Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G002100 Phaseolus vulgaris HOM05D004659 ORTHO05D005547 2.7e-129 465.3 234 100.0
VMungo0464G0639 Vigna mungo HOM05D004659 ORTHO05D005547 1.8e-120 436.0 234 91.9
Glyma.17G075900 Glycine max HOM05D004659 ORTHO05D005547 6.4e-102 374.4 231 81.4
arahy.Tifrunner.gnm1.ann1.23T474 Arachis hypogaea HOM05D004659 ORTHO05D005547 4.9e-94 348.2 234 75.2
Medtr4g131540 Medicago truncatula HOM05D004659 ORTHO05D005547 6.4e-94 347.8 228 77.2
Psat4g007600 Pisum sativum HOM05D004659 ORTHO05D005547 2.1e-92 342.8 229 76.4
Ca_21106_v3 Cicer arietinum L. HOM05D004659 ORTHO05D005547 1.7e-91 339.7 228 75.0
Lj4g0017760 Lotus japonicus HOM05D004659 ORTHO05D005547 7.8e-84 314.3 228 71.1
Lalb_Chr07g0179691 Lupinus albus HOM05D004659 ORTHO05D005547 1.0e-83 313.9 228 71.5
PGR031G1734 Punica granatum HOM05D004659 ORTHO05D005547 2.6e-79 299.3 230 67.0
Gorai.009G315800 Gossypium raimondii HOM05D004659 ORTHO05D005547 5.8e-79 298.1 218 67.9
Nitab4.5_0004104g0080 Nicotiana tabacum HOM05D004659 ORTHO05D005547 7.6e-79 297.7 222 66.2
PGSC0003DMG400032570 Solanum tuberosum HOM05D004659 ORTHO05D005547 7.6e-79 297.7 228 64.5
Gohir.D05G298600 Gossypium hirsutum HOM05D004659 ORTHO05D005547 9.9e-79 297.4 218 67.9
Gohir.A05G298900 Gossypium hirsutum HOM05D004659 ORTHO05D005547 1.7e-78 296.6 218 67.4
ClCG02G013790 Citrullus lanatus HOM05D004659 ORTHO05D005547 2.2e-78 296.2 230 65.2
Nitab4.5_0000691g0220 Nicotiana tabacum HOM05D004659 ORTHO05D005547 2.9e-78 295.8 204 70.6
Peaxi162Scf00195g00083 Petunia axillaris HOM05D004659 ORTHO05D005547 3.8e-78 295.4 208 69.2
Solyc04g009540.1 Solanum lycopersicum HOM05D004659 ORTHO05D005547 4.9e-78 295.0 228 64.5
Sopen04g004700 Solanum pennellii HOM05D004659 ORTHO05D005547 4.9e-78 295.0 228 64.5
CAN.G186.30 Capsicum annuum HOM05D004659 ORTHO05D005547 6.4e-78 294.7 220 66.4
CiPaw.02G177400 Carya illinoinensis HOM05D004659 ORTHO05D005547 5.4e-77 291.6 214 67.3
Oeu017240.1 Olea europaea HOM05D004659 ORTHO05D005547 7.1e-77 291.2 199 72.4
MSTRG.9197 Avicennia marina HOM05D004659 ORTHO05D005547 9.3e-77 290.8 225 66.7
CSS0038055 Camellia sinensis var. sinensis HOM05D004659 ORTHO05D005547 1.2e-76 290.4 205 68.8
Potri.010G215900 Populus trichocarpa HOM05D004659 ORTHO05D005547 1.2e-76 290.4 218 67.0
Hma1.2p1_2685F.1_g326920 Hydrangea macrophylla HOM05D004659 ORTHO05D005547 1.6e-76 290.0 225 65.3
CsaV3_5G006380 Cucumis sativus L. HOM05D004659 ORTHO05D005547 3.5e-76 288.9 230 63.9
MELO3C011720.2 Cucumis melo HOM05D004659 ORTHO05D005547 1.8e-75 286.6 230 63.5
Sabra10G0166900 Salix brachista HOM05D004659 ORTHO05D005547 1.8e-75 286.6 218 65.6
Potri.008G045800 Populus trichocarpa HOM05D004659 ORTHO05D005547 3.0e-75 285.8 220 65.5
AUR62027894 Chenopodium quinoa HOM05D004659 ORTHO05D005547 3.9e-75 285.4 232 64.2
Sabra08G0032100 Salix brachista HOM05D004659 ORTHO05D005547 3.9e-75 285.4 221 64.7
Prupe.8G222500 Prunus persica HOM05D004659 ORTHO05D005547 5.1e-75 285.0 231 63.6
AUR62036014 Chenopodium quinoa HOM05D004659 ORTHO05D005547 6.7e-75 284.6 186 72.6
THA.LOC104827313 Tarenaya hassleriana HOM05D004659 ORTHO05D005547 6.7e-75 284.6 194 70.6
Rhsim03G0135900 Rhododendron simsii HOM05D004659 ORTHO05D005547 8.7e-75 284.3 226 62.4
Lalb_Chr13g0301081 Lupinus albus HOM05D004659 ORTHO05D005547 1.5e-74 283.5 227 66.5
Atru.chr12.612 Acer truncatum HOM05D004659 ORTHO05D005547 1.9e-74 283.1 199 68.8
THA.LOC104799364 Tarenaya hassleriana HOM05D004659 ORTHO05D005547 3.3e-74 282.3 181 72.4
Sed0009994 Sechium edule HOM05D004659 ORTHO05D005547 7.4e-74 281.2 223 63.2
unitig_46.g18586 Utricularia gibba HOM05D004659 ORTHO05D005547 7.4e-74 281.2 232 61.2
CARHR199930 Cardamine hirsuta HOM05D004659 ORTHO05D005547 9.6e-74 280.8 183 71.6
SalBow4G3080 Salvia bowleyana HOM05D004659 ORTHO05D005547 1.6e-73 280.0 217 64.5
Sc09g0006840 Simmondsia chinensis HOM05D004659 ORTHO05D005547 2.8e-73 279.3 192 72.9
MD10G1183400 Malus domestica HOM05D004659 ORTHO05D005547 3.6e-73 278.9 209 67.5
AL6G24130 Arabidopsis lyrata HOM05D004659 ORTHO05D005547 4.8e-73 278.5 183 71.0
Ah.10g033100 Amaranthus hybridus HOM05D004659 ORTHO05D005547 8.1e-73 277.7 202 68.3
SGA_v2.0_scaffold62G21448 Striga asiatica HOM05D004659 ORTHO05D005547 8.1e-73 277.7 230 62.2
AT5G13510 Arabidopsis thaliana HOM05D004659 ORTHO05D005547 1.1e-72 277.3 183 71.0
Aa31sc127G30 Aethionema arabicum HOM05D004659 ORTHO05D005547 1.4e-72 276.9 181 70.2
Lj1P926T21 Lonicera japonica HOM05D004659 ORTHO05D005547 1.4e-72 276.9 225 62.2
MD05G1196100 Malus domestica HOM05D004659 ORTHO05D005547 1.8e-72 276.6 233 60.9
Aqoxy4G03156 Aquilegia oxysepala HOM05D004659 ORTHO05D005547 3.1e-72 275.8 200 67.0
TWI38G0010 Tripterygium wilfordii HOM05D004659 ORTHO05D005547 3.1e-72 275.8 188 70.2
Nn2g10610 Nelumbo nucifera HOM05D004659 ORTHO05D005547 6.9e-72 274.6 182 72.5
Cpa.g.sc1.279 Carica papaya HOM05D004659 ORTHO05D005547 1.5e-71 273.5 227 60.4
Manes.07G069200 Manihot esculenta HOM05D004659 ORTHO05D005547 2.0e-71 273.1 202 66.3
PSO339G6228 Papaver somniferum HOM05D004659 ORTHO05D005547 2.6e-71 272.7 185 71.9
PSO384G3929 Papaver somniferum HOM05D004659 ORTHO05D005547 2.6e-71 272.7 185 71.9
vmacro04881 Vaccinium macrocarpon HOM05D004659 ORTHO05D005547 3.4e-71 272.3 232 60.3
Nn8g38769 Nelumbo nucifera HOM05D004659 ORTHO05D005547 4.5e-71 271.9 218 63.8
CANSAT35G1484 Cannabis sativa HOM05D004659 ORTHO05D005547 5.8e-71 271.6 225 61.3
BcaC04g19111 Brassica carinata HOM05D004659 ORTHO05D005547 7.6e-71 271.2 183 68.3
BolC9t59202H Brassica oleracea HOM05D004659 ORTHO05D005547 7.6e-71 271.2 183 68.3
TAR369G1054 Trochodendron aralioides HOM05D004659 ORTHO05D005547 1.3e-70 270.4 225 62.2
Cfa013817 Carpinus fangiana HOM05D004659 ORTHO05D005547 1.7e-70 270.0 223 61.9
BolC2t06562H Brassica oleracea HOM05D004659 ORTHO05D005547 3.8e-70 268.9 188 68.6
HanXRQChr09g0247171 Helianthus annuus HOM05D004659 ORTHO05D005547 4.9e-70 268.5 202 65.3
BraA02t05172Z Brassica rapa HOM05D004659 ORTHO05D005547 6.4e-70 268.1 188 68.1
FvH4_2g21340 Fragaria vesca HOM05D004659 ORTHO05D005547 1.1e-69 267.3 205 66.3
Sp6g30510 Schrenkiella parvula HOM05D004659 ORTHO05D005547 1.1e-69 267.3 183 68.9
Thecc.10G065300 Theobroma cacao HOM05D004659 ORTHO05D005547 1.1e-69 267.3 225 61.3
Actinidia03015 Actinidia chinensis HOM05D004659 ORTHO05D005547 1.4e-69 266.9 176 71.6
BcaNung01889 Brassica carinata HOM05D004659 ORTHO05D005547 1.4e-69 266.9 188 67.6
Lsat_1_v5_gn_9_66541 Lactuca sativa HOM05D004659 ORTHO05D005547 1.4e-69 266.9 232 58.2
A10p24760 Brassica napus HOM05D004659 ORTHO05D005547 1.9e-69 266.5 183 68.3
BraA10t44539Z Brassica rapa HOM05D004659 ORTHO05D005547 1.9e-69 266.5 183 68.3
Haze_22491 Corylus avellana HOM05D004659 ORTHO05D005547 1.9e-69 266.5 223 61.9
C02p06210 Brassica napus HOM05D004659 ORTHO05D005547 2.4e-69 266.2 183 68.3
Thhalv10014625m.g Eutrema salsugineum HOM05D004659 ORTHO05D005547 2.4e-69 266.2 183 69.4
RcHm_v2.0_Chr6g0287931 Rosa chinensis HOM05D004659 ORTHO05D005547 2.4e-69 266.2 215 63.7
Carub.0006s1167 Capsella rubella HOM05D004659 ORTHO05D005547 7.1e-69 264.6 183 68.9
BcaNung01147 Brassica carinata HOM05D004659 ORTHO05D005547 1.6e-68 263.5 183 68.3
C09p63590 Brassica napus HOM05D004659 ORTHO05D005547 1.6e-68 263.5 183 67.8
Duzib106G0066 Durio zibethinus HOM05D004659 ORTHO05D005547 1.6e-68 263.5 185 69.7
COL.COLO4_23776 Corchorus olitorius HOM05D004659 ORTHO05D005547 3.5e-68 262.3 224 61.6
CDE02G4355 Ceratophyllum demersum HOM05D002697 ORTHO05D005547 6.0e-68 261.5 181 69.6
MBI05_g34749_MAGBIO Magnolia biondii HOM05D004659 ORTHO05D005547 7.9e-68 261.2 220 60.5
CDE09G1094 Ceratophyllum demersum HOM05D004659 ORTHO05D005547 3.0e-67 259.2 182 69.2
Cc09_g02380 Coffea canephora HOM05D004659 ORTHO05D005547 3.0e-67 259.2 188 66.5
ECA232G1287 Erigeron canadensis HOM05D004659 ORTHO05D005547 1.5e-66 256.9 181 67.4
FAN24G1009 Fragaria x ananassa HOM05D004659 ORTHO05D005547 1.5e-66 256.9 185 68.1
Ciclev10032705m.g Citrus clementina HOM05D004659 ORTHO05D005547 3.3e-66 255.8 200 63.5
DCAR_019149 Daucus carota HOM05D004659 ORTHO05D005547 3.3e-66 255.8 200 65.5
QL08p057255 Quercus lobata HOM05D004659 ORTHO05D005547 7.4e-66 254.6 228 56.6
ATR0594G228 Amborella trichopoda HOM05D004659 ORTHO05D005547 6.9e-64 248.1 179 65.9
Mapoly0115s0051 Marchantia polymorpha HOM05D004659 ORTHO05D005547 3.4e-63 245.7 184 65.2
SMO239G0117 Selaginella moellendorffii HOM05D004659 ORTHO05D005547 4.9e-62 241.9 178 65.2
Zm00001eb013020 Zea mays HOM05D004659 ORTHO05D005547 1.1e-61 240.7 195 59.5
TPR.G37110 Trifolium pratense HOM05D004659 ORTHO05D005547 1.9e-61 240.0 226 57.5
Zm00001eb397230 Zea mays HOM05D004659 ORTHO05D005547 2.5e-61 239.6 224 55.4
Os03g0284400 Oryza sativa ssp. japonica HOM05D004659 ORTHO05D005547 3.5e-60 235.7 209 57.4
AagrBONN_evm.TU.Sc2ySwM_228.2422 Anthoceros agrestis HOM05D004659 ORTHO05D005547 7.4e-58 228.0 177 60.5
Pp3c2_35950 Physcomitrium patens HOM05D004659 ORTHO05D005547 9.6e-58 227.6 179 59.8
Pp3c1_1330 Physcomitrium patens HOM05D004659 ORTHO05D005547 6.3e-57 224.9 189 56.6
SMO001G0016 Selaginella moellendorffii HOM05D004659 ORTHO05D005547 1.7e-54 216.9 145 69.7
Dinv31375 Davidia involucrata HOM05D004659 ORTHO05D005547 1.9e-53 213.4 169 65.1
C01p52890 Brassica napus HOM05D004659 ORTHO05D005547 1.1e-45 187.6 144 61.1
BolC1t05226H Brassica oleracea HOM05D004659 ORTHO05D005547 1.1e-45 187.6 144 61.1
Thhalv10022434m.g Eutrema salsugineum HOM05D004659 ORTHO05D005547 1.4e-45 187.2 144 61.1
AT3G12370 Arabidopsis thaliana HOM05D004659 ORTHO05D005547 7.2e-45 184.9 143 60.8
BcaC09g48234 Brassica carinata HOM05D004659 ORTHO05D005547 9.4e-45 184.5 144 60.4
Sp3g10560 Schrenkiella parvula HOM05D004659 ORTHO05D005547 9.4e-45 184.5 143 60.1
AL3G24020 Arabidopsis lyrata HOM05D004659 ORTHO05D005547 1.2e-44 184.1 143 60.1
Aa31sc153G80 Aethionema arabicum HOM05D004659 ORTHO05D005547 2.1e-44 183.3 145 59.3
BcaC05g29267 Brassica carinata HOM05D004659 ORTHO05D005547 2.1e-44 183.3 144 59.7
C05p55460 Brassica napus HOM05D004659 ORTHO05D005547 2.1e-44 183.3 144 59.7
BolC5t34212H Brassica oleracea HOM05D004659 ORTHO05D005547 2.1e-44 183.3 144 59.7
CARHR086910 Cardamine hirsuta HOM05D004659 ORTHO05D005547 2.7e-44 183.0 143 60.8
A05p37030 Brassica napus HOM05D004659 ORTHO05D005547 6.1e-44 181.8 144 59.0
BraA05t22500Z Brassica rapa HOM05D004659 ORTHO05D005547 6.1e-44 181.8 144 59.0
Carub.0003s1173 Capsella rubella HOM05D004659 ORTHO05D005547 6.1e-44 181.8 146 58.9
Zm00001eb355270 Zea mays HOM05D004659 ORTHO05D005547 5.7e-42 175.3 146 54.1
CBR_g32465 Chara braunii HOM05D004659 ORTHO05D005547 1.3e-41 174.1 186 46.2
Glyma.13G155300 Glycine max HOM05D004659 ORTHO05D005547 1.2e-39 167.5 108 77.8
Haze_16952 Corylus avellana HOM05D004659 ORTHO05D005547 2.0e-39 166.8 222 45.9
Os05g0121500 Oryza sativa ssp. japonica HOM05D004659 ORTHO05D005547 4.5e-39 165.6 162 48.8
SMO306G0014 Selaginella moellendorffii HOM05D004659 ORTHO05D005547 6.1e-36 155.2 102 71.6
HPP92_012064 Vanilla planifolia HOM05D004659 ORTHO05D005547 3.0e-35 152.9 173 45.7
A02p02000 Brassica napus HOM05D004659 ORTHO05D005547 4.8e-33 145.6 103 66.0
Hund23274 Selenicereus undatus HOM05D004659 ORTHO05D005547 2.1e-28 130.2 160 42.5
Sc01g0005590 Simmondsia chinensis HOM05D004659 ORTHO05D005547 1.4e-27 127.5 155 43.9
BcaB01g05353 Brassica carinata HOM05D004659 ORTHO05D005547 4.4e-26 122.5 134 48.5
Sc26g0002120 Simmondsia chinensis HOM05D004659 ORTHO05D005547 7.5e-26 121.7 170 39.4
MD17G1117700 Malus domestica HOM05D004659 ORTHO05D005547 1.1e-24 117.9 86 65.1
PRCOL_00005567 Prasinoderma coloniale HOM05D004659 ORTHO05D005547 5.3e-24 115.5 166 37.3
Rhsim07G0202500 Rhododendron simsii HOM05D004659 ORTHO05D005547 6.5e-22 108.6 127 49.6
Sc01g0009170 Simmondsia chinensis HOM05D004659 ORTHO05D005547 2.5e-21 106.7 135 44.4
Cfa001576 Carpinus fangiana HOM05D004659 ORTHO05D005547 9.4e-21 104.8 223 35.0
Ah.09g233850 Amaranthus hybridus HOM05D004659 ORTHO05D005547 2.7e-20 103.2 150 37.3
MBI05_g35481_MAGBIO Magnolia biondii HOM05D004659 ORTHO05D005547 6.1e-20 102.1 99 56.6
Cre06.g272850 Chlamydomonas reinhardtii HOM05D004659 ORTHO05D005547 1.4e-19 100.9 183 33.3
Zm00001eb342870 Zea mays HOM05D004659 ORTHO05D005547 6.8e-19 98.6 71 62.0
EL10Ac6g15306 Beta vulgaris HOM05D004659 ORTHO05D005547 1.5e-18 97.4 155 34.2
Pp3c11_2850 Physcomitrium patens HOM05D004659 ORTHO05D005547 2.8e-17 93.2 68 66.2
GSVIVG01032650001 Vitis vinifera HOM05D004659 ORTHO05D005547 1.1e-16 91.3 223 34.1
Actinidia38237 Actinidia chinensis HOM05D004659 ORTHO05D005547 1.5e-13 80.9 96 49.0
Medtr3g058560 Medicago truncatula HOM05D004659 ORTHO05D005547 1.5e-13 80.9 49 77.6
AUR62043493 Chenopodium quinoa HOM05D004659 ORTHO05D005547 1.6e-12 77.4 113 38.1
AUR62003563 Chenopodium quinoa HOM05D004659 ORTHO05D005547 1.0e-06 58.2 84 38.1
AUR62017877 Chenopodium quinoa HOM05D004659 ORTHO05D005547 1.0e-06 58.2 84 38.1


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