Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G026700 Phaseolus vulgaris HOM05D007272 ORTHO05D009305 1.3e-290 1002.3 495 100.0
Glyma.13G064500 Glycine max HOM05D007272 ORTHO05D009305 1.6e-224 782.7 499 78.0
Ca_04270_v3 Cicer arietinum L. HOM05D007272 ORTHO05D009305 2.7e-187 659.1 487 69.2
VMungo0464G0783 Vigna mungo HOM05D007272 ORTHO05D009305 3.1e-183 645.6 404 82.4
Lj2g0023599 Lotus japonicus HOM05D007272 ORTHO05D009305 3.8e-181 638.6 495 67.9
TPR.G4317 Trifolium pratense HOM05D007272 ORTHO05D009305 5.5e-180 634.8 485 66.8
Sabra17G0070200 Salix brachista HOM05D007272 ORTHO05D009305 1.4e-178 630.2 479 65.8
Potri.017G079100 Populus trichocarpa HOM05D007272 ORTHO05D009305 1.8e-178 629.8 494 64.8
Manes.17G022200 Manihot esculenta HOM05D007272 ORTHO05D009305 8.3e-176 620.9 489 63.2
TWI34G0655 Tripterygium wilfordii HOM05D007272 ORTHO05D009305 1.4e-175 620.2 486 65.6
GSVIVG01011351001 Vitis vinifera HOM05D007272 ORTHO05D009305 1.1e-172 610.5 479 64.5
Lalb_Chr21g0318941 Lupinus albus HOM05D007272 ORTHO05D009305 9.5e-172 607.4 485 63.9
QL02p080768 Quercus lobata HOM05D007272 ORTHO05D009305 2.3e-170 602.8 482 64.1
Lj2g0009951 Lotus japonicus HOM05D007272 ORTHO05D009305 8.9e-170 600.9 482 64.1
arahy.Tifrunner.gnm1.ann1.UFNR33 Arachis hypogaea HOM05D007272 ORTHO05D009305 1.5e-169 600.1 499 62.7
Haze_14576 Corylus avellana HOM05D007272 ORTHO05D009305 4.4e-169 598.6 485 63.3
Psat1g075440 Pisum sativum HOM05D007272 ORTHO05D009305 1.1e-167 594.0 485 64.1
Actinidia23567 Actinidia chinensis HOM05D007272 ORTHO05D009305 3.2e-167 592.4 487 62.0
Cfa007518 Carpinus fangiana HOM05D007272 ORTHO05D009305 3.2e-167 592.4 496 61.7
Glyma.19G020400 Glycine max HOM05D007272 ORTHO05D009305 8.6e-165 584.3 340 83.5
Ciclev10011541m.g Citrus clementina HOM05D007272 ORTHO05D009305 1.5e-164 583.6 493 61.5
TAR629G0691 Trochodendron aralioides HOM05D007272 ORTHO05D009305 5.6e-164 581.6 488 60.5
Duzib187G0958 Durio zibethinus HOM05D007272 ORTHO05D009305 2.8e-163 579.3 504 60.3
Thecc.04G075900 Theobroma cacao HOM05D007272 ORTHO05D009305 3.1e-162 575.9 497 60.4
Gorai.006G025400 Gossypium raimondii HOM05D007272 ORTHO05D009305 4.0e-162 575.5 507 60.0
vmacro05725 Vaccinium macrocarpon HOM05D007272 ORTHO05D009305 1.3e-160 570.5 487 60.0
Hma1.2p1_0449F.1_g155160 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 1.6e-158 563.5 497 59.2
Prupe.3G271100 Prunus persica HOM05D007272 ORTHO05D009305 2.0e-158 563.1 490 60.0
Gohir.A09G022200 Gossypium hirsutum HOM05D007272 ORTHO05D009305 3.5e-158 562.4 507 59.2
arahy.Tifrunner.gnm1.ann1.091QIK Arachis hypogaea HOM05D007272 ORTHO05D009305 3.0e-157 559.3 584 53.6
Cpa.g.sc14.36 Carica papaya HOM05D007272 ORTHO05D009305 2.5e-156 556.2 444 63.3
CiPaw.04G019400 Carya illinoinensis HOM05D007272 ORTHO05D009305 5.6e-156 555.1 496 58.5
PGR142G3376 Punica granatum HOM05D007272 ORTHO05D009305 1.1e-154 550.8 478 58.6
Nn3g17142 Nelumbo nucifera HOM05D007272 ORTHO05D009305 4.4e-153 545.4 476 56.1
QL02p080779 Quercus lobata HOM05D007272 ORTHO05D009305 1.9e-151 540.0 527 56.2
Lj7C400T1 Lonicera japonica HOM05D007272 ORTHO05D009305 3.2e-151 539.3 488 58.0
Lsat_1_v5_gn_2_88701 Lactuca sativa HOM05D007272 ORTHO05D009305 3.5e-150 535.8 481 57.0
Sc10g0003770 Simmondsia chinensis HOM05D007272 ORTHO05D009305 4.6e-150 535.4 499 55.1
HanXRQChr14g0449311 Helianthus annuus HOM05D007272 ORTHO05D009305 3.9e-149 532.3 474 57.2
Gohir.D09G021400 Gossypium hirsutum HOM05D007272 ORTHO05D009305 1.5e-148 530.4 462 59.7
Ah.10g031300 Amaranthus hybridus HOM05D007272 ORTHO05D009305 2.5e-148 529.6 486 56.0
AUR62031636 Chenopodium quinoa HOM05D007272 ORTHO05D009305 3.3e-148 529.3 493 53.8
MD17G1048000 Malus domestica HOM05D007272 ORTHO05D009305 3.6e-147 525.8 504 56.3
RhsimUnG0199700 Rhododendron simsii HOM05D007272 ORTHO05D009305 1.4e-146 523.9 564 51.6
DCAR_021668 Daucus carota HOM05D007272 ORTHO05D009305 1.2e-145 520.8 476 53.8
RcHm_v2.0_Chr2g0169041 Rosa chinensis HOM05D007272 ORTHO05D009305 1.2e-145 520.8 518 55.2
Migut.H00895 Erythranthe guttata HOM05D007272 ORTHO05D009305 1.1e-143 514.2 502 54.2
FAN05G2713 Fragaria x ananassa HOM05D007272 ORTHO05D009305 1.1e-143 514.2 495 56.0
FvH4_6g49170 Fragaria vesca HOM05D007272 ORTHO05D009305 9.2e-143 511.1 495 55.6
FAN14G5197 Fragaria x ananassa HOM05D007272 ORTHO05D009305 6.0e-142 508.4 495 55.4
Hund13235 Selenicereus undatus HOM05D007272 ORTHO05D009305 6.0e-142 508.4 474 55.1
FAN02G2692 Fragaria x ananassa HOM05D001960 ORTHO05D004348 7.8e-142 508.1 495 55.4
ECA238G2465 Erigeron canadensis HOM05D007272 ORTHO05D009305 5.6e-140 501.9 478 54.8
RhsimUnG0056400 Rhododendron simsii HOM05D007272 ORTHO05D009305 9.6e-140 501.1 591 49.1
MSTRG.3220 Avicennia marina HOM05D007272 ORTHO05D009305 8.1e-139 498.0 492 54.1
ClCG10G014870 Citrullus lanatus HOM05D007272 ORTHO05D009305 1.4e-138 497.3 487 53.8
THA.LOC104822369 Tarenaya hassleriana HOM05D007272 ORTHO05D009305 3.1e-138 496.1 492 53.3
Cc07_g03090 Coffea canephora HOM05D007272 ORTHO05D009305 3.4e-137 492.7 489 52.4
SalBow1G7111 Salvia bowleyana HOM05D007272 ORTHO05D009305 5.8e-137 491.9 499 55.1
Nitab4.5_0009739g0030 Nicotiana tabacum HOM05D007272 ORTHO05D009305 1.2e-134 484.2 505 52.7
CANSAT64G0717 Cannabis sativa HOM05D007272 ORTHO05D009305 2.5e-132 476.5 472 51.3
PSO591G0492 Papaver somniferum HOM05D007272 ORTHO05D009305 9.9e-129 464.5 479 51.1
FAN09G2990 Fragaria x ananassa HOM05D007272 ORTHO05D009305 6.4e-128 461.8 406 59.1
EL10Ac2g02942 Beta vulgaris HOM05D007272 ORTHO05D009305 8.4e-128 461.5 486 50.8
SGA_v2.0_scaffold135G34775 Striga asiatica HOM05D007118 ORTHO05D008957 5.4e-127 458.8 501 51.3
COL.COLO4_25162 Corchorus olitorius HOM05D007118 ORTHO05D008957 7.1e-127 458.4 493 51.9
Oeu037173.1 Olea europaea HOM05D007272 ORTHO05D009305 7.9e-126 454.9 492 50.4
Atru.chr8.1898 Acer truncatum HOM05D007272 ORTHO05D009305 8.7e-125 451.4 373 63.0
Dinv33728 Davidia involucrata HOM05D007272 ORTHO05D009305 3.3e-124 449.5 368 62.2
Sopen02g032460 Solanum pennellii HOM05D007272 ORTHO05D009305 5.6e-124 448.7 500 49.8
Solyc02g087730.3 Solanum lycopersicum HOM05D007272 ORTHO05D009305 7.4e-124 448.4 500 49.6
HPP92_000629 Vanilla planifolia HOM05D007272 ORTHO05D009305 3.7e-123 446.0 486 48.6
Peaxi162Scf00129g00431 Petunia axillaris HOM05D007272 ORTHO05D009305 5.3e-122 442.2 512 49.0
Gohir.D04G050866 Gossypium hirsutum HOM05D007272 ORTHO05D009305 2.7e-118 429.9 461 50.8
Gorai.012G056400 Gossypium raimondii HOM05D007272 ORTHO05D009305 2.7e-118 429.9 461 50.8
Medtr6g011500 Medicago truncatula HOM05D007272 ORTHO05D009305 9.6e-116 421.4 379 61.2
ATR0706G038 Amborella trichopoda HOM05D007272 ORTHO05D009305 2.1e-115 420.2 486 46.9
PSO832G2300 Papaver somniferum HOM05D007272 ORTHO05D009305 2.8e-115 419.9 430 52.1
Gohir.A05G363800 Gossypium hirsutum HOM05D007272 ORTHO05D009305 4.9e-112 409.1 443 50.6
Aqoxy3G03290 Aquilegia oxysepala HOM05D007272 ORTHO05D009305 9.7e-108 394.8 407 51.1
Zm00001eb121640 Zea mays HOM05D007272 ORTHO05D009305 2.0e-105 387.1 498 44.6
Os01g0185400 Oryza sativa ssp. japonica HOM05D007272 ORTHO05D009305 1.4e-103 380.9 498 44.2
MD09G1047900 Malus domestica HOM05D007272 ORTHO05D009305 8.5e-96 355.1 532 42.5
Nitab4.5_0000564g0300 Nicotiana tabacum HOM05D007272 ORTHO05D009305 3.6e-94 349.7 570 41.4
Pp3c15_23310 Physcomitrium patens HOM05D007272 ORTHO05D009305 6.7e-93 345.5 498 40.8
MD17G1048100 Malus domestica HOM05D007272 ORTHO05D009305 1.1e-92 344.7 325 56.0
Mapoly0135s0023 Marchantia polymorpha HOM05D007272 ORTHO05D009305 2.0e-81 307.4 491 40.3
PGSC0003DMG400001312 Solanum tuberosum HOM05D007272 ORTHO05D009305 2.1e-78 297.4 287 55.4
SMO356G0594 Selaginella moellendorffii HOM05D007272 ORTHO05D009305 2.3e-69 267.3 479 36.1
CSS0013465 Camellia sinensis var. sinensis HOM05D007272 ORTHO05D009305 2.5e-63 247.3 217 59.4
VMungo0464G0246 Vigna mungo HOM05D007272 ORTHO05D009305 2.9e-51 207.2 123 82.9
CSS0034889 Camellia sinensis var. sinensis HOM05D007272 ORTHO05D009305 5.4e-50 203.0 225 52.4
CDE04G0606 Ceratophyllum demersum HOM05D007272 ORTHO05D009305 3.9e-48 196.8 190 52.6
Duzib147G0842 Durio zibethinus HOM05D007272 ORTHO05D009305 4.4e-36 156.8 185 48.6
AagrBONN_evm.TU.Sc2ySwM_344.2727 Anthoceros agrestis HOM05D007272 ORTHO05D009305 2.9e-27 127.5 180 36.7
Zm00001eb204740 Zea mays HOM05D007272 ORTHO05D009305 2.1e-25 121.3 219 37.0
Medtr8g044020 Medicago truncatula HOM05D007272 ORTHO05D009305 2.3e-24 117.9 180 43.9
Medtr6g011510 Medicago truncatula HOM05D007272 ORTHO05D009305 3.3e-23 114.0 129 46.5
Hma1.2p1_0449F.1_g155150 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 1.4e-21 108.6 166 40.4
Hma1.2p1_2982F.1_g331245 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 1.4e-21 108.6 166 40.4
Hma1.2p1_2982F.1_g331250 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 9.0e-21 105.9 73 68.5
ATR0693G009 Amborella trichopoda HOM05D007272 ORTHO05D009305 6.4e-19 99.8 148 40.5
SGA_v2.0_scaffold52G19082 Striga asiatica HOM05D007272 ORTHO05D009305 9.3e-18 95.9 152 38.8
CDE04G1434 Ceratophyllum demersum HOM05D007272 ORTHO05D009305 4.3e-15 87.0 134 38.8
SGA_v2.0_scaffold52G19148 Striga asiatica HOM05D007272 ORTHO05D009305 5.6e-15 86.7 108 44.4
HanXRQChr07g0191831 Helianthus annuus HOM05D007272 ORTHO05D009305 2.1e-14 84.7 74 58.1
MELO3C030970.2 Cucumis melo HOM05D007272 ORTHO05D009305 4.8e-14 83.6 60 65.0
Dinv33460 Davidia involucrata HOM05D007272 ORTHO05D010159 1.7e-11 75.1 52 59.6
FAN19G2836 Fragaria x ananassa HOM05D007272 ORTHO05D045475 1.9e-10 71.6 40 80.0
SGA_v2.0_scaffold52G19157 Striga asiatica HOM05D016586 ORTHO05D009305 1.3e-08 65.5 74 43.2
Lsat_1_v5_gn_0_39820 Lactuca sativa HOM05D004386 ORTHO05D005247 6.7e-08 63.2 298 22.8
MSTRG.9273 Avicennia marina HOM05D003769 ORTHO05D004521 1.9e-07 61.6 246 27.6
Nn4g23791 Nelumbo nucifera HOM05D003769 ORTHO05D004521 2.5e-07 61.2 246 29.3
SMO358G0628 Selaginella moellendorffii HOM05D004758 ORTHO05D006063 5.6e-07 60.1 221 26.7
ECA233G5984 Erigeron canadensis HOM05D003769 ORTHO05D004521 1.3e-06 58.9 251 27.1
Aa31LG10G4900 Aethionema arabicum HOM05D003769 ORTHO05D004521 1.6e-06 58.5 252 27.8
A09p57830 Brassica napus HOM05D004736 ORTHO05D006424 2.8e-06 57.8 268 25.0
CDE01G0336 Ceratophyllum demersum HOM05D003769 ORTHO05D004521 3.7e-06 57.4 257 25.7
Duzib248G0831 Durio zibethinus HOM05D000453 ORTHO05D000387 4.8e-06 57.0 118 33.9
PRCOL_00000749 Prasinoderma coloniale HOM05D005961 ORTHO05D007391 4.8e-06 57.0 210 25.7
Zm00001eb326820 Zea mays HOM05D005508 ORTHO05D006882 8.1e-06 56.2 284 23.9


User provided reference genes

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