Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G029250 Phaseolus vulgaris HOM05D022012 ORTHO05D003856 6.6e-78 293.9 140 100.0
Phvul.004G169400 Phaseolus vulgaris HOM05D022012 ORTHO05D003856 4.1e-64 248.1 137 84.7
VMungo0464G0927 Vigna mungo HOM05D022012 ORTHO05D003856 5.8e-58 227.6 164 68.9
VMungo0464G0934 Vigna mungo HOM05D022012 ORTHO05D003856 1.1e-43 180.3 137 62.8
Phvul.004G169500 Phaseolus vulgaris HOM05D022012 ORTHO05D003856 1.7e-41 172.9 139 60.4
Gohir.D06G064250 Gossypium hirsutum HOM05D002733 ORTHO05D003856 7.4e-13 77.8 125 37.6
Gorai.010G075000 Gossypium raimondii HOM05D002733 ORTHO05D003856 7.4e-13 77.8 125 37.6
Duzib168G2229 Durio zibethinus HOM05D002733 ORTHO05D003856 9.6e-13 77.4 124 38.7
Cfa016244 Carpinus fangiana HOM05D002733 ORTHO05D003856 3.7e-12 75.5 82 42.7
TPR.G18869 Trifolium pratense HOM05D004715 ORTHO05D005644 3.7e-12 75.5 98 44.9
COL.COLO4_34789 Corchorus olitorius HOM05D002733 ORTHO05D003856 1.8e-11 73.2 125 35.2
Gohir.A06G065650 Gossypium hirsutum HOM05D002733 ORTHO05D003856 1.8e-11 73.2 125 36.0
Haze_00197 Corylus avellana HOM05D002733 ORTHO05D003856 2.4e-11 72.8 98 36.7
VMungo1080G0152 Vigna mungo HOM05D002733 ORTHO05D003856 2.4e-11 72.8 88 39.8
Lj1g0000886 Lotus japonicus HOM05D002733 ORTHO05D003856 4.1e-11 72.0 103 36.9
Duzib213G0038 Durio zibethinus HOM05D002733 ORTHO05D003856 5.3e-11 71.6 116 39.7
Thecc.09G104200 Theobroma cacao HOM05D002733 ORTHO05D003856 5.3e-11 71.6 124 35.5
TPR.G1412 Trifolium pratense HOM05D002733 ORTHO05D003856 9.0e-11 70.9 97 44.3
Potri.001G397100 Populus trichocarpa HOM05D002733 ORTHO05D003856 1.2e-10 70.5 124 35.5
Phvul.005G031300 Phaseolus vulgaris HOM05D002733 ORTHO05D003856 1.5e-10 70.1 88 36.4
CiPaw.03G014700 Carya illinoinensis HOM05D002733 ORTHO05D003856 2.6e-10 69.3 124 33.9
VMungo1080G0686 Vigna mungo HOM05D002733 ORTHO05D003856 3.4e-10 68.9 87 36.8
Duzib213G1035 Durio zibethinus HOM05D002733 ORTHO05D003856 4.5e-10 68.6 89 43.8
QL02p042807 Quercus lobata HOM05D002733 ORTHO05D003856 4.5e-10 68.6 122 36.9
Thecc.07G171000 Theobroma cacao HOM05D002733 ORTHO05D003856 4.5e-10 68.6 116 34.5
QL02p042555 Quercus lobata HOM05D002733 ORTHO05D003856 7.6e-10 67.8 122 36.9
Prupe.7G223800 Prunus persica HOM05D002733 ORTHO05D003856 1.0e-09 67.4 123 32.5
Prupe.7G223900 Prunus persica HOM05D002733 ORTHO05D003856 1.3e-09 67.0 123 31.7
QL01p018935 Quercus lobata HOM05D002733 ORTHO05D003856 3.8e-09 65.5 123 34.1
Glyma.04G133200 Glycine max HOM05D002733 ORTHO05D003856 5.0e-09 65.1 96 31.2
MD02G1059300 Malus domestica HOM05D002733 ORTHO05D003856 6.5e-09 64.7 89 38.2
TPR.G1447 Trifolium pratense HOM05D002733 ORTHO05D003856 6.5e-09 64.7 97 41.2
QL01p018928 Quercus lobata HOM05D002733 ORTHO05D003856 1.1e-08 63.9 123 34.1
Hma1.2p1_1080F.1_g255020 Hydrangea macrophylla HOM05D002733 ORTHO05D003856 2.5e-08 62.8 83 39.8
Prupe.7G224000 Prunus persica HOM05D002733 ORTHO05D003856 3.2e-08 62.4 82 40.2
Manes.03G176000 Manihot esculenta HOM05D002733 ORTHO05D003856 5.5e-08 61.6 81 38.3
Ciclev10010395m.g Citrus clementina HOM05D002733 ORTHO05D003856 7.2e-08 61.2 116 34.5
Sed0017653 Sechium edule HOM05D002733 ORTHO05D003856 7.2e-08 61.2 84 35.7
MD15G1316300 Malus domestica HOM05D002733 ORTHO05D003856 9.3e-08 60.8 115 32.2
Medtr3g013810 Medicago truncatula HOM05D002733 ORTHO05D003856 9.3e-08 60.8 111 36.0
Medtr3g013820 Medicago truncatula HOM05D002733 ORTHO05D003856 1.2e-07 60.5 111 36.0
Manes.03G176200 Manihot esculenta HOM05D002733 ORTHO05D003856 2.1e-07 59.7 81 37.0
CSS0001293 Camellia sinensis var. sinensis HOM05D002733 ORTHO05D003856 4.6e-07 58.5 88 36.4
Medtr0267s0030 Medicago truncatula HOM05D002733 ORTHO05D003856 4.6e-07 58.5 85 41.2
Medtr3g013900 Medicago truncatula HOM05D002733 ORTHO05D003856 4.6e-07 58.5 85 41.2
Medtr3g013920 Medicago truncatula HOM05D002733 ORTHO05D003856 7.9e-07 57.8 85 41.2
PSO566G0305 Papaver somniferum HOM05D002733 ORTHO05D003856 7.9e-07 57.8 91 31.9
Ciclev10007038m.g Citrus clementina HOM05D002733 ORTHO05D003856 1.0e-06 57.4 89 36.0
Aqoxy1G01499 Aquilegia oxysepala HOM05D002733 ORTHO05D003856 2.3e-06 56.2 78 41.0
CAN.G1774.3 Capsicum annuum HOM05D002733 ORTHO05D003856 3.0e-06 55.8 79 34.2
Aqoxy1G01498 Aquilegia oxysepala HOM05D002733 ORTHO05D003856 5.1e-06 55.1 76 35.5


User provided reference genes

Program Settings