Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G010900 Phaseolus vulgaris HOM05D008092 ORTHO05D010277 4.5e-144 514.6 267 100.0
VMungo0464G1885 Vigna mungo HOM05D008092 ORTHO05D010277 1.8e-113 412.9 268 79.9
Glyma.05G005000 Glycine max HOM05D008092 ORTHO05D010277 8.6e-103 377.5 267 75.3
arahy.Tifrunner.gnm1.ann1.M07V8F Arachis hypogaea HOM05D008092 ORTHO05D010277 4.2e-73 278.9 268 60.4
arahy.Tifrunner.gnm1.ann1.KZ8L38 Arachis hypogaea HOM05D008092 ORTHO05D010277 5.1e-71 271.9 264 59.8
Glyma.19G005600 Glycine max HOM05D008092 ORTHO05D010277 2.5e-70 269.6 184 75.5
Lj2g0022146 Lotus japonicus HOM05D008092 ORTHO05D010277 5.6e-70 268.5 266 61.7
TPR.G14075 Trifolium pratense HOM05D008092 ORTHO05D010277 1.3e-63 247.3 261 55.2
Psat1g056120 Pisum sativum HOM05D008092 ORTHO05D010277 6.7e-63 245.0 249 58.2
Lalb_Chr02g0156941 Lupinus albus HOM05D008092 ORTHO05D010277 1.2e-56 224.2 183 60.7
Medtr6g005430 Medicago truncatula HOM05D008092 ORTHO05D010277 3.0e-55 219.5 250 53.2
CiPaw.03G041800 Carya illinoinensis HOM05D008092 ORTHO05D010277 1.0e-47 194.5 181 56.9
QL02p075225 Quercus lobata HOM05D008092 ORTHO05D010277 2.3e-47 193.4 166 60.8
QL93p1842_0091 Quercus lobata HOM05D008092 ORTHO05D010277 3.0e-47 193.0 166 60.8
Cfa007393 Carpinus fangiana HOM05D008092 ORTHO05D010277 6.7e-47 191.8 179 54.7
CiPaw.02G035400 Carya illinoinensis HOM05D008092 ORTHO05D010277 4.8e-45 185.7 177 55.9
CANSAT64G0606 Cannabis sativa HOM05D008092 ORTHO05D010277 9.4e-41 171.4 214 46.7
Manes.17G115000 Manihot esculenta HOM05D008092 ORTHO05D010277 2.3e-39 166.8 199 48.7
CiPaw.04G027500 Carya illinoinensis HOM05D008092 ORTHO05D010277 6.7e-39 165.2 245 43.3
TAR374G1215 Trochodendron aralioides HOM05D008092 ORTHO05D010277 1.1e-38 164.5 231 45.0
GSVIVG01032429001 Vitis vinifera HOM05D008092 ORTHO05D010277 2.0e-38 163.7 206 47.1
Dinv33463 Davidia involucrata HOM05D008092 ORTHO05D010277 2.5e-38 163.3 192 48.4
Prupe.3G289300 Prunus persica HOM05D008092 ORTHO05D010277 6.3e-37 158.7 220 46.8
TWI36G1451 Tripterygium wilfordii HOM05D008092 ORTHO05D010277 1.1e-36 157.9 178 50.0
Duzib187G1326 Durio zibethinus HOM05D008092 ORTHO05D010277 9.1e-36 154.8 178 48.3
Gohir.A10G102700 Gossypium hirsutum HOM05D008092 ORTHO05D010277 2.0e-35 153.7 178 46.6
Gohir.D10G086900 Gossypium hirsutum HOM05D008092 ORTHO05D010277 2.0e-35 153.7 177 46.9
Gorai.011G095100 Gossypium raimondii HOM05D008092 ORTHO05D010277 2.0e-35 153.7 178 46.6
Atru.chr6.2355 Acer truncatum HOM05D008092 ORTHO05D010277 4.5e-35 152.5 175 49.7
Thecc.04G015000 Theobroma cacao HOM05D008092 ORTHO05D010277 1.3e-34 151.0 178 46.1
COL.COLO4_29084 Corchorus olitorius HOM05D008092 ORTHO05D010277 2.2e-34 150.2 186 44.6
Actinidia06006 Actinidia chinensis HOM05D008092 ORTHO05D010277 3.2e-33 146.4 189 45.5
MD17G1030500 Malus domestica HOM05D008092 ORTHO05D010277 3.2e-33 146.4 179 49.2
CSS0000484 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 6.7e-31 138.7 193 43.5
CSS0015151 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 8.8e-31 138.3 187 43.9
vmacro05852 Vaccinium macrocarpon HOM05D008092 ORTHO05D010277 3.3e-30 136.3 186 43.5
Sc03g0007590 Simmondsia chinensis HOM05D008092 ORTHO05D010277 9.7e-30 134.8 175 42.9
MBI10_g33304_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 1.7e-29 134.0 218 37.6
Cpa.g.sc108.51 Carica papaya HOM05D008092 ORTHO05D010277 4.8e-29 132.5 175 46.3
Cc00_g25440 Coffea canephora HOM05D008092 ORTHO05D010277 6.3e-29 132.1 191 41.9
TPR.G15211 Trifolium pratense HOM05D008092 ORTHO05D010277 7.0e-28 128.6 113 60.2
PGR083G2137 Punica granatum HOM05D008092 ORTHO05D010277 9.1e-28 128.3 167 43.1
Nitab4.5_0000118g0190 Nicotiana tabacum HOM05D008092 ORTHO05D010277 1.2e-27 127.9 160 48.8
CDE02G4384 Ceratophyllum demersum HOM05D008092 ORTHO05D010277 1.3e-26 124.4 175 40.6
Lsat_1_v5_gn_4_183520 Lactuca sativa HOM05D008092 ORTHO05D010277 8.5e-26 121.7 184 41.8
CsaV3_3G042670 Cucumis sativus L. HOM05D008092 ORTHO05D010277 5.5e-25 119.0 190 39.5
MBI10_g44380_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 1.6e-24 117.5 218 35.3
DCAR_021714 Daucus carota HOM05D008092 ORTHO05D010277 3.6e-24 116.3 130 47.7
Eucgr.I01759 Eucalyptus grandis HOM05D008092 ORTHO05D010277 4.7e-24 115.9 121 50.4
HanXRQChr09g0255051 Helianthus annuus HOM05D008092 ORTHO05D010277 8.0e-24 115.2 177 41.8
Rhsim10G0018500 Rhododendron simsii HOM05D008092 ORTHO05D010277 8.0e-24 115.2 228 36.0
HPP92_003083 Vanilla planifolia HOM05D008092 ORTHO05D010277 2.2e-21 107.1 166 38.6
Eucgr.I01763 Eucalyptus grandis HOM05D008092 ORTHO05D010277 9.1e-20 101.7 112 50.0
Haze_14716 Corylus avellana HOM05D008092 ORTHO05D010277 2.0e-19 100.5 158 41.8
ECA232G1487 Erigeron canadensis HOM05D008092 ORTHO05D010277 4.5e-19 99.4 161 39.8
Haze_14721 Corylus avellana HOM05D008092 ORTHO05D010277 2.9e-18 96.7 154 40.9
TPR.G11017 Trifolium pratense HOM05D008092 ORTHO05D010277 1.3e-13 81.3 55 70.9
PSO478G3237 Papaver somniferum HOM05D008092 ORTHO05D010277 4.8e-13 79.3 69 52.2
Nn3g16773 Nelumbo nucifera HOM05D008092 ORTHO05D010277 1.1e-12 78.2 66 54.5
PSO017G5173 Papaver somniferum HOM05D008092 ORTHO05D010277 1.4e-12 77.8 69 50.7
Nitab4.5_0002306g0010 Nicotiana tabacum HOM05D008092 ORTHO05D010277 1.6e-08 64.3 111 41.4
Oeu063467.1 Olea europaea HOM05D008092 ORTHO05D010277 2.1e-08 63.9 228 28.5
Mapoly0035s0098 Marchantia polymorpha HOM05D008092 ORTHO05D010277 2.7e-08 63.5 190 30.0
MELO3C009977.2 Cucumis melo HOM05D008092 ORTHO05D010277 8.0e-08 62.0 108 39.8


User provided reference genes

Program Settings