Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G012300 Phaseolus vulgaris HOM05D005169 ORTHO05D006436 3.8e-44 181.8 148 100.0
VMungo0464G1178 Vigna mungo HOM05D005169 ORTHO05D006436 8.9e-25 117.5 170 75.3
Glyma.19G006800 Glycine max HOM05D005169 ORTHO05D006436 5.4e-22 108.2 158 46.2
Glyma.05G006400 Glycine max HOM05D005169 ORTHO05D006436 1.3e-20 103.6 147 50.3
Medtr6g406210 Medicago truncatula HOM05D005169 ORTHO05D006436 9.2e-14 80.9 146 36.3
CiPaw.03G039400 Carya illinoinensis HOM05D005169 ORTHO05D006436 6.2e-10 68.2 143 32.2
Actinidia36094 Actinidia chinensis HOM05D005169 ORTHO05D006436 1.1e-09 67.4 126 32.5
EL10Ac1g00764 Beta vulgaris HOM05D005169 ORTHO05D006436 1.8e-09 66.6 158 30.4
Cfa007415 Carpinus fangiana HOM05D005169 ORTHO05D006436 2.4e-09 66.2 143 30.8
Haze_14687 Corylus avellana HOM05D005169 ORTHO05D006436 2.4e-09 66.2 144 30.6
CSS0037801 Camellia sinensis var. sinensis HOM05D005169 ORTHO05D006436 3.1e-09 65.9 147 31.3
vmacro05837 Vaccinium macrocarpon HOM05D005169 ORTHO05D006436 3.1e-09 65.9 144 29.9
Ciclev10016934m.g Citrus clementina HOM05D005169 ORTHO05D006436 8.9e-09 64.3 124 35.5
Psat1g056720 Pisum sativum HOM05D005169 ORTHO05D006436 8.9e-09 64.3 157 31.2
Psat1g056600 Pisum sativum HOM05D005169 ORTHO05D006436 1.2e-08 63.9 139 31.7
MD17G1033200 Malus domestica HOM05D005169 ORTHO05D006436 2.0e-08 63.2 144 29.9
Oeu014861.1 Olea europaea HOM05D005169 ORTHO05D006436 2.6e-08 62.8 123 30.9
Rhsim10G0020400 Rhododendron simsii HOM05D005169 ORTHO05D006256 2.6e-08 62.8 129 36.4
Dinv35078 Davidia involucrata HOM05D005169 ORTHO05D006436 3.4e-08 62.4 136 30.1
Lalb_Chr21g0319501 Lupinus albus HOM05D005169 ORTHO05D006436 3.4e-08 62.4 145 48.3
AUR62023410 Chenopodium quinoa HOM05D005169 ORTHO05D006436 4.4e-08 62.0 164 30.5
Dinv33480 Davidia involucrata HOM05D005169 ORTHO05D006436 4.4e-08 62.0 137 29.9
Prupe.3G286300 Prunus persica HOM05D005169 ORTHO05D006436 4.4e-08 62.0 140 37.1
TWI56G0416 Tripterygium wilfordii HOM05D005169 ORTHO05D006436 4.4e-08 62.0 153 38.6
AUR62013741 Chenopodium quinoa HOM05D005169 ORTHO05D006436 9.9e-08 60.8 164 30.5
TAR622G1423 Trochodendron aralioides HOM05D005169 ORTHO05D006436 9.9e-08 60.8 130 31.5
Nitab4.5_0002306g0060 Nicotiana tabacum HOM05D005169 ORTHO05D006436 1.3e-07 60.5 146 30.1
Peaxi162Scf00700g00522 Petunia axillaris HOM05D005169 ORTHO05D006436 1.7e-07 60.1 144 30.6
COL.COLO4_28998 Corchorus olitorius HOM05D005169 ORTHO05D006436 2.2e-07 59.7 171 30.4
Nn3g16854 Nelumbo nucifera HOM05D005169 ORTHO05D006436 2.2e-07 59.7 156 28.8
TPR.G35382 Trifolium pratense HOM05D005169 ORTHO05D006436 2.9e-07 59.3 89 40.4
Gohir.D11G070900 Gossypium hirsutum HOM05D005169 ORTHO05D006436 3.8e-07 58.9 145 29.7
Gorai.007G076200 Gossypium raimondii HOM05D005169 ORTHO05D006436 3.8e-07 58.9 145 29.7
Thecc.04G011300 Theobroma cacao HOM05D005169 ORTHO05D006436 3.8e-07 58.9 164 43.3
Gohir.A11G067000 Gossypium hirsutum HOM05D005169 ORTHO05D006436 6.4e-07 58.2 148 29.7
Gohir.D09G026600 Gossypium hirsutum HOM05D005169 ORTHO05D006436 8.4e-07 57.8 139 33.8
Gorai.006G030600 Gossypium raimondii HOM05D005169 ORTHO05D006436 8.4e-07 57.8 139 30.9
Manes.15G165700 Manihot esculenta HOM05D005169 ORTHO05D006436 8.4e-07 57.8 159 41.5
MELO3C021551.2 Cucumis melo HOM05D005169 ORTHO05D006436 1.1e-06 57.4 141 31.2
FvH4_6g50860 Fragaria vesca HOM05D005169 ORTHO05D006436 1.1e-06 57.4 168 36.3
FAN05G3636 Fragaria x ananassa HOM05D005169 ORTHO05D006436 1.1e-06 57.4 167 40.1
MBI16_g27097_MAGBIO Magnolia biondii HOM05D005169 ORTHO05D006436 1.1e-06 57.4 140 32.9
Nitab4.5_0002416g0060 Nicotiana tabacum HOM05D005169 ORTHO05D006436 1.1e-06 57.4 150 28.0
Sed0004184 Sechium edule HOM05D005169 ORTHO05D006436 1.1e-06 57.4 141 39.0
Ah.05g173110 Amaranthus hybridus HOM05D005169 ORTHO05D006436 2.4e-06 56.2 161 27.3
FAN09G4345 Fragaria x ananassa HOM05D005169 ORTHO05D006436 2.4e-06 56.2 149 30.2
Cc07_g02080 Coffea canephora HOM05D005169 ORTHO05D006436 3.2e-06 55.8 162 27.8
Lalb_Chr06g0175951 Lupinus albus HOM05D005169 ORTHO05D006436 3.2e-06 55.8 149 30.9
arahy.Tifrunner.gnm1.ann1.SA5TEJ Arachis hypogaea HOM05D005169 ORTHO05D006436 4.2e-06 55.5 181 49.2
CANSAT64G1588 Cannabis sativa HOM05D005169 ORTHO05D006436 4.2e-06 55.5 144 29.9
CsaV3_5G027330 Cucumis sativus L. HOM05D005169 ORTHO05D005030 4.2e-06 55.5 151 29.1
FAN14G0546 Fragaria x ananassa HOM05D005169 ORTHO05D006436 4.2e-06 55.5 152 43.4
QL02p075994 Quercus lobata HOM05D005169 ORTHO05D006436 4.2e-06 55.5 157 29.3
ATR0730G202 Amborella trichopoda HOM05D005169 ORTHO05D006436 5.4e-06 55.1 121 33.1
Gohir.A09G026900 Gossypium hirsutum HOM05D005169 ORTHO05D006436 7.1e-06 54.7 140 30.0
ClCG09G019030 Citrullus lanatus HOM05D005169 ORTHO05D006436 9.2e-06 54.3 134 29.1


User provided reference genes

Program Settings