Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G025900 Phaseolus vulgaris HOM05D008333 ORTHO05D010371 9.0e-90 333.6 169 100.0
VMungo0464G0738 Vigna mungo HOM05D008333 ORTHO05D010371 2.0e-68 262.7 169 82.2
Glyma.18G255500 Glycine max HOM05D008333 ORTHO05D010371 4.7e-30 135.2 137 52.6
TPR.G7262 Trifolium pratense HOM05D008333 ORTHO05D010371 1.1e-26 124.0 128 53.1
QL02p080535 Quercus lobata HOM05D008333 ORTHO05D010371 5.2e-21 105.1 157 38.2
CiPaw.03G030300 Carya illinoinensis HOM05D008333 ORTHO05D010371 6.4e-19 98.2 142 39.4
Cfa007508 Carpinus fangiana HOM05D008333 ORTHO05D010371 1.6e-17 93.6 133 39.8
Cfa021167 Carpinus fangiana HOM05D008333 ORTHO05D010371 3.5e-17 92.4 117 41.0
Haze_14585 Corylus avellana HOM05D008333 ORTHO05D010371 1.7e-16 90.1 117 41.0
COL.COLO4_25183 Corchorus olitorius HOM05D008333 ORTHO05D010371 5.1e-16 88.6 117 41.9
Manes.17G020900 Manihot esculenta HOM05D008333 ORTHO05D010371 6.6e-16 88.2 112 42.0
Duzib147G0630 Durio zibethinus HOM05D008333 ORTHO05D010371 1.9e-15 86.7 130 39.2
Glyma.13G065300 Glycine max HOM05D036391 ORTHO05D035925 1.9e-15 86.7 127 41.7
RcHm_v2.0_Chr2g0169181 Rosa chinensis HOM05D008333 ORTHO05D010371 6.2e-14 81.6 134 32.1
Prupe.3G272200 Prunus persica HOM05D008333 ORTHO05D010371 1.4e-13 80.5 156 30.1
FvH4_6g49320 Fragaria vesca HOM05D008333 ORTHO05D010371 2.3e-13 79.7 123 33.3
FAN14G5614 Fragaria x ananassa HOM05D008333 ORTHO05D010371 2.3e-13 79.7 123 33.3
RcHm_v2.0_Chr2g0169171 Rosa chinensis HOM05D008333 ORTHO05D010371 4.0e-13 79.0 112 34.8
Gohir.D11G275775 Gossypium hirsutum HOM05D008333 ORTHO05D010371 1.2e-12 77.4 111 40.5
FAN14G1695 Fragaria x ananassa HOM05D008333 ORTHO05D010371 2.0e-12 76.6 123 31.7
FAN14G3781 Fragaria x ananassa HOM05D000349 ORTHO05D001782 2.0e-12 76.6 123 31.7
Gorai.006G024100 Gossypium raimondii HOM05D008333 ORTHO05D010371 2.0e-12 76.6 137 32.1
Potri.017G077100 Populus trichocarpa HOM05D008333 ORTHO05D010371 2.0e-12 76.6 122 32.0
FvH4_6g49300 Fragaria vesca HOM05D008333 ORTHO05D010371 2.6e-12 76.3 150 30.0
Gorai.007G297900 Gossypium raimondii HOM05D008333 ORTHO05D010371 2.6e-12 76.3 111 39.6
Gohir.A09G021000 Gossypium hirsutum HOM05D008333 ORTHO05D010371 3.4e-12 75.9 137 32.8
TAR481G0008 Trochodendron aralioides HOM05D008333 ORTHO05D010371 2.9e-11 72.8 127 31.5
Thecc.04G074300 Theobroma cacao HOM05D008333 ORTHO05D010371 4.9e-11 72.0 112 41.1
Eucgr.L02760 Eucalyptus grandis HOM05D008333 ORTHO05D010371 6.4e-11 71.6 111 38.7
TAR481G0013 Trochodendron aralioides HOM05D008333 ORTHO05D010371 6.4e-11 71.6 127 30.7
Eucgr.I01914 Eucalyptus grandis HOM05D008333 ORTHO05D010371 1.4e-10 70.5 111 37.8
Eucgr.I01916 Eucalyptus grandis HOM05D008333 ORTHO05D010371 2.4e-10 69.7 117 37.6
Gorai.006G023800 Gossypium raimondii HOM05D008333 ORTHO05D010371 7.1e-10 68.2 104 36.5
VMungo0464G0892 Vigna mungo HOM05D036391 ORTHO05D035925 3.5e-09 65.9 124 32.3
Gohir.D09G020400 Gossypium hirsutum HOM05D008333 ORTHO05D010371 1.0e-08 64.3 124 31.5
Rhsim08G0065300 Rhododendron simsii HOM05D008333 ORTHO05D010371 3.0e-08 62.8 122 33.6
Lj7P401T71 Lonicera japonica HOM05D008333 ORTHO05D010371 5.1e-08 62.0 139 27.3
Rhsim08G0065400 Rhododendron simsii HOM05D008333 ORTHO05D010371 1.5e-07 60.5 152 31.6
Rhsim08G0065700 Rhododendron simsii HOM05D008333 ORTHO05D010371 5.6e-07 58.5 135 34.1
Rhsim08G0065100 Rhododendron simsii HOM05D008333 ORTHO05D010371 7.3e-07 58.2 135 33.3
Rhsim08G0065800 Rhododendron simsii HOM05D008333 ORTHO05D010371 7.3e-07 58.2 132 31.8
Gohir.A11G265601 Gossypium hirsutum HOM05D008333 ORTHO05D010371 2.1e-06 56.6 119 32.8
Rhsim08G0065000 Rhododendron simsii HOM05D008333 ORTHO05D010371 2.1e-06 56.6 104 33.7
Rhsim08G0065600 Rhododendron simsii HOM05D008333 ORTHO05D010371 2.1e-06 56.6 104 33.7
Gohir.D09G020550 Gossypium hirsutum HOM05D008333 ORTHO05D010371 3.6e-06 55.8 92 37.0
Rhsim08G0065200 Rhododendron simsii HOM05D008333 ORTHO05D010371 8.1e-06 54.7 103 34.0


User provided reference genes

Program Settings