Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G032600 Phaseolus vulgaris HOM05D006506 ORTHO05D007809 3.8e-174 614.8 319 100.0
VMungo0464G1487 Vigna mungo HOM05D006506 ORTHO05D007809 2.5e-165 585.5 321 94.4
Glyma.13G059800 Glycine max HOM05D006506 ORTHO05D007809 8.0e-156 553.9 320 89.7
Lj2g0016250 Lotus japonicus HOM05D006506 ORTHO05D007809 1.3e-145 520.0 322 81.1
Psat1g070040 Pisum sativum HOM05D006506 ORTHO05D007809 1.6e-143 513.1 319 79.9
Ca_04862_v3 Cicer arietinum L. HOM05D006506 ORTHO05D007809 4.6e-143 511.5 320 80.6
Medtr1g082730 Medicago truncatula HOM05D006506 ORTHO05D007809 1.5e-141 506.5 319 78.7
Lalb_Chr06g0175141 Lupinus albus HOM05D006506 ORTHO05D007809 3.3e-141 505.4 326 79.1
TPR.G16552 Trifolium pratense HOM05D006506 ORTHO05D007809 3.1e-139 498.8 319 77.4
arahy.Tifrunner.gnm1.ann1.9QS0XN Arachis hypogaea HOM05D006506 ORTHO05D007809 6.8e-139 497.7 320 79.4
Thecc.06G030600 Theobroma cacao HOM05D006506 ORTHO05D007809 2.0e-138 496.1 317 77.3
Duzib160G0598 Durio zibethinus HOM05D006506 ORTHO05D007809 2.6e-138 495.7 320 75.9
Duzib160G0645 Durio zibethinus HOM05D006506 ORTHO05D007809 3.4e-138 495.4 320 76.2
Prupe.3G090200 Prunus persica HOM05D006506 ORTHO05D007809 4.4e-138 495.0 320 76.9
arahy.Tifrunner.gnm1.ann1.SP1H5F Arachis hypogaea HOM05D006506 ORTHO05D007809 7.5e-138 494.2 320 78.8
COL.COLO4_11906 Corchorus olitorius HOM05D006506 ORTHO05D007809 7.5e-138 494.2 320 76.9
MELO3C023430.2 Cucumis melo HOM05D006506 ORTHO05D007809 9.8e-138 493.8 320 77.5
MD17G1214300 Malus domestica HOM05D006506 ORTHO05D007809 3.7e-137 491.9 320 75.9
Haze_13452 Corylus avellana HOM05D006506 ORTHO05D007809 4.9e-137 491.5 320 76.9
CsaV3_7G032300 Cucumis sativus L. HOM05D006506 ORTHO05D007809 6.4e-137 491.1 320 77.2
Cfa001948 Carpinus fangiana HOM05D006506 ORTHO05D007809 9.2e-136 487.3 320 75.9
Gohir.A06G107700 Gossypium hirsutum HOM05D006506 ORTHO05D007809 1.2e-135 486.9 320 75.9
Gohir.D06G120300 Gossypium hirsutum HOM05D006506 ORTHO05D007809 2.1e-135 486.1 320 75.6
Dinv38132 Davidia involucrata HOM05D006506 ORTHO05D007809 4.6e-135 485.0 328 74.1
Sed0005275 Sechium edule HOM05D006506 ORTHO05D007809 4.6e-135 485.0 320 75.6
Cpa.g.sc67.28 Carica papaya HOM05D006506 ORTHO05D007809 6.0e-135 484.6 320 75.3
TWI75G0153 Tripterygium wilfordii HOM05D006506 ORTHO05D007809 6.0e-135 484.6 320 74.1
CiPaw.01G249400 Carya illinoinensis HOM05D006506 ORTHO05D007809 7.8e-135 484.2 320 75.9
Gorai.010G138400 Gossypium raimondii HOM05D006506 ORTHO05D007809 7.8e-135 484.2 320 75.3
DCAR_021353 Daucus carota HOM05D006506 ORTHO05D007809 2.3e-134 482.6 326 73.9
CSS0043074 Camellia sinensis var. sinensis HOM05D006506 ORTHO05D007809 3.0e-134 482.3 327 73.1
Ciclev10026100m.g Citrus clementina HOM05D006506 ORTHO05D007809 5.1e-134 481.5 319 75.2
CSS0005655 Camellia sinensis var. sinensis HOM05D006506 ORTHO05D007809 1.1e-133 480.3 327 72.8
CANSAT56G2592 Cannabis sativa HOM05D006506 ORTHO05D007809 7.3e-133 477.6 318 74.8
Actinidia15748 Actinidia chinensis HOM05D006506 ORTHO05D007809 9.5e-133 477.2 327 72.2
GSVIVG01017366001 Vitis vinifera HOM05D006506 ORTHO05D007809 9.5e-133 477.2 322 73.3
Rhsim08G0211600 Rhododendron simsii HOM05D006506 ORTHO05D007809 6.2e-132 474.6 327 72.2
ECA232G3059 Erigeron canadensis HOM05D006506 ORTHO05D007809 1.4e-131 473.4 321 72.6
AL1G60780 Arabidopsis lyrata HOM05D006506 ORTHO05D007809 1.8e-131 473.0 320 73.1
BcaB02g10986 Brassica carinata HOM05D006506 ORTHO05D007809 1.8e-131 473.0 320 73.1
AT1G52530 Arabidopsis thaliana HOM05D006506 ORTHO05D007809 2.3e-131 472.6 320 73.1
Carub.0001s4149 Capsella rubella HOM05D006506 ORTHO05D007809 2.3e-131 472.6 320 73.1
Potri.001G201700 Populus trichocarpa HOM05D006506 ORTHO05D007809 2.3e-131 472.6 320 73.1
Thhalv10011665m.g Eutrema salsugineum HOM05D006506 ORTHO05D007809 5.2e-131 471.5 320 72.5
vmacro19011 Vaccinium macrocarpon HOM05D006506 ORTHO05D007809 5.2e-131 471.5 324 72.5
BraA05t20791Z Brassica rapa HOM05D006506 ORTHO05D007809 6.8e-131 471.1 320 73.1
Sp1g39080 Schrenkiella parvula HOM05D006506 ORTHO05D007809 6.8e-131 471.1 320 72.8
A05p18940 Brassica napus HOM05D006506 ORTHO05D007809 8.9e-131 470.7 320 73.1
CARHR042650 Cardamine hirsuta HOM05D006506 ORTHO05D007809 8.9e-131 470.7 320 73.4
Lsat_1_v5_gn_4_87520 Lactuca sativa HOM05D006506 ORTHO05D007809 1.5e-130 469.9 323 73.1
Sabra01G0159300 Salix brachista HOM05D006506 ORTHO05D007809 2.0e-130 469.5 320 72.5
BcaC08g44001 Brassica carinata HOM05D006506 ORTHO05D007809 2.6e-130 469.2 320 73.1
Aa31LG10G2470 Aethionema arabicum HOM05D006506 ORTHO05D007809 5.8e-130 468.0 320 71.9
C06p14060 Brassica napus HOM05D006506 ORTHO05D007809 7.6e-130 467.6 320 72.8
BolC6t36584H Brassica oleracea HOM05D006506 ORTHO05D007809 7.6e-130 467.6 320 72.8
HanXRQChr16g0500351 Helianthus annuus HOM05D006506 ORTHO05D007809 1.7e-129 466.5 325 72.0
FAN14G4998 Fragaria x ananassa HOM05D000001 ORTHO05D007809 2.2e-129 466.1 320 72.2
TAR371G0436 Trochodendron aralioides HOM05D006506 ORTHO05D007809 3.7e-129 465.3 321 72.3
FvH4_6g29440 Fragaria vesca HOM05D006506 ORTHO05D007809 8.3e-129 464.2 320 71.9
Peaxi162Scf00553g00510 Petunia axillaris HOM05D006506 ORTHO05D007809 8.3e-129 464.2 328 71.3
FAN02G0099 Fragaria x ananassa HOM05D006506 ORTHO05D007809 1.9e-128 463.0 320 71.9
RcHm_v2.0_Chr2g0134931 Rosa chinensis HOM05D006506 ORTHO05D007809 2.4e-128 462.6 320 71.9
SHI11239 Sapria himalayana HOM05D006506 ORTHO05D007809 2.4e-128 462.6 322 70.5
FAN05G2665 Fragaria x ananassa HOM05D000001 ORTHO05D007809 3.2e-128 462.2 320 71.9
FAN09G0903 Fragaria x ananassa HOM05D006506 ORTHO05D007809 3.2e-128 462.2 320 71.9
Nitab4.5_0005461g0020 Nicotiana tabacum HOM05D006506 ORTHO05D007809 5.4e-128 461.5 328 70.4
Duzib235G0689 Durio zibethinus HOM05D006506 ORTHO05D007809 1.2e-127 460.3 322 71.4
Nitab4.5_0010868g0010 Nicotiana tabacum HOM05D006506 ORTHO05D007809 2.1e-127 459.5 328 70.1
PGSC0003DMG400014148 Solanum tuberosum HOM05D006506 ORTHO05D007809 2.1e-127 459.5 328 69.2
CAN.G407.9 Capsicum annuum HOM05D006506 ORTHO05D007809 3.5e-127 458.8 328 70.7
PGR031G2298 Punica granatum HOM05D006506 ORTHO05D007809 3.9e-126 455.3 323 71.5
Cc04_g04540 Coffea canephora HOM05D006506 ORTHO05D007809 5.1e-126 454.9 324 70.4
Sopen03g036430 Solanum pennellii HOM05D006506 ORTHO05D007809 6.6e-126 454.5 328 68.3
Ciclev10027407m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.9e-125 453.0 317 72.6
MBI06_g17213_MAGBIO Magnolia biondii HOM05D006506 ORTHO05D007809 2.5e-125 452.6 316 71.2
PSO210G7208 Papaver somniferum HOM05D006506 ORTHO05D007809 1.1e-123 447.2 320 69.7
Oeu027841.1 Olea europaea HOM05D006506 ORTHO05D007809 4.0e-123 445.3 325 69.8
MSTRG.11150 Avicennia marina HOM05D006506 ORTHO05D007809 2.0e-122 443.0 319 69.3
SGA_v2.0_scaffold37G14756 Striga asiatica HOM05D006506 ORTHO05D007809 2.9e-121 439.1 319 68.0
Ciclev10026188m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.9e-120 436.4 317 70.3
SalBow2G1795 Salvia bowleyana HOM05D006506 ORTHO05D007809 1.7e-118 429.9 317 67.5
Ciclev10027064m.g Citrus clementina HOM05D006506 ORTHO05D007809 7.3e-117 424.5 300 72.7
Ciclev10027493m.g Citrus clementina HOM05D006506 ORTHO05D007809 2.8e-116 422.5 300 72.7
HPP92_007331 Vanilla planifolia HOM05D006506 ORTHO05D007809 6.2e-116 421.4 316 66.8
unitig_62.g23595 Utricularia gibba HOM05D006506 ORTHO05D007809 8.1e-116 421.0 320 66.2
Ciclev10027055m.g Citrus clementina HOM05D006506 ORTHO05D007809 2.0e-114 416.4 304 71.4
SEGI_33428 Sequoiadendron giganteum HOM05D006506 ORTHO05D007809 1.3e-113 413.7 318 64.2
Solyc03g117530.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 4.2e-112 408.7 302 66.6
Migut.I00752 Erythranthe guttata HOM05D006506 ORTHO05D007809 7.1e-112 407.9 319 65.5
ATR0605G102 Amborella trichopoda HOM05D006506 ORTHO05D007809 2.1e-111 406.4 319 63.3
Aqoxy7G02198 Aquilegia oxysepala HOM05D006506 ORTHO05D007809 1.9e-109 399.8 293 67.2
Ah.08g214330 Amaranthus hybridus HOM05D006506 ORTHO05D007809 8.1e-108 394.4 319 63.0
AUR62030047 Chenopodium quinoa HOM05D006506 ORTHO05D007809 8.1e-108 394.4 317 63.4
Os04g0528400 Oryza sativa ssp. japonica HOM05D006506 ORTHO05D007809 6.4e-105 384.8 326 58.6
EL10Ac7g17638 Beta vulgaris HOM05D006506 ORTHO05D007809 1.4e-104 383.6 310 62.6
HPP92_007333 Vanilla planifolia HOM05D006506 ORTHO05D007809 3.0e-102 375.9 322 62.4
Manes.11G058300 Manihot esculenta HOM05D006506 ORTHO05D007809 3.7e-100 369.0 258 73.3
THA.LOC104818016 Tarenaya hassleriana HOM05D006506 ORTHO05D007809 9.0e-99 364.4 268 70.1
AagrBONN_evm.TU.Sc2ySwM_117.4079 Anthoceros agrestis HOM05D006506 ORTHO05D007809 2.5e-96 356.3 314 55.4
AUR62002633 Chenopodium quinoa HOM05D006506 ORTHO05D007809 3.5e-95 352.4 291 61.9
Pp3c1_24880 Physcomitrium patens HOM05D006506 ORTHO05D007809 7.9e-95 351.3 316 55.4
Ciclev10027054m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.2e-90 337.4 257 70.4
Mapoly0090s0026 Marchantia polymorpha HOM05D006506 ORTHO05D007809 2.6e-90 336.3 319 53.3
SMO115G0207 Selaginella moellendorffii HOM05D006506 ORTHO05D007809 3.4e-90 335.9 315 53.3
Zm00001eb427100 Zea mays HOM05D006506 ORTHO05D007809 1.7e-89 333.6 326 51.5
Atru.chr1.2888 Acer truncatum HOM05D006506 ORTHO05D007809 9.3e-88 327.8 229 72.5
CBR_g8656 Chara braunii HOM05D006506 ORTHO05D007809 8.7e-86 321.2 320 51.2
Ciclev10027056m.g Citrus clementina HOM05D006506 ORTHO05D007809 5.7e-85 318.5 306 59.2
Sc05g0005410 Simmondsia chinensis HOM05D006506 ORTHO05D007809 3.7e-84 315.8 284 59.2
Lj9E498T1 Lonicera japonica HOM05D006506 ORTHO05D007809 1.9e-80 303.5 214 72.0
CDE11G1201 Ceratophyllum demersum HOM05D006506 ORTHO05D007809 1.4e-75 287.3 284 53.2
CDE08G0717 Ceratophyllum demersum HOM05D006506 ORTHO05D007809 4.5e-66 255.8 212 59.4
Prupe.2G072500 Prunus persica HOM05D006506 ORTHO05D007809 9.1e-59 231.5 295 46.1
TPR.G26194 Trifolium pratense HOM05D002479 ORTHO05D007809 2.2e-44 183.7 129 70.5
Solyc04g026070.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 8.3e-36 155.2 121 61.2
Cre12.g524350 Chlamydomonas reinhardtii HOM05D006506 ORTHO05D007809 7.3e-32 142.1 268 36.9
Ciclev10027644m.g Citrus clementina HOM05D006506 ORTHO05D007809 8.9e-30 135.2 104 64.4
SMO018G0003 Selaginella moellendorffii HOM05D006506 ORTHO05D007809 7.5e-29 132.1 116 56.0
ATR0068G037 Amborella trichopoda HOM05D006506 ORTHO05D007809 1.0e-25 121.7 115 54.8
Solyc08g044480.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 5.0e-25 119.4 115 52.2
Nn4g24996 Nelumbo nucifera HOM05D006506 ORTHO05D007809 4.3e-24 116.3 62 83.9
Ciclev10026990m.g Citrus clementina HOM05D006506 ORTHO05D007809 5.6e-24 115.9 104 59.6
PRCOL_00003381 Prasinoderma coloniale HOM05D006506 ORTHO05D007809 3.6e-23 113.2 352 28.7
MCO05G139 Micromonas commoda HOM05D006506 ORTHO05D007809 1.2e-18 98.2 312 27.9
MBI08_g32097_MAGBIO Magnolia biondii HOM05D006506 ORTHO05D007809 1.3e-17 94.7 71 67.6
Mapoly1721s0002 Marchantia polymorpha HOM05D006506 ORTHO05D007809 1.1e-14 85.1 62 61.3


User provided reference genes

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