Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G009400 Phaseolus vulgaris HOM05D000747 ORTHO05D031555 5.0e-51 204.1 102 100.0
Phvul.006G120900 Phaseolus vulgaris HOM05D000747 ORTHO05D004807 5.7e-39 164.1 92 88.0
Glyma.15G137000 Glycine max HOM05D000747 ORTHO05D004807 1.6e-36 156.0 92 83.7
Lj6g0013861 Lotus japonicus HOM05D000747 ORTHO05D004807 4.7e-33 144.4 87 79.3
Lalb_Chr15g0089041 Lupinus albus HOM05D000747 ORTHO05D004807 8.0e-33 143.7 101 71.3
Phvul.004G005500 Phaseolus vulgaris HOM05D000747 ORTHO05D031555 1.0e-32 143.3 74 100.0
arahy.Tifrunner.gnm1.ann1.R130QB Arachis hypogaea HOM05D000747 ORTHO05D004807 1.4e-32 142.9 101 71.3
arahy.Tifrunner.gnm1.ann1.YUC3W2 Arachis hypogaea HOM05D000747 ORTHO05D004807 1.4e-32 142.9 101 71.3
Medtr2g033040 Medicago truncatula HOM05D000747 ORTHO05D004807 2.6e-31 138.7 101 68.3
Psat1g162680 Pisum sativum HOM05D000747 ORTHO05D004807 2.6e-31 138.7 101 68.3
arahy.Tifrunner.gnm1.ann1.NSV5VW Arachis hypogaea HOM05D000747 ORTHO05D004807 3.4e-31 138.3 101 69.3
Ca_00947_v3 Cicer arietinum L. HOM05D000747 ORTHO05D004807 3.4e-31 138.3 101 68.3
Glyma.17G037600 Glycine max HOM05D000747 ORTHO05D004807 4.4e-31 137.9 83 81.9
TPR.G10108 Trifolium pratense HOM05D000747 ORTHO05D004807 9.8e-31 136.7 87 74.7
arahy.Tifrunner.gnm1.ann1.CPQB8S Arachis hypogaea HOM05D000747 ORTHO05D004807 1.3e-30 136.3 101 69.3
Glyma.07G235800 Glycine max HOM05D000747 ORTHO05D004807 8.3e-30 133.7 83 79.5
CiPaw.01G133500 Carya illinoinensis HOM05D000747 ORTHO05D004807 3.1e-29 131.7 93 66.7
QL06p013303 Quercus lobata HOM05D000747 ORTHO05D004807 3.1e-29 131.7 93 66.7
Medtr2g033055 Medicago truncatula HOM05D000747 ORTHO05D004807 9.1e-29 130.2 101 66.3
FvH4_4g20760 Fragaria vesca HOM05D000747 ORTHO05D004807 1.7e-27 125.9 88 71.6
FAN17G1353 Fragaria x ananassa HOM05D000747 ORTHO05D004807 1.7e-27 125.9 88 71.6
VMungo1215G1053 Vigna mungo HOM05D000747 ORTHO05D004807 1.7e-27 125.9 101 67.3
CSS0023043 Camellia sinensis var. sinensis HOM05D000747 ORTHO05D004807 2.3e-27 125.6 76 75.0
Haze_00834 Corylus avellana HOM05D000747 ORTHO05D004807 2.3e-27 125.6 93 64.5
Atru.chr4.3105 Acer truncatum HOM05D000747 ORTHO05D004807 5.0e-27 124.4 83 69.9
Phvul.003G118500 Phaseolus vulgaris HOM05D000747 ORTHO05D004807 5.0e-27 124.4 96 68.8
FAN07G0175 Fragaria x ananassa HOM05D000747 ORTHO05D004807 6.5e-27 124.0 88 70.5
Nn3g21805 Nelumbo nucifera HOM05D000747 ORTHO05D004807 6.5e-27 124.0 79 75.9
TAR362G0993 Trochodendron aralioides HOM05D000747 ORTHO05D004807 6.5e-27 124.0 72 80.6
Manes.03G208600 Manihot esculenta HOM05D000747 ORTHO05D004807 8.6e-27 123.6 85 70.6
Sed0003045 Sechium edule HOM05D000747 ORTHO05D004807 8.6e-27 123.6 87 66.7
Dinv15128 Davidia involucrata HOM05D000747 ORTHO05D004807 1.1e-26 123.2 87 66.7
RcHm_v2.0_Chr4g0426201 Rosa chinensis HOM05D000747 ORTHO05D004807 1.1e-26 123.2 88 70.5
MELO3C021252.2 Cucumis melo HOM05D000747 ORTHO05D004807 1.5e-26 122.9 86 66.3
AT3G17205 Arabidopsis thaliana HOM05D000747 ORTHO05D004807 2.5e-26 122.1 92 66.3
Gohir.A09G241400 Gossypium hirsutum HOM05D000747 ORTHO05D004807 2.5e-26 122.1 85 67.1
Gohir.D09G242100 Gossypium hirsutum HOM05D000747 ORTHO05D004807 2.5e-26 122.1 85 67.1
Gorai.006G265700 Gossypium raimondii HOM05D000747 ORTHO05D004807 2.5e-26 122.1 85 67.1
AL3G30230 Arabidopsis lyrata HOM05D000747 ORTHO05D004807 3.3e-26 121.7 92 66.3
AUR62002590 Chenopodium quinoa HOM05D000747 ORTHO05D004807 4.2e-26 121.3 86 68.6
AUR62030014 Chenopodium quinoa HOM05D000747 ORTHO05D004807 4.2e-26 121.3 86 68.6
Carub.0003s1696 Capsella rubella HOM05D000747 ORTHO05D004807 5.5e-26 120.9 92 65.2
Cpa.g.sc146.73 Carica papaya HOM05D000747 ORTHO05D004807 5.5e-26 120.9 75 76.0
Rhsim04G0243000 Rhododendron simsii HOM05D000747 ORTHO05D004807 5.5e-26 120.9 73 78.1
Thecc.04G307300 Theobroma cacao HOM05D000747 ORTHO05D004807 5.5e-26 120.9 66 83.3
Nitab4.5_0001334g0040 Nicotiana tabacum HOM05D000747 ORTHO05D004807 7.2e-26 120.6 87 65.5
Solyc01g057900.3 Solanum lycopersicum HOM05D000747 ORTHO05D004807 7.2e-26 120.6 87 65.5
Sopen01g023220 Solanum pennellii HOM05D000747 ORTHO05D004807 7.2e-26 120.6 87 65.5
Actinidia18481 Actinidia chinensis HOM05D000747 ORTHO05D004807 9.5e-26 120.2 77 71.4
COL.COLO4_34559 Corchorus olitorius HOM05D000747 ORTHO05D004807 9.5e-26 120.2 77 74.0
Sabra10G0115600 Salix brachista HOM05D000747 ORTHO05D004807 9.5e-26 120.2 77 70.1
TAR633G1529 Trochodendron aralioides HOM05D000747 ORTHO05D004807 9.5e-26 120.2 70 80.0
Nitab4.5_0005403g0020 Nicotiana tabacum HOM05D000747 ORTHO05D004807 1.2e-25 119.8 87 65.5
Potri.008G101300 Populus trichocarpa HOM05D000747 ORTHO05D004807 1.2e-25 119.8 76 71.1
CANSAT78G0170 Cannabis sativa HOM05D000747 ORTHO05D004807 2.1e-25 119.0 87 67.8
CSS0019056 Camellia sinensis var. sinensis HOM05D000747 ORTHO05D004807 2.8e-25 118.6 77 66.2
MD16G1148200 Malus domestica HOM05D000747 ORTHO05D004807 2.8e-25 118.6 93 63.4
Potri.010G150000 Populus trichocarpa HOM05D000747 ORTHO05D004807 2.8e-25 118.6 82 67.1
Sp3g15400 Schrenkiella parvula HOM05D000747 ORTHO05D004807 2.8e-25 118.6 79 70.9
MD17G1270000 Malus domestica HOM05D000747 ORTHO05D004807 3.6e-25 118.2 93 62.4
THA.LOC104820321 Tarenaya hassleriana HOM05D000747 ORTHO05D004807 3.6e-25 118.2 71 77.5
GSVIVG01034942001 Vitis vinifera HOM05D000747 ORTHO05D004807 3.6e-25 118.2 77 70.1
Sed0005984 Sechium edule HOM05D000747 ORTHO05D004807 4.7e-25 117.9 86 65.1
Gohir.A10G175700 Gossypium hirsutum HOM05D000747 ORTHO05D004807 6.1e-25 117.5 86 65.1
Sabra08G0076600 Salix brachista HOM05D000747 ORTHO05D004807 6.1e-25 117.5 74 73.0
BcaB06g25812 Brassica carinata HOM05D000747 ORTHO05D004807 8.0e-25 117.1 79 70.9
BcaC05g28820 Brassica carinata HOM05D000747 ORTHO05D004807 8.0e-25 117.1 79 70.9
A05p32580 Brassica napus HOM05D000747 ORTHO05D004807 8.0e-25 117.1 79 70.9
C05p49250 Brassica napus HOM05D000747 ORTHO05D004807 8.0e-25 117.1 79 70.9
BolC5t33666H Brassica oleracea HOM05D000747 ORTHO05D004807 8.0e-25 117.1 79 70.9
BraA05t22082Z Brassica rapa HOM05D000747 ORTHO05D004807 8.0e-25 117.1 79 70.9
CAN.G170.17 Capsicum annuum HOM05D000747 ORTHO05D004807 8.0e-25 117.1 81 70.4
CAN.G170.20 Capsicum annuum HOM05D000747 ORTHO05D004807 8.0e-25 117.1 81 70.4
CAN.G3221.1 Capsicum annuum HOM05D000747 ORTHO05D004807 8.0e-25 117.1 81 70.4
Duzib212G0904 Durio zibethinus HOM05D000747 ORTHO05D004807 8.0e-25 117.1 85 64.7
Hma1.2p1_1096F.1_g256630 Hydrangea macrophylla HOM05D000747 ORTHO05D004807 8.0e-25 117.1 82 64.6
Duzib151G0433 Durio zibethinus HOM05D000747 ORTHO05D004807 1.0e-24 116.7 66 78.8
Gohir.D10G182300 Gossypium hirsutum HOM05D000747 ORTHO05D004807 1.0e-24 116.7 65 80.0
Gorai.011G204200 Gossypium raimondii HOM05D000747 ORTHO05D004807 1.0e-24 116.7 65 80.0
vmacro07974 Vaccinium macrocarpon HOM05D000747 ORTHO05D004807 1.0e-24 116.7 73 75.3
Ciclev10004231m.g Citrus clementina HOM05D000747 ORTHO05D004807 1.4e-24 116.3 96 62.5
Prupe.1G111600 Prunus persica HOM05D000747 ORTHO05D004807 1.4e-24 116.3 88 65.9
MBI18_g27389_MAGBIO Magnolia biondii HOM05D000747 ORTHO05D004807 1.8e-24 115.9 67 76.1
Ah.07g203890 Amaranthus hybridus HOM05D000747 ORTHO05D004807 3.0e-24 115.2 86 61.6
Cc03_g00480 Coffea canephora HOM05D000747 ORTHO05D004807 3.0e-24 115.2 87 62.1
DCAR_002525 Daucus carota HOM05D000747 ORTHO05D004807 3.0e-24 115.2 83 63.9
Eucgr.B03986 Eucalyptus grandis HOM05D000747 ORTHO05D004807 3.0e-24 115.2 71 73.2
Peaxi162Scf00126g01514 Petunia axillaris HOM05D000747 ORTHO05D004807 4.0e-24 114.8 87 63.2
Duzib052G0753 Durio zibethinus HOM05D000747 ORTHO05D004807 6.8e-24 114.0 66 77.3
MD13G1148100 Malus domestica HOM05D000747 ORTHO05D004807 6.8e-24 114.0 88 64.8
TWI53G1735 Tripterygium wilfordii HOM05D000747 ORTHO05D004807 8.9e-24 113.6 84 65.5
Oeu052157.1 Olea europaea HOM05D000747 ORTHO05D004807 1.2e-23 113.2 83 63.9
SalBow8G3583 Salvia bowleyana HOM05D000747 ORTHO05D004807 5.7e-23 110.9 77 62.3
EL10Ac3g06290 Beta vulgaris HOM05D000747 ORTHO05D004807 7.5e-23 110.5 82 64.6
BcaC09g48678 Brassica carinata HOM05D000747 ORTHO05D004807 9.8e-23 110.2 92 59.8
C01p47020 Brassica napus HOM05D000747 ORTHO05D004807 9.8e-23 110.2 92 59.8
BraA01t03772Z Brassica rapa HOM05D000747 ORTHO05D004807 9.8e-23 110.2 92 59.8
Sc25g0001570 Simmondsia chinensis HOM05D000747 ORTHO05D004807 9.8e-23 110.2 85 63.5
Aqoxy2G02629 Aquilegia oxysepala HOM05D000747 ORTHO05D004807 1.3e-22 109.8 70 72.9
SGA_v2.0_scaffold157G37358 Striga asiatica HOM05D000747 ORTHO05D004807 2.2e-22 109.0 87 58.6
Migut.G00024 Erythranthe guttata HOM05D000747 ORTHO05D004807 3.7e-22 108.2 87 57.5
MSTRG.10174 Avicennia marina HOM05D000747 ORTHO05D004807 8.3e-22 107.1 74 64.9
BolC1t04670H Brassica oleracea HOM05D000747 ORTHO05D004807 8.3e-22 107.1 92 58.7
ECA233G3437 Erigeron canadensis HOM05D000747 ORTHO05D004807 8.3e-22 107.1 81 65.4
unitig_88.g27699 Utricularia gibba HOM05D000747 ORTHO05D004807 8.3e-22 107.1 74 64.9
A01p37100 Brassica napus HOM05D000747 ORTHO05D004807 1.1e-21 106.7 74 67.6
BcaB04g20855 Brassica carinata HOM05D000747 ORTHO05D004807 1.8e-21 105.9 79 65.8
ATR0693G276 Amborella trichopoda HOM05D000747 ORTHO05D004807 2.4e-21 105.5 77 63.6
Aa31LG8G4180 Aethionema arabicum HOM05D000747 ORTHO05D004807 3.1e-21 105.1 77 64.9
HanXRQChr06g0182841 Helianthus annuus HOM05D000747 ORTHO05D004807 9.2e-21 103.6 101 53.5
Zm00001eb412620 Zea mays HOM05D000747 ORTHO05D004807 9.2e-21 103.6 86 58.1
CDE11G0596 Ceratophyllum demersum HOM05D000747 ORTHO05D004807 1.6e-20 102.8 67 67.2
SEGI_11859 Sequoiadendron giganteum HOM05D000747 ORTHO05D004807 1.6e-20 102.8 58 74.1
CDE05G1257 Ceratophyllum demersum HOM05D000747 ORTHO05D004807 2.7e-20 102.1 67 67.2
PGR031G1986 Punica granatum HOM05D000747 ORTHO05D004807 2.7e-20 102.1 87 56.3
PSO210G6954 Papaver somniferum HOM05D000747 ORTHO05D004807 7.8e-20 100.5 85 55.3
PSO761G0701 Papaver somniferum HOM05D000747 ORTHO05D004807 7.8e-20 100.5 85 55.3
Zm00001eb282520 Zea mays HOM05D000747 ORTHO05D004807 1.3e-19 99.8 85 57.6
HPP92_015992 Vanilla planifolia HOM05D000747 ORTHO05D004807 3.8e-19 98.2 65 63.1
HPP92_015995 Vanilla planifolia HOM05D000747 ORTHO05D004807 3.8e-19 98.2 65 63.1
Os05g0159000 Oryza sativa ssp. japonica HOM05D000747 ORTHO05D004807 1.9e-18 95.9 77 58.4
Aqoxy5G03355 Aquilegia oxysepala HOM05D000747 ORTHO05D004807 2.8e-17 92.0 60 70.0
arahy.Tifrunner.gnm1.ann1.G3UT94 Arachis hypogaea HOM05D000747 ORTHO05D031555 2.8e-17 92.0 74 66.2
Thhalv10019984m.g Eutrema salsugineum HOM05D000747 ORTHO05D004807 3.6e-17 91.7 59 72.9
Pp3c17_16520 Physcomitrium patens HOM05D000747 ORTHO05D004807 9.8e-15 83.6 63 57.1
Hund28791 Selenicereus undatus HOM05D000747 ORTHO05D004807 1.7e-14 82.8 61 68.9
Hund28792 Selenicereus undatus HOM05D000747 ORTHO05D004807 1.7e-14 82.8 61 68.9
Mapoly0140s0005 Marchantia polymorpha HOM05D000747 ORTHO05D004807 6.4e-14 80.9 62 53.2
Lsat_1_v5_gn_6_70541 Lactuca sativa HOM05D000747 ORTHO05D004807 8.3e-14 80.5 114 42.1
MD16G1155700 Malus domestica HOM05D000747 ORTHO05D004807 7.0e-13 77.4 93 48.4
SMO165G0153 Selaginella moellendorffii HOM05D000747 ORTHO05D004807 9.2e-13 77.0 60 46.7
AagrBONN_evm.TU.Sc2ySwM_340.498 Anthoceros agrestis HOM05D000747 ORTHO05D004807 5.0e-11 71.2 60 51.7
ClCG06G004370 Citrullus lanatus HOM05D000747 ORTHO05D004807 3.1e-08 62.0 86 39.5
SHI00091 Sapria himalayana HOM05D000747 ORTHO05D004807 2.6e-07 58.9 41 65.9


User provided reference genes

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