 ORTHO05D008909 2.9e-67 258.8 164 74.4
Eucgr.I01983 Eucalyptus grandis HOM05D006982 ORTHO05D008909 8.6e-67 257.3 168 72.6
AT3G29280 Arabidopsis thaliana HOM05D006982 ORTHO05D008909 1.1e-66 256.9 166 72.9
Duzib187G0332 Durio zibethinus HOM05D006982 ORTHO05D008909 1.1e-66 256.9 174 70.1
A02p36510 Brassica napus HOM05D006982 ORTHO05D008909 1.9e-66 256.1 171 71.3
CARHR292480 Cardamine hirsuta HOM05D006982 ORTHO05D008909 5.5e-66 254.6 170 71.2
MELO3C014935.2 Cucumis melo HOM05D006982 ORTHO05D008909 5.5e-66 254.6 157 74.5
THA.LOC104805498 Tarenaya hassleriana HOM05D006982 ORTHO05D008909 5.5e-66 254.6 162 71.6
BraA02t08647Z Brassica rapa HOM05D006982 ORTHO05D008909 7.2e-66 254.2 167 71.9
CsaV3_3G026330 Cucumis sativus L. HOM05D006982 ORTHO05D008909 7.2e-66 254.2 154 75.3
Ciclev10012958m.g Citrus clementina HOM05D006982 ORTHO05D008909 9.5e-66 253.8 159 74.8
Rhsim10G0045300 Rhododendron simsii HOM05D006982 ORTHO05D008909 1.2e-65 253.4 160 72.5
BolC2t11604H Brassica oleracea HOM05D006982 ORTHO05D008909 1.6e-65 253.1 172 70.3
BolC7t44339H Brassica oleracea HOM05D006982 ORTHO05D008909 1.6e-65 253.1 171 70.2
Nn4g23351 Nelumbo nucifera HOM05D006982 ORTHO05D008909 2.1e-65 252.7 170 71.8
Sed0004734 Sechium edule HOM05D006982 ORTHO05D008909 2.1e-65 252.7 152 76.3
TAR629G3328 Trochodendron aralioides HOM05D006982 ORTHO05D008909 2.8e-65 252.3 166 71.1
C02p55480 Brassica napus HOM05D006982 ORTHO05D008909 4.7e-65 251.5 171 70.2
BcaC03g17569 Brassica carinata HOM05D006982 ORTHO05D008909 6.1e-65 251.1 176 68.8
Cc07_g04010 Coffea canephora HOM05D006982 ORTHO05D008909 1.0e-64 250.4 156 73.1
PGR004G0184 Punica granatum HOM05D006982 ORTHO05D008909 1.4e-64 250.0 166 70.5
EL10Ac2g03084 Beta vulgaris HOM05D006982 ORTHO05D008909 4.0e-64 248.4 170 68.8
SGA_v2.0_scaffold4G02409 Striga asiatica HOM05D006982 ORTHO05D008909 4.0e-64 248.4 167 68.9
Gohir.D09G010400 Gossypium hirsutum HOM05D006982 ORTHO05D008909 5.2e-64 248.1 165 70.9
Gorai.006G012000 Gossypium raimondii HOM05D006982 ORTHO05D008909 6.8e-64 247.7 161 72.7
HanXRQChr07g0199461 Helianthus annuus HOM05D006982 ORTHO05D008909 2.0e-63 246.1 157 72.6
TWI60G0050 Tripterygium wilfordii HOM05D006982 ORTHO05D008909 2.0e-63 246.1 170 69.4
ClCG05G014130 Citrullus lanatus HOM05D006982 ORTHO05D008909 5.7e-63 244.6 154 72.7
FvH4_6g47420 Fragaria vesca HOM05D006982 ORTHO05D008909 1.3e-62 243.4 167 70.7
FAN14G3321 Fragaria x ananassa HOM05D006982 ORTHO05D008909 1.3e-62 243.4 167 70.7
Nitab4.5_0005196g0040 Nicotiana tabacum HOM05D006982 ORTHO05D008909 1.3e-62 243.4 168 69.6
MD09G1061600 Malus domestica HOM05D006982 ORTHO05D008909 2.2e-62 242.7 167 71.3
Sabra17G0079600 Salix brachista HOM05D006982 ORTHO05D008909 2.8e-62 242.3 206 60.7
SalBow1G5236 Salvia bowleyana HOM05D006982 ORTHO05D008909 2.8e-62 242.3 168 66.1
vmacro05662 Vaccinium macrocarpon HOM05D006982 ORTHO05D008909 2.8e-62 242.3 161 69.6
Nitab4.5_0001637g0060 Nicotiana tabacum HOM05D006982 ORTHO05D008909 4.9e-62 241.5 164 69.5
MSTRG.3019 Avicennia marina HOM05D006982 ORTHO05D008909 8.3e-62 240.7 176 65.9
FAN09G4389 Fragaria x ananassa HOM05D006982 ORTHO05D008909 8.3e-62 240.7 167 70.1
RcHm_v2.0_Chr2g0166501 Rosa chinensis HOM05D006982 ORTHO05D008909 1.1e-61 240.4 167 68.9
Aqoxy3G00454 Aquilegia oxysepala HOM05D006982 ORTHO05D008909 2.4e-61 239.2 155 71.0
Migut.H00650 Erythranthe guttata HOM05D006982 ORTHO05D008909 3.1e-61 238.8 169 66.9
FAN02G3418 Fragaria x ananassa HOM05D006982 ORTHO05D008909 4.1e-61 238.4 167 69.5
RcHm_v2.0_Chr2g0166491 Rosa chinensis HOM05D006982 ORTHO05D008909 4.1e-61 238.4 167 70.1
Lsat_1_v5_gn_2_87800 Lactuca sativa HOM05D006982 ORTHO05D008909 5.4e-61 238.0 168 68.5
ECA238G0675 Erigeron canadensis HOM05D006982 ORTHO05D008909 7.8e-60 234.2 161 67.1
CAN.G734.5 Capsicum annuum HOM05D006982 ORTHO05D008909 1.7e-59 233.0 160 68.8
Cpa.g.sc14.148 Carica papaya HOM05D006982 ORTHO05D008909 2.9e-59 232.3 134 79.9
Zm00001eb011170 Zea mays HOM05D006982 ORTHO05D008909 3.8e-59 231.9 155 69.7
BraA06t26915Z Brassica rapa HOM05D006982 ORTHO05D008909 5.0e-59 231.5 148 74.3
Medtr6g013815 Medicago truncatula HOM05D006982 ORTHO05D008909 5.0e-59 231.5 125 86.4
ATR0064G116 Amborella trichopoda HOM05D006982 ORTHO05D008909 6.6e-59 231.1 157 68.2
Actinidia07827 Actinidia chinensis HOM05D006982 ORTHO05D008909 8.6e-59 230.7 148 70.3
Os03g0257000 Oryza sativa ssp. japonica HOM05D006982 ORTHO05D008909 8.6e-59 230.7 175 64.0
Os03g0209700 Oryza sativa ssp. japonica HOM05D006982 ORTHO05D008909 3.3e-58 228.8 172 64.5
PSO017G1487 Papaver somniferum HOM05D006982 ORTHO05D008909 4.3e-58 228.4 153 69.9
Sopen03g016600 Solanum pennellii HOM05D006982 ORTHO05D008909 5.6e-58 228.0 170 63.5
PSO478G0313 Papaver somniferum HOM05D006982 ORTHO05D008909 8.0e-57 224.2 159 66.7
Solyc03g013250.4 Solanum lycopersicum HOM05D006982 ORTHO05D008909 1.4e-56 223.4 157 65.0
Hund13166 Selenicereus undatus HOM05D006982 ORTHO05D008909 5.2e-56 221.5 173 67.1
Prupe.3G258600 Prunus persica HOM05D006982 ORTHO05D008909 1.5e-55 219.9 165 65.5
Gohir.A09G011401 Gossypium hirsutum HOM05D006982 ORTHO05D008909 6.6e-51 204.5 182 59.3
SEGI_41437 Sequoiadendron giganteum HOM05D006982 ORTHO05D008909 4.3e-50 201.8 155 57.4
Ah.10g031970 Amaranthus hybridus HOM05D006982 ORTHO05D008909 7.3e-50 201.1 169 60.9
COL.COLO4_21380 Corchorus olitorius HOM05D006982 ORTHO05D008909 1.8e-48 196.4 124 70.2
SMO164G0193 Selaginella moellendorffii HOM05D006982 ORTHO05D008909 3.1e-48 195.7 147 59.2
CDE04G2259 Ceratophyllum demersum HOM05D006982 ORTHO05D008909 5.8e-47 191.4 125 68.0
Lj4A116T80 Lonicera japonica HOM05D006982 ORTHO05D008909 5.8e-47 191.4 122 71.3
BolC2t11598H Brassica oleracea HOM05D006982 ORTHO05D008909 8.3e-46 187.6 132 67.4
arahy.Tifrunner.gnm1.ann1.84WVAW Arachis hypogaea HOM05D006982 ORTHO05D008909 1.9e-42 176.4 157 61.1
Pp3c21_18720 Physcomitrium patens HOM05D006982 ORTHO05D008909 3.3e-42 175.6 155 53.5
Peaxi162Scf00451g00425 Petunia axillaris HOM05D006982 ORTHO05D008909 9.5e-42 174.1 167 55.7
arahy.Tifrunner.gnm1.ann1.NGZQ86 Arachis hypogaea HOM05D006982 ORTHO05D008909 1.6e-41 173.3 160 61.2
unitig_899.g15159 Utricularia gibba HOM05D006982 ORTHO05D008909 2.0e-39 166.4 153 56.9
C07p38170 Brassica napus HOM05D006982 ORTHO05D008909 4.6e-36 155.2 112 65.2
SHI03750 Sapria himalayana HOM05D000002 ORTHO05D000001 2.4e-32 142.9 92 68.5
FAN05G3993 Fragaria x ananassa HOM05D006982 ORTHO05D008909 1.9e-29 133.3 100 68.0
C02p55410 Brassica napus HOM05D006982 ORTHO05D008909 1.7e-27 126.7 114 57.0
CSS0035536 Camellia sinensis var. sinensis HOM05D006982 ORTHO05D008909 3.0e-27 125.9 77 70.1
TPR.G3955 Trifolium pratense HOM05D006982 ORTHO05D008909 2.8e-25 119.4 71 80.3
AUR62018155 Chenopodium quinoa HOM05D006982 ORTHO05D008909 2.0e-15 86.7 54 72.2
CSS0038093 Camellia sinensis var. sinensis HOM05D006982 ORTHO05D008909 3.9e-11 72.4 44 75.0
AUR62006323 Chenopodium quinoa HOM05D003441 ORTHO05D044017 1.6e-09 67.0 70 51.4
Medtr6g013805 Medicago truncatula HOM05D006982 ORTHO05D008909 6.2e-09 65.1 43 72.1
PGSC0003DMG400033554 Solanum tuberosum HOM05D006982 ORTHO05D008909 6.2e-09 65.1 43 67.4
TPR.G26213 Trifolium pratense HOM05D006982 ORTHO05D008909 2.4e-08 63.2 46 65.2
Lj4A116T81 Lonicera japonica HOM05D006982 ORTHO05D008909 3.1e-08 62.8 43 69.8
SHI03749 Sapria himalayana HOM05D006982 ORTHO05D000001 4.0e-08 62.4 32 78.1


User provided reference genes

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