Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G009118 Phaseolus vulgaris HOM05D004010 ORTHO05D004995 2.3e-210 735.3 373 100.0
Phvul.004G009818 Phaseolus vulgaris HOM05D004010 ORTHO05D004995 1.2e-208 729.6 372 99.2
VMungo0464G1595 Vigna mungo HOM05D004010 ORTHO05D004995 8.7e-186 653.7 378 88.4
Glyma.19G004700 Glycine max HOM05D004010 ORTHO05D004995 2.5e-185 652.1 370 89.5
Lj2g0015656 Lotus japonicus HOM05D004010 ORTHO05D004995 1.8e-167 592.8 372 80.6
Ca_04154_v3 Cicer arietinum L. HOM05D004010 ORTHO05D004995 5.3e-167 591.3 372 79.3
TPR.G14085 Trifolium pratense HOM05D004010 ORTHO05D004995 9.0e-167 590.5 372 80.4
Psat1g055320 Pisum sativum HOM05D004010 ORTHO05D004995 1.7e-165 586.3 372 79.0
arahy.Tifrunner.gnm1.ann1.TK4K1F Arachis hypogaea HOM05D004010 ORTHO05D004995 1.9e-164 582.8 372 78.2
arahy.Tifrunner.gnm1.ann1.8M6LVM Arachis hypogaea HOM05D004010 ORTHO05D004995 3.6e-163 578.6 372 78.0
Lalb_Chr24g0397171 Lupinus albus HOM05D004010 ORTHO05D004995 6.7e-162 574.3 372 78.8
Medtr6g005010 Medicago truncatula HOM05D004010 ORTHO05D004995 1.3e-157 560.1 372 77.2
Cfa007379 Carpinus fangiana HOM05D004010 ORTHO05D004995 3.1e-135 485.7 372 66.1
QL02p075066 Quercus lobata HOM05D004010 ORTHO05D004995 2.1e-131 473.0 380 63.7
RcHm_v2.0_Chr2g0173001 Rosa chinensis HOM05D004010 ORTHO05D004995 1.0e-130 470.7 373 64.9
Prupe.3G290300 Prunus persica HOM05D004010 ORTHO05D004995 1.4e-130 470.3 371 65.0
FAN05G5546 Fragaria x ananassa HOM05D004010 ORTHO05D004995 3.4e-129 465.7 372 64.0
Duzib187G0443 Durio zibethinus HOM05D004010 ORTHO05D004995 9.8e-129 464.2 368 63.6
FAN14G1482 Fragaria x ananassa HOM05D004010 ORTHO05D004995 3.7e-128 462.2 372 63.4
Thecc.04G015900 Theobroma cacao HOM05D004010 ORTHO05D004995 1.8e-127 459.9 370 63.0
GSVIVG01032418001 Vitis vinifera HOM05D004010 ORTHO05D004995 1.8e-127 459.9 371 63.3
FvH4_6g51330 Fragaria vesca HOM05D004010 ORTHO05D004995 2.0e-126 456.4 372 63.2
Dinv33448 Davidia involucrata HOM05D004010 ORTHO05D004995 7.7e-126 454.5 373 62.2
MD09G1028200 Malus domestica HOM05D004010 ORTHO05D004995 2.9e-125 452.6 368 63.0
CANSAT64G1980 Cannabis sativa HOM05D004010 ORTHO05D004995 1.9e-124 449.9 372 61.0
Gohir.D09G028100 Gossypium hirsutum HOM05D004010 ORTHO05D004995 5.5e-124 448.4 368 61.1
Gorai.006G032700 Gossypium raimondii HOM05D004010 ORTHO05D004995 2.1e-123 446.4 368 61.1
Ciclev10014033m.g Citrus clementina HOM05D004010 ORTHO05D004995 2.8e-123 446.0 372 61.6
CiPaw.03G042500 Carya illinoinensis HOM05D004010 ORTHO05D004995 6.1e-123 444.9 371 62.3
FAN09G4321 Fragaria x ananassa HOM05D004010 ORTHO05D004995 3.0e-122 442.6 372 61.8
TAR371G0622 Trochodendron aralioides HOM05D004010 ORTHO05D004995 1.2e-121 440.7 371 60.6
MD17G1029800 Malus domestica HOM05D004010 ORTHO05D004995 2.6e-121 439.5 372 61.3
COL.COLO4_29097 Corchorus olitorius HOM05D004010 ORTHO05D004995 2.8e-120 436.0 368 60.1
CSS0029677 Camellia sinensis var. sinensis HOM05D004010 ORTHO05D004995 2.4e-119 433.0 373 59.5
Potri.001G346000 Populus trichocarpa HOM05D004010 ORTHO05D004995 3.8e-117 425.6 371 58.5
vmacro05856 Vaccinium macrocarpon HOM05D004010 ORTHO05D004995 1.5e-116 423.7 373 58.2
PSO478G2834 Papaver somniferum HOM05D004010 ORTHO05D004995 8.0e-115 417.9 372 55.4
Eucgr.I01751 Eucalyptus grandis HOM05D004010 ORTHO05D004995 1.4e-114 417.2 372 56.2
Manes.17G113000 Manihot esculenta HOM05D004010 ORTHO05D004995 1.4e-114 417.2 371 56.1
TWI36G0979 Tripterygium wilfordii HOM05D004010 ORTHO05D004995 4.0e-114 415.6 368 58.2
Aqoxy3G01154 Aquilegia oxysepala HOM05D004010 ORTHO05D004995 3.4e-113 412.5 371 55.3
PSO017G0470 Papaver somniferum HOM05D004010 ORTHO05D004995 1.3e-112 410.6 374 54.5
Sc03g0007550 Simmondsia chinensis HOM05D004010 ORTHO05D004995 1.1e-111 407.5 372 55.6
CsaV3_3G042730 Cucumis sativus L. HOM05D004010 ORTHO05D004995 9.2e-111 404.4 375 55.5
Lsat_1_v5_gn_4_183480 Lactuca sativa HOM05D004010 ORTHO05D004995 1.2e-110 404.1 377 54.1
Haze_14730 Corylus avellana HOM05D004010 ORTHO05D004995 1.6e-110 403.7 374 58.0
Nn4g22648 Nelumbo nucifera HOM05D004010 ORTHO05D004995 2.0e-110 403.3 367 55.9
ClCG10G013960 Citrullus lanatus HOM05D004010 ORTHO05D004995 4.6e-110 402.1 375 55.7
PGR142G3424 Punica granatum HOM05D004010 ORTHO05D004995 4.6e-110 402.1 371 54.2
Sed0022234 Sechium edule HOM05D004010 ORTHO05D004995 2.3e-109 399.8 375 54.7
CSS0006564 Camellia sinensis var. sinensis HOM05D004010 ORTHO05D004995 6.6e-109 398.3 331 60.7
HanXRQChr09g0255111 Helianthus annuus HOM05D004010 ORTHO05D004995 2.1e-107 393.3 377 53.8
MELO3C009985.2 Cucumis melo HOM05D004010 ORTHO05D004995 4.7e-107 392.1 380 53.7
Sp2g16800 Schrenkiella parvula HOM05D004010 ORTHO05D004995 1.4e-106 390.6 368 54.3
Solyc02g086500.3 Solanum lycopersicum HOM05D004010 ORTHO05D004995 4.4e-105 385.6 372 54.6
THA.LOC104825324 Tarenaya hassleriana HOM05D004010 ORTHO05D004995 7.5e-105 384.8 370 54.1
BcaC06g30965 Brassica carinata HOM05D004010 ORTHO05D004995 9.8e-105 384.4 371 53.9
Thhalv10003508m.g Eutrema salsugineum HOM05D004010 ORTHO05D004995 1.7e-104 383.6 371 53.6
CARHR149120 Cardamine hirsuta HOM05D004010 ORTHO05D004995 2.2e-104 383.3 371 53.9
Rhsim10G0018100 Rhododendron simsii HOM05D004010 ORTHO05D004995 2.2e-104 383.3 452 48.5
BcaC06g33789 Brassica carinata HOM05D004010 ORTHO05D004995 3.7e-104 382.5 371 53.1
C07p36860 Brassica napus HOM05D004010 ORTHO05D004995 3.7e-104 382.5 371 53.1
BolC7t44198H Brassica oleracea HOM05D004010 ORTHO05D004995 3.7e-104 382.5 371 53.1
A06p40990 Brassica napus HOM05D004010 ORTHO05D004995 6.4e-104 381.7 371 53.4
BraA06t27018Z Brassica rapa HOM05D004010 ORTHO05D004995 6.4e-104 381.7 371 53.4
Sopen02g031220 Solanum pennellii HOM05D004010 ORTHO05D004995 8.3e-104 381.3 372 53.8
Cpa.g.sc108.59 Carica papaya HOM05D004010 ORTHO05D004995 1.9e-103 380.2 345 55.9
ECA232G4079 Erigeron canadensis HOM05D004010 ORTHO05D004995 3.5e-102 375.9 373 51.7
AL5G17090 Arabidopsis lyrata HOM05D004010 ORTHO05D004995 7.8e-102 374.8 371 52.6
DCAR_001437 Daucus carota HOM05D004010 ORTHO05D004995 1.7e-101 373.6 371 52.6
Cc07_g01800 Coffea canephora HOM05D004010 ORTHO05D004995 5.0e-101 372.1 373 51.2
AT3G27670 Arabidopsis thaliana HOM05D004010 ORTHO05D004995 6.2e-99 365.2 371 51.2
Migut.H00083 Erythranthe guttata HOM05D004010 ORTHO05D004995 3.1e-98 362.8 385 48.3
Carub.0005s0611 Capsella rubella HOM05D004010 ORTHO05D004995 5.2e-98 362.1 371 51.2
Hund06717 Selenicereus undatus HOM05D004010 ORTHO05D004995 1.5e-97 360.5 367 50.7
Aa31LG2G5000 Aethionema arabicum HOM05D004010 ORTHO05D004995 5.4e-95 352.1 371 50.9
ATR1158G023 Amborella trichopoda HOM05D004010 ORTHO05D004995 2.5e-92 343.2 371 47.7
MBI10_g32033_MAGBIO Magnolia biondii HOM05D004010 ORTHO05D004995 2.8e-91 339.7 271 61.3
EL10Ac4g08587 Beta vulgaris HOM05D004010 ORTHO05D004995 2.0e-89 333.6 369 48.5
Sabra16G0225000 Salix brachista HOM05D004010 ORTHO05D004995 7.6e-89 331.6 507 41.6
Sabra16G0225700 Salix brachista HOM05D004010 ORTHO05D004995 4.3e-84 315.8 548 38.5
SalBow6G2090 Salvia bowleyana HOM05D004010 ORTHO05D004995 2.8e-83 313.2 458 40.4
Lju41A39G70 Lonicera japonica HOM05D004010 ORTHO05D004995 2.4e-82 310.1 401 46.9
CAN.G473.4 Capsicum annuum HOM05D004010 ORTHO05D004995 1.5e-81 307.4 250 61.6
Actinidia36110 Actinidia chinensis HOM05D004010 ORTHO05D004995 1.4e-79 300.8 376 46.8
Os01g0169500 Oryza sativa ssp. japonica HOM05D004010 ORTHO05D004995 1.4e-79 300.8 370 44.3
AUR62043055 Chenopodium quinoa HOM05D004010 ORTHO05D004995 1.3e-77 294.3 372 42.5
Zm00001eb123050 Zea mays HOM05D004010 ORTHO05D004995 7.3e-76 288.5 372 43.0
AUR62034752 Chenopodium quinoa HOM05D004010 ORTHO05D004995 7.6e-73 278.5 347 43.8
Nitab4.5_0006802g0030 Nicotiana tabacum HOM05D004010 ORTHO05D004995 1.1e-71 274.6 250 57.2
SGA_v2.0_scaffold135G34899 Striga asiatica HOM05D004010 ORTHO05D004995 4.3e-68 262.7 439 37.4
Atru.chr6.2370 Acer truncatum HOM05D004010 ORTHO05D004995 1.5e-57 227.6 147 73.5
FAN05G3555 Fragaria x ananassa HOM05D004010 ORTHO05D004995 3.8e-56 223.0 217 55.8
Mapoly0001s0420 Marchantia polymorpha HOM05D004010 ORTHO05D004995 1.4e-55 221.1 389 37.8
Gohir.A09G028500 Gossypium hirsutum HOM05D004010 ORTHO05D004995 2.3e-53 213.8 217 53.0
Oeu006813.1 Olea europaea HOM05D004010 ORTHO05D004995 7.4e-52 208.8 175 58.9
FAN05G1652 Fragaria x ananassa HOM05D004010 ORTHO05D004995 4.8e-51 206.1 216 52.3
Peaxi162Scf00129g01535 Petunia axillaris HOM05D004010 ORTHO05D004995 5.7e-44 182.6 395 37.0
CDE05G2835 Ceratophyllum demersum HOM05D004010 ORTHO05D004995 1.5e-41 174.5 243 39.5
FvH4_6g51542 Fragaria vesca HOM05D004010 ORTHO05D004995 8.5e-40 168.7 174 51.1
FAN02G4182 Fragaria x ananassa HOM05D004010 ORTHO05D004995 6.1e-38 162.5 175 50.9
SMO361G0448 Selaginella moellendorffii HOM05D004010 ORTHO05D004995 1.0e-37 161.8 252 34.5
PGSC0003DMG400012627 Solanum tuberosum HOM05D004010 ORTHO05D004995 2.3e-37 160.6 108 67.6
CDE05G1902 Ceratophyllum demersum HOM05D004010 ORTHO05D004995 1.3e-35 154.8 108 65.7
SEGI_19034 Sequoiadendron giganteum HOM05D004010 ORTHO05D004995 2.5e-31 140.6 250 34.0
CBR_g19447 Chara braunii HOM05D004010 ORTHO05D004995 2.7e-30 137.1 182 41.2
MBI10_g38112_MAGBIO Magnolia biondii HOM05D004010 ORTHO05D004995 2.9e-24 117.1 154 44.8
Atru.chr6.2369 Acer truncatum HOM05D004010 ORTHO05D004995 3.7e-19 100.1 127 44.9
SEGI_32252 Sequoiadendron giganteum HOM05D004010 ORTHO05D004995 1.4e-18 98.2 75 57.3
TPR.G14087 Trifolium pratense HOM05D004010 ORTHO05D004995 9.4e-15 85.5 52 80.8
FvH4_6g51560 Fragaria vesca HOM05D004010 ORTHO05D004995 2.2e-11 74.3 56 58.9
vmacro05455 Vaccinium macrocarpon HOM05D004010 ORTHO05D004995 6.3e-11 72.8 57 54.4
Actinidia15574 Actinidia chinensis HOM05D004010 ORTHO05D004995 6.6e-08 62.8 53 54.7
Hma1.2p1_1397F.1_g280710 Hydrangea macrophylla HOM05D004010 ORTHO05D036419 3.6e-06 57.0 61 44.3
Hma1.2p1_0078F.1_g040220 Hydrangea macrophylla HOM05D004010 ORTHO05D036419 6.1e-06 56.2 64 43.8
Hma1.2p1_2269F.1_g318480 Hydrangea macrophylla HOM05D004010 ORTHO05D036419 6.1e-06 56.2 61 44.3
Oeu006812.1 Olea europaea HOM05D004010 ORTHO05D004995 6.1e-06 56.2 60 46.7


User provided reference genes

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