Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G028700 Phaseolus vulgaris HOM05D004248 ORTHO05D004978 3.3e-56 221.5 112 100.0
Phvul.008G104000 Phaseolus vulgaris HOM05D004248 ORTHO05D004978 8.0e-26 120.6 170 48.2
Glyma.07G150100 Glycine max HOM05D004248 ORTHO05D004978 6.7e-25 117.5 171 46.2
Glyma.16G099100 Glycine max HOM05D004248 ORTHO05D004978 8.8e-25 117.1 171 45.6
Ca_26380_v3 Cicer arietinum L. HOM05D004248 ORTHO05D004978 7.4e-24 114.0 129 57.4
Ca_09055_v3 Cicer arietinum L. HOM05D004248 ORTHO05D004978 1.7e-23 112.8 129 56.6
Ca_30860_v3 Cicer arietinum L. HOM05D004248 ORTHO05D004978 8.2e-23 110.5 127 57.5
Lj1g0019866 Lotus japonicus HOM05D004248 ORTHO05D004978 1.3e-20 103.2 170 44.1
VMungo0647G1936 Vigna mungo HOM05D004248 ORTHO05D004978 6.5e-20 100.9 170 39.4
Lalb_Chr20g0111391 Lupinus albus HOM05D004248 ORTHO05D004978 8.5e-20 100.5 171 42.7
Psat3g029120 Pisum sativum HOM05D004248 ORTHO05D004978 1.5e-19 99.8 170 43.5
TPR.G35565 Trifolium pratense HOM05D004248 ORTHO05D004978 2.5e-19 99.0 170 42.4
Medtr7g106190 Medicago truncatula HOM05D004248 ORTHO05D004978 8.0e-18 94.0 170 42.9
arahy.Tifrunner.gnm1.ann1.ZDQ0NF Arachis hypogaea HOM05D004248 ORTHO05D004978 1.5e-16 89.7 171 39.2
arahy.Tifrunner.gnm1.ann1.2W33L2 Arachis hypogaea HOM05D004248 ORTHO05D004978 3.7e-15 85.1 186 36.6
Lj1A1051T46 Lonicera japonica HOM05D004248 ORTHO05D004978 2.5e-11 72.4 167 34.1
Prupe.7G095000 Prunus persica HOM05D004248 ORTHO05D004978 4.2e-11 71.6 170 32.9
Atru.chr9.697 Acer truncatum HOM05D004248 ORTHO05D004978 2.7e-10 68.9 160 34.4
Atru.chr8.1370 Acer truncatum HOM05D004248 ORTHO05D004978 6.1e-10 67.8 68 57.4
Haze_20188 Corylus avellana HOM05D004248 ORTHO05D004978 8.0e-10 67.4 165 32.1
Dinv31757 Davidia involucrata HOM05D004248 ORTHO05D004978 8.0e-10 67.4 170 29.4
Cfa016679 Carpinus fangiana HOM05D004248 ORTHO05D004978 1.4e-09 66.6 165 32.1
Potri.011G095700 Populus trichocarpa HOM05D004248 ORTHO05D004978 1.4e-09 66.6 63 58.7
MD10G1053900 Malus domestica HOM05D004248 ORTHO05D004978 1.8e-09 66.2 68 50.0
Potri.001G208900 Populus trichocarpa HOM05D004248 ORTHO05D004978 1.8e-09 66.2 63 60.3
CiPaw.10G017100 Carya illinoinensis HOM05D004248 ORTHO05D004978 2.3e-09 65.9 68 57.4
CSS0019025 Camellia sinensis var. sinensis HOM05D004248 ORTHO05D004978 5.2e-09 64.7 153 31.4
Oeu036625.1 Olea europaea HOM05D004248 ORTHO05D004978 5.2e-09 64.7 114 38.6
Sabra01G0161200 Salix brachista HOM05D004248 ORTHO05D004978 5.2e-09 64.7 63 57.1
MD12G1040000 Malus domestica HOM05D004248 ORTHO05D004978 6.8e-09 64.3 68 48.5
Dinv05301 Davidia involucrata HOM05D004248 ORTHO05D004978 1.2e-08 63.5 63 55.6
Eucgr.E01507 Eucalyptus grandis HOM05D004248 ORTHO05D004978 1.2e-08 63.5 100 44.0
A10p30020 Brassica napus HOM05D004248 ORTHO05D004978 1.5e-08 63.2 68 50.0
Cfa020026 Carpinus fangiana HOM05D004248 ORTHO05D004978 1.5e-08 63.2 68 52.9
Haze_19699 Corylus avellana HOM05D004248 ORTHO05D004978 1.5e-08 63.2 68 52.9
Actinidia06045 Actinidia chinensis HOM05D004248 ORTHO05D004978 2.0e-08 62.8 165 30.3
QL07p036804 Quercus lobata HOM05D004248 ORTHO05D004978 2.0e-08 62.8 68 52.9
Sabra06G0156800 Salix brachista HOM05D004248 ORTHO05D004978 2.0e-08 62.8 63 55.6
GSVIVG01033953001 Vitis vinifera HOM05D004248 ORTHO05D004978 2.0e-08 62.8 170 27.6
Actinidia37744 Actinidia chinensis HOM05D004248 ORTHO05D004978 2.6e-08 62.4 165 30.3
AL4G19610 Arabidopsis lyrata HOM05D004248 ORTHO05D004978 2.6e-08 62.4 173 27.7
Oeu052620.1 Olea europaea HOM05D004248 ORTHO05D004978 2.6e-08 62.4 63 52.4
TWI74G1036 Tripterygium wilfordii HOM05D004248 ORTHO05D004978 3.4e-08 62.0 63 54.0
BcaNung06319 Brassica carinata HOM05D004248 ORTHO05D004978 4.4e-08 61.6 68 50.0
Ciclev10011038m.g Citrus clementina HOM05D004248 ORTHO05D004978 5.7e-08 61.2 167 31.1
Thecc.05G104000 Theobroma cacao HOM05D004248 ORTHO05D004978 5.7e-08 61.2 68 50.0
BcaC06g32369 Brassica carinata HOM05D004248 ORTHO05D004978 7.5e-08 60.8 68 48.5
C09p70430 Brassica napus HOM05D004248 ORTHO05D004978 7.5e-08 60.8 68 48.5
BolC9t59789H Brassica oleracea HOM05D004248 ORTHO05D004978 7.5e-08 60.8 68 48.5
MSTRG.5896 Avicennia marina HOM05D004248 ORTHO05D004978 9.8e-08 60.5 63 52.4
BraA10t45042Z Brassica rapa HOM05D004248 ORTHO05D004978 9.8e-08 60.5 68 47.1
AL6G38940 Arabidopsis lyrata HOM05D004248 ORTHO05D004978 1.3e-07 60.1 63 55.6
Duzib093G0037 Durio zibethinus HOM05D004248 ORTHO05D004978 1.3e-07 60.1 63 54.0
Gohir.A09G134400 Gossypium hirsutum HOM05D004248 ORTHO05D004978 1.3e-07 60.1 162 29.6
Nn4g22932 Nelumbo nucifera HOM05D004248 ORTHO05D004978 1.3e-07 60.1 63 47.6
Peaxi162Scf00586g00027 Petunia axillaris HOM05D004248 ORTHO05D004978 1.7e-07 59.7 120 36.7
DCAR_020706 Daucus carota HOM05D004248 ORTHO05D004978 2.2e-07 59.3 68 50.0
AT5G27010 Arabidopsis thaliana HOM05D004248 ORTHO05D004978 2.8e-07 58.9 77 44.2
CARHR207090 Cardamine hirsuta HOM05D004248 ORTHO05D004978 2.8e-07 58.9 68 48.5
Thhalv10012647m.g Eutrema salsugineum HOM05D004248 ORTHO05D004978 3.7e-07 58.5 68 48.5
HanXRQChr06g0164371 Helianthus annuus HOM05D004248 ORTHO05D004978 3.7e-07 58.5 68 45.6
Aa31sc52G180 Aethionema arabicum HOM05D004248 ORTHO05D004978 4.8e-07 58.2 68 48.5
AL6G16430 Arabidopsis lyrata HOM05D004248 ORTHO05D004978 4.8e-07 58.2 68 45.6
Migut.J00705 Erythranthe guttata HOM05D004248 ORTHO05D004978 4.8e-07 58.2 63 52.4
RcHm_v2.0_Chr1g0331071 Rosa chinensis HOM05D004248 ORTHO05D004978 4.8e-07 58.2 169 29.0
Sp6g36500 Schrenkiella parvula HOM05D004248 ORTHO05D004978 4.8e-07 58.2 68 47.1
ECA247G2914 Erigeron canadensis HOM05D004248 ORTHO05D004978 6.3e-07 57.8 63 54.0
FvH4_6g20280 Fragaria vesca HOM05D004248 ORTHO05D004978 6.3e-07 57.8 68 45.6
RcHm_v2.0_Chr3g0475871 Rosa chinensis HOM05D004248 ORTHO05D004978 6.3e-07 57.8 169 29.0
AUR62030747 Chenopodium quinoa HOM05D004248 ORTHO05D004978 8.3e-07 57.4 63 47.6
FAN14G1070 Fragaria x ananassa HOM05D004248 ORTHO05D004978 8.3e-07 57.4 63 47.6
Gohir.D09G130900 Gossypium hirsutum HOM05D004248 ORTHO05D004978 8.3e-07 57.4 162 29.0
Gorai.006G149600 Gossypium raimondii HOM05D004248 ORTHO05D004978 8.3e-07 57.4 162 29.0
HanXRQChr06g0164411 Helianthus annuus HOM05D004248 ORTHO05D004978 8.3e-07 57.4 68 45.6
Sopen01g003120 Solanum pennellii HOM05D004248 ORTHO05D004978 8.3e-07 57.4 63 47.6
AT5G06350 Arabidopsis thaliana HOM05D004248 ORTHO05D004978 1.1e-06 57.0 68 44.1
AUR62036385 Chenopodium quinoa HOM05D004248 ORTHO05D004978 1.1e-06 57.0 63 47.6
Manes.09G045100 Manihot esculenta HOM05D004248 ORTHO05D004978 1.1e-06 57.0 68 48.5
Sc22g0002860 Simmondsia chinensis HOM05D004248 ORTHO05D004978 1.1e-06 57.0 63 50.8
Solyc01g007140.3 Solanum lycopersicum HOM05D004248 ORTHO05D004978 1.1e-06 57.0 117 33.3
Carub.0006s0524 Capsella rubella HOM05D004248 ORTHO05D004978 1.4e-06 56.6 68 47.1
COL.COLO4_29580 Corchorus olitorius HOM05D004248 ORTHO05D004978 1.4e-06 56.6 167 26.9
PSO017G5751 Papaver somniferum HOM05D004248 ORTHO05D004978 1.4e-06 56.6 63 42.9
vmacro07476 Vaccinium macrocarpon HOM05D004248 ORTHO05D004978 1.4e-06 56.6 63 50.8
Cpa.g.sc104.35 Carica papaya HOM05D004248 ORTHO05D004978 1.8e-06 56.2 63 52.4
Rhsim03G0064800 Rhododendron simsii HOM05D004248 ORTHO05D004978 1.8e-06 56.2 65 49.2
Nitab4.5_0000020g0040 Nicotiana tabacum HOM05D004248 ORTHO05D004978 2.4e-06 55.8 63 47.6
Nitab4.5_0002858g0090 Nicotiana tabacum HOM05D004248 ORTHO05D004978 2.4e-06 55.8 63 47.6
PSO478G2311 Papaver somniferum HOM05D004248 ORTHO05D004978 2.4e-06 55.8 63 42.9
PSO478G2592 Papaver somniferum HOM05D004248 ORTHO05D004978 2.4e-06 55.8 63 42.9
MBI13_g30330_MAGBIO Magnolia biondii HOM05D004248 ORTHO05D003073 3.1e-06 55.5 62 46.8
THA.LOC104809952 Tarenaya hassleriana HOM05D004248 ORTHO05D004978 3.1e-06 55.5 62 45.2
Aqoxy3G00875 Aquilegia oxysepala HOM05D004248 ORTHO05D004978 4.1e-06 55.1 64 40.6
FAN05G1094 Fragaria x ananassa HOM05D004248 ORTHO05D004978 4.1e-06 55.1 68 44.1
FAN05G4951 Fragaria x ananassa HOM05D004248 ORTHO05D004978 4.1e-06 55.1 68 44.1
RcHm_v2.0_Chr1g0331061 Rosa chinensis HOM05D004248 ORTHO05D004978 4.1e-06 55.1 169 27.2
FAN02G0498 Fragaria x ananassa HOM05D004248 ORTHO05D004978 5.4e-06 54.7 68 44.1
Manes.09G044700 Manihot esculenta HOM05D004248 ORTHO05D004978 5.4e-06 54.7 68 47.1
FAN09G3200 Fragaria x ananassa HOM05D004248 ORTHO05D004978 9.1e-06 53.9 68 44.1


User provided reference genes

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