Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G023300 Phaseolus vulgaris HOM05D007804 ORTHO05D009828 9.2e-88 327.0 185 100.0
VMungo0464G0276 Vigna mungo HOM05D007804 ORTHO05D009828 4.2e-64 248.4 189 82.0
Glyma.13G067400 Glycine max HOM05D007804 ORTHO05D009828 6.5e-57 224.6 191 79.6
Glyma.19G017000 Glycine max HOM05D007804 ORTHO05D009828 4.6e-55 218.4 191 79.1
Lalb_Chr21g0319161 Lupinus albus HOM05D007804 ORTHO05D009828 2.5e-45 186.0 194 64.9
Medtr6g009320 Medicago truncatula HOM05D007804 ORTHO05D009828 3.3e-45 185.7 193 65.3
TPR.G32605 Trifolium pratense HOM05D007804 ORTHO05D009828 2.0e-42 176.4 196 62.2
Psat1g077320 Pisum sativum HOM05D007804 ORTHO05D009828 4.5e-42 175.3 193 58.0
Lj2g0027470 Lotus japonicus HOM05D007804 ORTHO05D009828 3.8e-41 172.2 194 63.9
Psat1g077160 Pisum sativum HOM05D007804 ORTHO05D009828 2.8e-36 156.0 195 59.5
Lalb_Chr02g0159931 Lupinus albus HOM05D007804 ORTHO05D009828 2.2e-33 146.4 195 59.5
Thecc.04G069800 Theobroma cacao HOM05D007804 ORTHO05D009828 7.5e-21 104.8 181 42.0
Duzib147G0590 Durio zibethinus HOM05D007804 ORTHO05D009828 6.3e-20 101.7 169 39.1
Cfa007487 Carpinus fangiana HOM05D007804 ORTHO05D009828 9.1e-19 97.8 174 41.4
CiPaw.03G032600 Carya illinoinensis HOM05D007804 ORTHO05D009828 2.0e-18 96.7 185 40.5
Prupe.3G275600 Prunus persica HOM05D007804 ORTHO05D009828 2.9e-17 92.8 183 41.0
Gohir.D09G022600 Gossypium hirsutum HOM05D007804 ORTHO05D009828 3.8e-17 92.4 164 46.3
QL02p079311 Quercus lobata HOM05D007804 ORTHO05D009828 6.5e-17 91.7 189 40.2
Gorai.006G026600 Gossypium raimondii HOM05D007804 ORTHO05D009828 1.5e-16 90.5 163 47.2
Manes.17G117500 Manihot esculenta HOM05D007804 ORTHO05D009828 1.6e-15 87.0 164 38.4
Ciclev10012771m.g Citrus clementina HOM05D007804 ORTHO05D009828 2.7e-15 86.3 178 42.1
Gohir.A09G023300 Gossypium hirsutum HOM05D007804 ORTHO05D009828 6.1e-15 85.1 162 46.3
Manes.15G177500 Manihot esculenta HOM05D007804 ORTHO05D009828 8.0e-15 84.7 178 38.8
COL.COLO4_36996 Corchorus olitorius HOM05D007804 ORTHO05D009828 1.8e-14 83.6 161 38.5
Cpa.g.sc14.66 Carica papaya HOM05D007804 ORTHO05D009828 4.0e-14 82.4 173 37.6
Aa31LG2G4650 Aethionema arabicum HOM05D007804 ORTHO05D009828 5.2e-14 82.0 191 34.0
THA.LOC104805425 Tarenaya hassleriana HOM05D007804 ORTHO05D009828 5.2e-14 82.0 217 35.0
RcHm_v2.0_Chr2g0169751 Rosa chinensis HOM05D007804 ORTHO05D009828 1.2e-13 80.9 178 37.6
FvH4_6g49720 Fragaria vesca HOM05D007804 ORTHO05D009828 1.5e-13 80.5 177 37.9
FAN14G3729 Fragaria x ananassa HOM05D007804 ORTHO05D009828 1.5e-13 80.5 177 37.9
FAN05G0497 Fragaria x ananassa HOM05D007804 ORTHO05D009828 2.0e-13 80.1 177 38.4
Peaxi162Scf00129g00628 Petunia axillaris HOM05D007804 ORTHO05D009828 2.6e-13 79.7 170 37.6
FAN02G3435 Fragaria x ananassa HOM05D007804 ORTHO05D009828 4.4e-13 79.0 177 38.4
FAN09G3343 Fragaria x ananassa HOM05D007804 ORTHO05D009828 5.7e-13 78.6 176 38.1
CARHR292560 Cardamine hirsuta HOM05D007804 ORTHO05D009828 1.3e-12 77.4 192 33.3
CSS0004616 Camellia sinensis var. sinensis HOM05D007804 ORTHO05D009828 4.8e-12 75.5 174 43.1
Sp2g17190 Schrenkiella parvula HOM05D007804 ORTHO05D009828 6.3e-12 75.1 195 32.3
BcaB07g30130 Brassica carinata HOM05D007804 ORTHO05D009828 1.1e-11 74.3 193 34.7
ClCG09G018550 Citrullus lanatus HOM05D007804 ORTHO05D009828 1.1e-11 74.3 178 40.4
Manes.17G120501 Manihot esculenta HOM05D007804 ORTHO05D009828 1.8e-11 73.6 172 34.3
BcaC03g17515 Brassica carinata HOM05D007804 ORTHO05D009828 5.4e-11 72.0 195 32.3
C02p54770 Brassica napus HOM05D007804 ORTHO05D009828 5.4e-11 72.0 195 32.3
BolC2t11538H Brassica oleracea HOM05D007804 ORTHO05D009828 5.4e-11 72.0 195 32.3
MELO3C021487.2 Cucumis melo HOM05D007804 ORTHO05D009828 7.0e-11 71.6 178 39.9
CsaV3_5G037680 Cucumis sativus L. HOM05D007804 ORTHO05D009828 7.0e-11 71.6 179 43.6
Lsat_1_v5_gn_4_180340 Lactuca sativa HOM05D007804 ORTHO05D009828 7.0e-11 71.6 162 36.4
Thhalv10004896m.g Eutrema salsugineum HOM05D007804 ORTHO05D009828 1.2e-10 70.9 198 32.8
A06p40550 Brassica napus HOM05D007804 ORTHO05D009828 1.6e-10 70.5 188 34.0
BraA06t26974Z Brassica rapa HOM05D007804 ORTHO05D009828 1.6e-10 70.5 188 34.0
Nitab4.5_0002265g0080 Nicotiana tabacum HOM05D007804 ORTHO05D009828 1.6e-10 70.5 171 35.7
Actinidia02723 Actinidia chinensis HOM05D007804 ORTHO05D009828 2.0e-10 70.1 177 33.9
Migut.K01348 Erythranthe guttata HOM05D007804 ORTHO05D009828 2.0e-10 70.1 160 33.8
Rhsim08G0063700 Rhododendron simsii HOM05D007804 ORTHO05D009828 2.0e-10 70.1 166 36.7
Sed0002452 Sechium edule HOM05D007804 ORTHO05D009828 2.0e-10 70.1 181 43.6
PGSC0003DMG402001401 Solanum tuberosum HOM05D007804 ORTHO05D009828 2.0e-10 70.1 174 35.1
SGA_v2.0_scaffold135G34801 Striga asiatica HOM05D007804 ORTHO05D009828 2.0e-10 70.1 164 35.4
Nitab4.5_0001239g0070 Nicotiana tabacum HOM05D007804 ORTHO05D009828 2.7e-10 69.7 173 34.7
Solyc02g087440.4 Solanum lycopersicum HOM05D007804 ORTHO05D009828 2.7e-10 69.7 165 37.0
Oeu017303.1 Olea europaea HOM05D007804 ORTHO05D009828 3.5e-10 69.3 162 34.6
Sopen02g032190 Solanum pennellii HOM05D007804 ORTHO05D009828 3.5e-10 69.3 165 37.0
AT3G28420 Arabidopsis thaliana HOM05D007804 ORTHO05D009828 4.5e-10 68.9 197 36.0
A02p35930 Brassica napus HOM05D007804 ORTHO05D009828 4.5e-10 68.9 190 32.6
BraA02t08592Z Brassica rapa HOM05D007804 ORTHO05D009828 4.5e-10 68.9 187 32.6
BcaC06g30917 Brassica carinata HOM05D007804 ORTHO05D009828 1.3e-09 67.4 173 35.3
TAR622G0153 Trochodendron aralioides HOM05D007804 ORTHO05D009828 1.7e-09 67.0 172 30.8
AL5G18030 Arabidopsis lyrata HOM05D007804 ORTHO05D009828 2.3e-09 66.6 192 32.8
MSTRG.23968 Avicennia marina HOM05D007804 ORTHO05D009828 3.8e-09 65.9 161 37.3
Nn3g17058 Nelumbo nucifera HOM05D007804 ORTHO05D009828 3.8e-09 65.9 175 32.0
Carub.0005s0691 Capsella rubella HOM05D007804 ORTHO05D009828 5.0e-09 65.5 179 33.5
Migut.H00872 Erythranthe guttata HOM05D007804 ORTHO05D009828 6.5e-09 65.1 181 34.3
Sed0004613 Sechium edule HOM05D007804 ORTHO05D009828 6.5e-09 65.1 174 41.4
Sed0005835 Sechium edule HOM05D007804 ORTHO05D009828 6.5e-09 65.1 174 41.4
C07p37470 Brassica napus HOM05D000068 ORTHO05D009828 2.5e-08 63.2 187 31.6
BolC7t44259H Brassica oleracea HOM05D000068 ORTHO05D009828 3.2e-08 62.8 187 31.6
Oeu027756.1 Olea europaea HOM05D007804 ORTHO05D009828 3.2e-08 62.8 162 34.0
Nn4g22964 Nelumbo nucifera HOM05D007804 ORTHO05D009828 4.2e-08 62.4 174 32.2
Atru.chr8.2473 Acer truncatum HOM05D007804 ORTHO05D009828 1.2e-07 60.8 188 36.7
SalBow1G7839 Salvia bowleyana HOM05D007804 ORTHO05D009828 1.2e-07 60.8 163 33.7
BcaC06g33740 Brassica carinata HOM05D007804 ORTHO05D009828 2.1e-07 60.1 175 32.6
TWI36G0430 Tripterygium wilfordii HOM05D007804 ORTHO05D009828 2.1e-07 60.1 149 33.6
DCAR_011178 Daucus carota HOM05D007804 ORTHO05D009828 3.6e-07 59.3 167 31.1
CAN.G206.83 Capsicum annuum HOM05D007804 ORTHO05D009828 4.7e-07 58.9 175 32.0
ECA232G1800 Erigeron canadensis HOM05D007804 ORTHO05D009828 6.8e-06 55.1 166 31.9


User provided reference genes

Program Settings