Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G006900 Phaseolus vulgaris HOM05D005666 ORTHO05D007183 0.0e+00 1406.0 708 100.0
VMungo0464G0315 Vigna mungo HOM05D005666 ORTHO05D007183 0.0e+00 1291.6 708 91.8
Glyma.05G003600 Glycine max HOM05D005666 ORTHO05D007183 0.0e+00 1265.8 708 89.0
TPR.G14074 Trifolium pratense HOM05D005666 ORTHO05D007183 0.0e+00 1151.7 709 81.4
Glyma.19G004600 Glycine max HOM05D005666 ORTHO05D007183 0.0e+00 1139.8 642 88.2
Medtr8g094170 Medicago truncatula HOM05D005666 ORTHO05D007183 0.0e+00 1115.5 707 79.8
Ca_04159_v3 Cicer arietinum L. HOM05D005666 ORTHO05D007183 0.0e+00 1109.7 689 80.3
Lj2g0025454 Lotus japonicus HOM05D005666 ORTHO05D007183 0.0e+00 1097.4 695 80.4
Lalb_Chr12g0199101 Lupinus albus HOM05D005666 ORTHO05D007183 0.0e+00 1084.3 708 77.0
Lalb_Chr13g0300491 Lupinus albus HOM05D005666 ORTHO05D007183 1.2e-308 1062.8 708 75.1
arahy.Tifrunner.gnm1.ann1.XQUA9L Arachis hypogaea HOM05D005666 ORTHO05D007183 1.1e-303 1046.2 701 74.5
arahy.Tifrunner.gnm1.ann1.D3X7TW Arachis hypogaea HOM05D005666 ORTHO05D007183 6.5e-291 1003.8 683 73.9
QL02p074714 Quercus lobata HOM05D005666 ORTHO05D007183 3.1e-277 958.4 718 67.1
Psat1g054440 Pisum sativum HOM05D005666 ORTHO05D007183 2.2e-275 952.2 606 78.9
Gorai.012G064300 Gossypium raimondii HOM05D005666 ORTHO05D007183 9.1e-269 930.2 709 67.0
Gohir.D04G057600 Gossypium hirsutum HOM05D005666 ORTHO05D007183 1.3e-267 926.4 709 66.7
MD17G1027000 Malus domestica HOM05D005666 ORTHO05D007183 3.2e-266 921.8 708 65.4
CANSAT64G2468 Cannabis sativa HOM05D005666 ORTHO05D007183 1.0e-264 916.8 707 65.6
Duzib147G1248 Durio zibethinus HOM05D005666 ORTHO05D007183 1.3e-262 909.8 718 64.2
GSVIVG01032407001 Vitis vinifera HOM05D005666 ORTHO05D007183 1.4e-261 906.4 708 66.0
Atru.chr6.2394 Acer truncatum HOM05D005666 ORTHO05D007183 2.4e-261 905.6 708 64.8
MD09G1027000 Malus domestica HOM05D005666 ORTHO05D007183 1.6e-260 902.9 708 64.3
Thecc.04G017300 Theobroma cacao HOM05D005666 ORTHO05D007183 4.5e-260 901.4 710 64.4
Gohir.A05G355700 Gossypium hirsutum HOM05D005666 ORTHO05D007183 6.6e-259 897.5 689 66.8
Cpa.g.sc130.81 Carica papaya HOM05D005666 ORTHO05D007183 8.6e-259 897.1 714 63.6
Haze_10618 Corylus avellana HOM05D005666 ORTHO05D007183 4.2e-258 894.8 686 65.9
CsaV3_5G027130 Cucumis sativus L. HOM05D005666 ORTHO05D007183 1.2e-257 893.3 713 60.9
Potri.001G345200 Populus trichocarpa HOM05D005666 ORTHO05D007183 1.2e-257 893.3 719 62.7
RcHm_v2.0_Chr2g0172791 Rosa chinensis HOM05D005666 ORTHO05D007183 3.0e-256 888.6 738 62.2
Actinidia35772 Actinidia chinensis HOM05D005666 ORTHO05D007183 4.0e-256 888.3 714 63.2
MELO3C021580.2 Cucumis melo HOM05D005666 ORTHO05D007183 2.0e-255 885.9 714 60.5
Manes.17G112200 Manihot esculenta HOM05D005666 ORTHO05D007183 2.6e-255 885.6 708 63.7
COL.COLO4_29116 Corchorus olitorius HOM05D005666 ORTHO05D007183 4.4e-255 884.8 728 63.0
FAN14G3607 Fragaria x ananassa HOM05D005666 ORTHO05D007183 2.2e-254 882.5 738 61.7
CiPaw.03G043800 Carya illinoinensis HOM05D005666 ORTHO05D007183 2.9e-254 882.1 717 62.5
Hma1.2p1_0999F.1_g246210 Hydrangea macrophylla HOM05D005666 ORTHO05D007183 1.4e-253 879.8 706 62.5
TWI56G0621 Tripterygium wilfordii HOM05D005666 ORTHO05D007183 5.4e-253 877.9 719 62.9
FAN09G4801 Fragaria x ananassa HOM05D005666 ORTHO05D007183 1.2e-252 876.7 738 61.0
FAN02G4175 Fragaria x ananassa HOM05D005666 ORTHO05D007183 2.0e-252 875.9 747 60.5
Sabra16G0224200 Salix brachista HOM05D005666 ORTHO05D007183 2.0e-252 875.9 719 62.4
ClCG09G019260 Citrullus lanatus HOM05D005666 ORTHO05D007183 7.8e-252 874.0 714 60.9
FAN05G0542 Fragaria x ananassa HOM05D005666 ORTHO05D007183 2.9e-251 872.1 750 60.4
TAR371G0349 Trochodendron aralioides HOM05D005666 ORTHO05D007183 3.9e-251 871.7 714 61.8
vmacro18287 Vaccinium macrocarpon HOM05D005666 ORTHO05D007183 2.5e-250 869.0 712 62.6
Ciclev10014455m.g Citrus clementina HOM05D005666 ORTHO05D007183 8.0e-249 864.0 709 61.6
Prupe.3G291700 Prunus persica HOM05D005666 ORTHO05D007183 1.5e-247 859.8 652 65.6
Rhsim10G0213300 Rhododendron simsii HOM05D005666 ORTHO05D007183 2.0e-247 859.4 713 61.9
Sed0018750 Sechium edule HOM05D005666 ORTHO05D007183 4.9e-246 854.7 713 59.9
PGR083G1531 Punica granatum HOM05D005666 ORTHO05D007183 9.2e-245 850.5 705 60.9
Rhsim08G0049000 Rhododendron simsii HOM05D005666 ORTHO05D007183 8.9e-240 833.9 692 61.7
Eucgr.L01920 Eucalyptus grandis HOM05D005666 ORTHO05D007183 2.0e-239 832.8 711 58.9
Migut.K01395 Erythranthe guttata HOM05D005666 ORTHO05D007183 7.5e-239 830.9 708 59.3
Cc07_g01670 Coffea canephora HOM05D005666 ORTHO05D007183 4.1e-237 825.1 712 59.8
Sc03g0007440 Simmondsia chinensis HOM05D005666 ORTHO05D007183 2.3e-235 819.3 708 59.7
FvH4_6g51190 Fragaria vesca HOM05D005666 ORTHO05D007183 5.1e-235 818.1 683 60.6
CAN.G1057.3 Capsicum annuum HOM05D005666 ORTHO05D007183 1.9e-234 816.2 711 58.9
PGSC0003DMG400006959 Solanum tuberosum HOM05D005666 ORTHO05D007183 9.5e-234 813.9 711 59.6
AUR62026681 Chenopodium quinoa HOM05D005666 ORTHO05D007183 1.1e-232 810.4 714 58.8
Sopen02g016930 Solanum pennellii HOM05D005666 ORTHO05D007183 1.1e-232 810.4 718 58.5
Nitab4.5_0008365g0020 Nicotiana tabacum HOM05D005666 ORTHO05D007183 8.9e-232 807.4 718 59.5
SalBow7G2092 Salvia bowleyana HOM05D005666 ORTHO05D007183 1.3e-230 803.5 705 58.6
Ah.05g168070 Amaranthus hybridus HOM05D005666 ORTHO05D007183 6.4e-230 801.2 704 57.2
Nn3g16730 Nelumbo nucifera HOM05D005666 ORTHO05D007183 8.4e-230 800.8 701 59.2
CSS0006540 Camellia sinensis var. sinensis HOM05D005666 ORTHO05D007183 2.4e-229 799.3 652 62.1
SGA_v2.0_scaffold47G17503 Striga asiatica HOM05D005666 ORTHO05D007183 7.1e-229 797.7 709 58.4
Aqoxy3G01199 Aquilegia oxysepala HOM05D005666 ORTHO05D007183 1.3e-227 793.5 714 57.0
ECA246G2761 Erigeron canadensis HOM05D005666 ORTHO05D007183 1.1e-224 783.9 712 57.6
AL6G30550 Arabidopsis lyrata HOM05D005666 ORTHO05D007183 2.4e-224 782.7 709 58.0
AT5G19130 Arabidopsis thaliana HOM05D005666 ORTHO05D007183 1.5e-223 780.0 706 57.9
Thhalv10012831m.g Eutrema salsugineum HOM05D005666 ORTHO05D007183 4.4e-223 778.5 711 57.5
BolC9t58577H Brassica oleracea HOM05D005666 ORTHO05D007183 1.3e-222 776.9 706 58.2
DCAR_027499 Daucus carota HOM05D005666 ORTHO05D007183 2.9e-222 775.8 686 58.3
Sp6g25230 Schrenkiella parvula HOM05D005666 ORTHO05D007183 2.9e-222 775.8 709 57.7
C09p57110 Brassica napus HOM05D005666 ORTHO05D007183 8.4e-222 774.2 706 58.1
BraA10t44118Z Brassica rapa HOM05D005666 ORTHO05D007183 1.1e-221 773.9 706 58.1
PSO017G6377 Papaver somniferum HOM05D005666 ORTHO05D007183 1.9e-221 773.1 717 55.5
Hund22837 Selenicereus undatus HOM05D005666 ORTHO05D007183 1.9e-221 773.1 719 55.6
A10p20490 Brassica napus HOM05D005666 ORTHO05D007183 9.3e-221 770.8 706 57.5
BcaC04g18594 Brassica carinata HOM05D005666 ORTHO05D007183 1.2e-220 770.4 706 58.1
Carub.0006s1746 Capsella rubella HOM05D005666 ORTHO05D007183 2.7e-220 769.2 706 56.9
Nitab4.5_0002529g0030 Nicotiana tabacum HOM05D005666 ORTHO05D007183 4.6e-220 768.5 694 58.9
Aa31LG11G15280 Aethionema arabicum HOM05D005666 ORTHO05D007183 1.3e-219 766.9 704 56.0
BcaB08g36600 Brassica carinata HOM05D005666 ORTHO05D007183 3.0e-219 765.8 706 57.6
PSO478G0823 Papaver somniferum HOM05D005666 ORTHO05D007183 1.1e-218 763.8 717 55.0
Dinv33442 Davidia involucrata HOM05D005666 ORTHO05D007183 7.3e-218 761.1 663 59.9
HanXRQChr15g0475291 Helianthus annuus HOM05D005666 ORTHO05D007183 1.3e-217 760.4 707 56.9
Lju41A42G100 Lonicera japonica HOM05D005666 ORTHO05D007183 2.4e-216 756.1 616 61.5
Hma1.2p1_0999F.1_g246220 Hydrangea macrophylla HOM05D005666 ORTHO05D007183 9.0e-216 754.2 597 62.8
Solyc02g067820.4 Solanum lycopersicum HOM05D005666 ORTHO05D007183 2.2e-214 749.6 696 57.5
HanXRQChr17g0548481 Helianthus annuus HOM05D005666 ORTHO05D007183 1.6e-212 743.4 705 55.5
Lsat_1_v5_gn_0_47721 Lactuca sativa HOM05D005666 ORTHO05D007183 6.2e-209 731.5 684 57.2
MBI16_g31718_MAGBIO Magnolia biondii HOM05D005666 ORTHO05D007183 4.0e-208 728.8 709 55.1
EL10Ac1g01578 Beta vulgaris HOM05D005666 ORTHO05D007183 3.4e-207 725.7 732 53.3
Peaxi162Scf00080g00117 Petunia axillaris HOM05D005666 ORTHO05D007183 9.9e-207 724.2 705 55.0
FAN05G2905 Fragaria x ananassa HOM05D005666 ORTHO05D007183 3.3e-202 709.1 633 58.9
DCAR_011253 Daucus carota HOM05D005666 ORTHO05D007183 2.6e-199 699.5 784 49.1
THA.LOC104824726 Tarenaya hassleriana HOM05D005666 ORTHO05D007183 8.4e-198 694.5 703 53.1
Oeu048621.1 Olea europaea HOM05D005666 ORTHO05D007183 1.1e-197 694.1 644 57.8
unitig_747.g21863 Utricularia gibba HOM05D005666 ORTHO05D007183 7.9e-196 688.0 713 51.9
CSS0011984 Camellia sinensis var. sinensis HOM05D005666 ORTHO05D007183 1.8e-195 686.8 592 60.3
CDE05G2460 Ceratophyllum demersum HOM05D005666 ORTHO05D007183 3.9e-195 685.6 719 51.2
Zm00001eb156580 Zea mays HOM05D005666 ORTHO05D007183 6.5e-190 668.3 713 50.1
Eucgr.J02243 Eucalyptus grandis HOM05D005666 ORTHO05D007183 3.4e-175 619.4 521 60.7
HPP92_013793 Vanilla planifolia HOM05D005666 ORTHO05D007183 3.2e-173 612.8 694 48.8
ATR0686G164 Amborella trichopoda HOM05D005666 ORTHO05D007183 2.7e-172 609.8 616 51.3
CSS0008870 Camellia sinensis var. sinensis HOM05D005666 ORTHO05D007183 3.0e-155 553.1 421 67.5
Actinidia16943 Actinidia chinensis HOM05D005666 ORTHO05D007183 1.7e-150 537.3 636 49.7
vmacro06910 Vaccinium macrocarpon HOM05D005666 ORTHO05D007183 2.5e-149 533.5 521 57.0
CARHR193820 Cardamine hirsuta HOM05D005666 ORTHO05D007183 4.7e-148 529.3 501 55.7
BcaB05g23370 Brassica carinata HOM05D005666 ORTHO05D007183 1.6e-140 504.2 709 44.7
AUR62040590 Chenopodium quinoa HOM05D005666 ORTHO05D007183 7.3e-133 478.8 422 59.2
Mapoly0008s0195 Marchantia polymorpha HOM05D005666 ORTHO05D007183 1.8e-123 447.6 750 38.5
AagrBONN_evm.TU.Sc2ySwM_344.4982 Anthoceros agrestis HOM05D005666 ORTHO05D007183 6.0e-119 432.6 767 36.2
SMO134G0274 Selaginella moellendorffii HOM05D005666 ORTHO05D007183 4.0e-107 393.3 724 36.3
Pp3c22_6140 Physcomitrium patens HOM05D005666 ORTHO05D007183 3.0e-94 350.5 496 41.7
ATR0762G005 Amborella trichopoda HOM05D005666 ORTHO05D007183 5.5e-88 329.7 349 50.7
SEGI_39396 Sequoiadendron giganteum HOM05D005666 ORTHO05D007183 7.4e-85 319.3 338 50.3
THA.LOC109116951 Tarenaya hassleriana HOM05D005666 ORTHO05D007183 1.1e-80 305.4 297 56.9
SHI16418 Sapria himalayana HOM05D005666 ORTHO05D007183 2.8e-68 264.2 283 51.2
TPR.G20372 Trifolium pratense HOM05D005666 ORTHO05D007183 1.5e-66 258.5 165 77.0
ATR0919G001 Amborella trichopoda HOM05D005666 ORTHO05D007183 1.0e-65 255.8 254 53.9
SHI16416 Sapria himalayana HOM05D005666 ORTHO05D007183 6.3e-52 209.9 272 46.0
Os01g0682200 Oryza sativa ssp. japonica HOM05D005666 ORTHO05D007183 7.0e-51 206.5 254 44.9
CBR_g49194 Chara braunii HOM05D005666 ORTHO05D007183 8.0e-39 166.4 433 30.5
THA.LOC104820325 Tarenaya hassleriana HOM05D005666 ORTHO05D007183 2.1e-31 141.7 153 51.0
MCO10G117 Micromonas commoda HOM05D005666 ORTHO05D007183 3.4e-29 134.4 484 27.1
Oeu030978.1 Olea europaea HOM05D005666 ORTHO05D007183 4.5e-26 124.0 129 51.9
A02p05250 Brassica napus HOM05D005666 ORTHO05D007183 8.0e-23 113.2 299 29.1
CiPaw.04G028500 Carya illinoinensis HOM05D005666 ORTHO05D007183 9.2e-19 99.8 62 77.4
Oeu048620.1 Olea europaea HOM05D005666 ORTHO05D007183 6.0e-18 97.1 91 54.9
Thecc.05G064500 Theobroma cacao HOM05D005666 ORTHO05D007183 1.9e-11 75.5 87 42.5
BolC2t06938H Brassica oleracea HOM05D005666 ORTHO05D043081 9.2e-11 73.2 68 54.4
SEGI_03684 Sequoiadendron giganteum HOM05D005666 ORTHO05D007183 7.8e-10 70.1 79 49.4
FvH4_6g51172 Fragaria vesca HOM05D005666 ORTHO05D007183 4.3e-08 64.3 57 64.9
VMungo0464G0043 Vigna mungo HOM05D004954 ORTHO05D006267 2.3e-06 58.5 29 96.6


User provided reference genes

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