Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G004600 Phaseolus vulgaris HOM05D005478 ORTHO05D006426 5.5e-71 271.2 169 100.0
VMungo0464G1533 Vigna mungo HOM05D005478 ORTHO05D006426 7.0e-58 227.6 175 71.4
Glyma.19G002600 Glycine max HOM05D005478 ORTHO05D006426 4.8e-43 178.3 172 73.3
Glyma.05G002400 Glycine max HOM05D005478 ORTHO05D006426 8.6e-40 167.5 175 60.6
Lj2g0025845 Lotus japonicus HOM05D005478 ORTHO05D006426 1.5e-39 166.8 164 72.0
TPR.G31952 Trifolium pratense HOM05D005478 ORTHO05D006426 1.3e-35 153.7 169 53.8
Ca_04142_v3 Cicer arietinum L. HOM05D005478 ORTHO05D006426 2.2e-35 152.9 170 59.4
Medtr6g004420 Medicago truncatula HOM05D005478 ORTHO05D006426 8.3e-35 151.0 165 51.5
arahy.Tifrunner.gnm1.ann1.47572L Arachis hypogaea HOM05D005478 ORTHO05D006426 8.6e-32 141.0 178 55.6
Psat1g053440 Pisum sativum HOM05D005478 ORTHO05D006426 1.0e-29 134.0 173 50.3
TWI36G1604 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 3.1e-29 132.5 173 49.1
Lalb_Chr22g0360721 Lupinus albus HOM05D005478 ORTHO05D006426 1.5e-28 130.2 181 45.9
GSVIVG01032384001 Vitis vinifera HOM05D005478 ORTHO05D006426 2.6e-28 129.4 175 45.7
QL02p074001 Quercus lobata HOM05D005478 ORTHO05D006426 3.4e-28 129.0 170 45.3
Haze_14759 Corylus avellana HOM05D005478 ORTHO05D006426 5.8e-28 128.3 181 55.8
arahy.Tifrunner.gnm1.ann1.WAXE9D Arachis hypogaea HOM05D005478 ORTHO05D006426 7.5e-28 127.9 204 49.0
Ciclev10016916m.g Citrus clementina HOM05D005478 ORTHO05D006426 7.5e-28 127.9 172 51.2
Hma1.2p1_0818F.1_g223270 Hydrangea macrophylla HOM05D005478 ORTHO05D006426 9.8e-28 127.5 173 44.5
COL.COLO4_30424 Corchorus olitorius HOM05D005478 ORTHO05D006426 1.7e-27 126.7 181 42.0
CiPaw.04G029700 Carya illinoinensis HOM05D005478 ORTHO05D006426 2.2e-27 126.3 177 46.9
TAR629G3442 Trochodendron aralioides HOM05D005478 ORTHO05D006426 8.3e-27 124.4 168 53.0
Prupe.3G293900 Prunus persica HOM05D005478 ORTHO05D006426 1.4e-26 123.6 188 41.5
TWI56G0849 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 1.9e-26 123.2 173 43.4
Atru.chr6.2431 Acer truncatum HOM05D005478 ORTHO05D006426 2.4e-26 122.9 165 53.9
TWI12G0237 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 3.2e-26 122.5 177 42.4
Cpa.g.sc108.77 Carica papaya HOM05D005478 ORTHO05D006426 4.1e-26 122.1 183 41.0
Gorai.006G097900 Gossypium raimondii HOM05D005478 ORTHO05D006426 4.1e-26 122.1 174 53.4
Cfa007338 Carpinus fangiana HOM05D005478 ORTHO05D006426 5.4e-26 121.7 179 53.6
Gohir.D09G082100 Gossypium hirsutum HOM05D005478 ORTHO05D006426 1.6e-25 120.2 171 53.8
PGR142G0633 Punica granatum HOM05D005478 ORTHO05D006426 3.5e-25 119.0 183 44.8
Gohir.A09G082300 Gossypium hirsutum HOM05D005478 ORTHO05D006426 4.6e-25 118.6 172 53.5
Duzib235G1061 Durio zibethinus HOM05D005478 ORTHO05D006426 6.0e-25 118.2 176 43.8
TAR371G0105 Trochodendron aralioides HOM05D005478 ORTHO05D006426 6.0e-25 118.2 171 48.5
Nn3g16686 Nelumbo nucifera HOM05D005478 ORTHO05D006426 7.8e-25 117.9 164 59.1
CiPaw.03G045600 Carya illinoinensis HOM05D005478 ORTHO05D006426 2.3e-24 116.3 175 40.6
Oeu033728.1 Olea europaea HOM05D005478 ORTHO05D006426 3.9e-24 115.5 176 48.9
Sp2g16690 Schrenkiella parvula HOM05D005478 ORTHO05D006426 3.9e-24 115.5 186 38.2
Lalb_Chr24g0403571 Lupinus albus HOM05D005478 ORTHO05D006426 5.0e-24 115.2 174 55.2
BraA09t35982Z Brassica rapa HOM05D005478 ORTHO05D006426 6.6e-24 114.8 172 39.5
BcaC04g23900 Brassica carinata HOM05D005478 ORTHO05D006426 1.5e-23 113.6 172 41.9
C09p03650 Brassica napus HOM05D005478 ORTHO05D006426 1.5e-23 113.6 172 41.9
Duzib160G0719 Durio zibethinus HOM05D005478 ORTHO05D006426 1.9e-23 113.2 173 38.7
Thecc.06G091700 Theobroma cacao HOM05D005478 ORTHO05D006426 1.9e-23 113.2 176 41.5
ClCG10G013780 Citrullus lanatus HOM05D005478 ORTHO05D006426 2.5e-23 112.8 178 41.6
BolC9t53284H Brassica oleracea HOM05D005478 ORTHO05D006426 3.3e-23 112.5 172 41.9
Actinidia36124 Actinidia chinensis HOM05D005478 ORTHO05D006426 4.3e-23 112.1 179 39.7
CARHR148890 Cardamine hirsuta HOM05D005478 ORTHO05D006426 4.3e-23 112.1 178 39.9
Rhsim10G0014600 Rhododendron simsii HOM05D005478 ORTHO05D006426 4.3e-23 112.1 171 52.0
A09p03440 Brassica napus HOM05D005478 ORTHO05D006426 5.6e-23 111.7 172 39.0
CsaV3_3G042880 Cucumis sativus L. HOM05D005478 ORTHO05D006426 5.6e-23 111.7 180 40.0
MELO3C026588.2 Cucumis melo HOM05D005478 ORTHO05D006426 7.3e-23 111.3 180 41.7
CANSAT64G0255 Cannabis sativa HOM05D005478 ORTHO05D006426 1.2e-22 110.5 177 44.6
MSTRG.15534 Avicennia marina HOM05D005478 ORTHO05D006426 1.6e-22 110.2 173 43.4
unitig_88.g27693 Utricularia gibba HOM05D000631 ORTHO05D000524 2.1e-22 109.8 170 40.0
Sed0022021 Sechium edule HOM05D005478 ORTHO05D006426 3.6e-22 109.0 172 39.5
Duzib192G0894 Durio zibethinus HOM05D005478 ORTHO05D006426 4.7e-22 108.6 172 41.3
Migut.K01412 Erythranthe guttata HOM05D005478 ORTHO05D006426 8.0e-22 107.8 176 47.2
Thhalv10004961m.g Eutrema salsugineum HOM05D005478 ORTHO05D006426 8.0e-22 107.8 183 36.1
THA.LOC104825319 Tarenaya hassleriana HOM05D005478 ORTHO05D006426 8.0e-22 107.8 180 37.2
AL5G16940 Arabidopsis lyrata HOM05D005478 ORTHO05D006426 2.3e-21 106.3 189 36.0
Actinidia05981 Actinidia chinensis HOM05D005478 ORTHO05D006426 3.1e-21 105.9 164 43.9
FAN05G2721 Fragaria x ananassa HOM05D005478 ORTHO05D006426 5.2e-21 105.1 181 43.1
Potri.001G343200 Populus trichocarpa HOM05D005478 ORTHO05D006426 5.2e-21 105.1 117 46.2
Aa31LG2G5140 Aethionema arabicum HOM05D005478 ORTHO05D006426 1.2e-20 104.0 195 33.3
MSTRG.3284 Avicennia marina HOM05D005478 ORTHO05D006426 1.2e-20 104.0 174 40.8
BcaB04g19441 Brassica carinata HOM05D005478 ORTHO05D006426 1.5e-20 103.6 179 37.4
Carub.0005s0595 Capsella rubella HOM05D005478 ORTHO05D006426 1.5e-20 103.6 190 36.8
Eucgr.I01730 Eucalyptus grandis HOM05D005478 ORTHO05D006426 2.6e-20 102.8 184 50.0
Sabra16G0222600 Salix brachista HOM05D005478 ORTHO05D006426 3.4e-20 102.4 117 45.3
AT3G27520 Arabidopsis thaliana HOM05D005478 ORTHO05D006426 7.5e-20 101.3 192 35.4
FAN02G1690 Fragaria x ananassa HOM05D005478 ORTHO05D006426 7.5e-20 101.3 181 42.5
PSO478G1356 Papaver somniferum HOM05D005478 ORTHO05D006426 7.5e-20 101.3 182 37.9
Oeu048609.1 Olea europaea HOM05D005478 ORTHO05D006426 9.8e-20 100.9 176 52.8
Peaxi162Scf00700g00430 Petunia axillaris HOM05D005478 ORTHO05D006426 1.7e-19 100.1 166 39.8
Sc07g0003180 Simmondsia chinensis HOM05D005478 ORTHO05D006426 1.7e-19 100.1 169 38.5
Actinidia18441 Actinidia chinensis HOM05D005478 ORTHO05D006426 2.2e-19 99.8 180 38.3
C07p36630 Brassica napus HOM05D005478 ORTHO05D006426 2.9e-19 99.4 184 34.2
FAN14G4849 Fragaria x ananassa HOM05D005478 ORTHO05D006426 2.9e-19 99.4 182 42.3
FvH4_6g51790 Fragaria vesca HOM05D005478 ORTHO05D006426 3.7e-19 99.0 182 42.3
FAN09G1593 Fragaria x ananassa HOM05D005478 ORTHO05D006426 3.7e-19 99.0 182 42.3
BcaC06g30982 Brassica carinata HOM05D005478 ORTHO05D006426 4.9e-19 98.6 182 35.2
vmacro05877 Vaccinium macrocarpon HOM05D005478 ORTHO05D006426 4.9e-19 98.6 208 45.2
PSO017G4510 Papaver somniferum HOM05D005478 ORTHO05D006426 6.4e-19 98.2 181 37.6
DCAR_011260 Daucus carota HOM05D005478 ORTHO05D006426 8.3e-19 97.8 172 40.1
Thhalv10027961m.g Eutrema salsugineum HOM05D005478 ORTHO05D006426 8.3e-19 97.8 170 34.7
CSS0007505 Camellia sinensis var. sinensis HOM05D005478 ORTHO05D006426 1.4e-18 97.1 185 49.7
MBI14_g36718_MAGBIO Magnolia biondii HOM05D005478 ORTHO05D006426 1.4e-18 97.1 186 51.6
A06p41110 Brassica napus HOM05D005478 ORTHO05D006426 1.9e-18 96.7 185 34.6
BraA06t27034Z Brassica rapa HOM05D005478 ORTHO05D006426 1.9e-18 96.7 185 34.6
PGSC0003DMG400012636 Solanum tuberosum HOM05D005478 ORTHO05D006426 3.2e-18 95.9 165 37.0
AUR62041940 Chenopodium quinoa HOM05D005478 ORTHO05D006426 5.4e-18 95.1 180 33.9
ECA238G3024 Erigeron canadensis HOM05D005478 ORTHO05D006426 5.4e-18 95.1 168 47.6
MD09G1022900 Malus domestica HOM05D005478 ORTHO05D006426 5.4e-18 95.1 186 33.9
Lsat_1_v5_gn_0_18280 Lactuca sativa HOM05D005478 ORTHO05D006426 7.0e-18 94.7 167 40.7
BolC7t44179H Brassica oleracea HOM05D005478 ORTHO05D006426 9.2e-18 94.4 184 33.2
BcaC06g33809 Brassica carinata HOM05D005478 ORTHO05D006426 1.2e-17 94.0 184 33.2
AUR62028419 Chenopodium quinoa HOM05D005478 ORTHO05D006426 1.2e-17 94.0 180 33.9
Lsat_1_v5_gn_2_91160 Lactuca sativa HOM05D005478 ORTHO05D006426 1.2e-17 94.0 165 52.1
Solyc02g093450.3 Solanum lycopersicum HOM05D005478 ORTHO05D006426 1.2e-17 94.0 166 37.3
SGA_v2.0_scaffold30G12408 Striga asiatica HOM05D005478 ORTHO05D006426 1.2e-17 94.0 178 52.8
HPP92_006182 Vanilla planifolia HOM05D005478 ORTHO05D006426 1.2e-17 94.0 162 37.0
SGA_v2.0_scaffold47G17517 Striga asiatica HOM05D005478 ORTHO05D006426 1.6e-17 93.6 179 37.4
RcHm_v2.0_Chr2g0173291 Rosa chinensis HOM05D005478 ORTHO05D006426 2.1e-17 93.2 121 43.8
Sopen02g038220 Solanum pennellii HOM05D005478 ORTHO05D006426 2.1e-17 93.2 165 37.0
MD17G1022200 Malus domestica HOM05D005478 ORTHO05D006426 3.5e-17 92.4 185 41.1
HanXRQChr07g0199031 Helianthus annuus HOM05D005478 ORTHO05D006426 4.6e-17 92.0 177 44.6
THA.LOC104825211 Tarenaya hassleriana HOM05D005478 ORTHO05D006426 4.6e-17 92.0 130 43.8
ATR0824G160 Amborella trichopoda HOM05D005478 ORTHO05D006426 6.0e-17 91.7 166 34.3
vmacro18294 Vaccinium macrocarpon HOM05D005478 ORTHO05D006426 6.0e-17 91.7 211 43.6
Aqoxy5G03740 Aquilegia oxysepala HOM05D005478 ORTHO05D006426 7.8e-17 91.3 183 33.3
Hund15527 Selenicereus undatus HOM05D005478 ORTHO05D006426 7.8e-17 91.3 171 34.5
Manes.17G111100 Manihot esculenta HOM05D005478 ORTHO05D006426 1.0e-16 90.9 176 36.4
HanXRQChr14g0451171 Helianthus annuus HOM05D005478 ORTHO05D006426 3.0e-16 89.4 174 53.4
PSO063G0871 Papaver somniferum HOM05D005478 ORTHO05D006426 5.6e-15 85.1 155 35.5
CDE09G0806 Ceratophyllum demersum HOM05D005478 ORTHO05D006426 1.2e-14 84.0 175 29.1
PSO754G0087 Papaver somniferum HOM05D005478 ORTHO05D006426 4.7e-14 82.0 155 34.8
CDE02G4674 Ceratophyllum demersum HOM05D005478 ORTHO05D006426 8.1e-14 81.3 174 29.9
SEGI_00200 Sequoiadendron giganteum HOM05D005478 ORTHO05D006426 1.8e-13 80.1 172 33.7
Aqoxy1G02464 Aquilegia oxysepala HOM05D005478 ORTHO05D006426 1.3e-11 73.9 161 32.9
Dinv33426 Davidia involucrata HOM05D005478 ORTHO05D006426 1.7e-11 73.6 51 70.6
Cc07_g01510 Coffea canephora HOM05D005478 ORTHO05D006426 2.2e-11 73.2 70 55.7
Ah.02g128220 Amaranthus hybridus HOM05D005478 ORTHO05D006426 3.7e-11 72.4 174 32.8
Nn3g16214 Nelumbo nucifera HOM05D005478 ORTHO05D006426 6.4e-11 71.6 78 51.3
Nitab4.5_0000326g0190 Nicotiana tabacum HOM05D006502 ORTHO05D007704 4.6e-09 65.5 67 49.3
Gohir.D05G130900 Gossypium hirsutum HOM05D005478 ORTHO05D006426 1.3e-08 63.9 48 60.4
MBI10_g11211_MAGBIO Magnolia biondii HOM05D005478 ORTHO05D006426 5.6e-07 58.5 58 50.0
Os02g0595300 Oryza sativa ssp. japonica HOM05D005478 ORTHO05D006426 5.6e-07 58.5 172 39.5


User provided reference genes

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