Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G296700 Phaseolus vulgaris HOM05D006500 ORTHO05D008028 1.5e-89 332.8 165 100.0
VMungo0251G2572 Vigna mungo HOM05D006500 ORTHO05D008028 1.0e-77 293.5 163 91.4
Glyma.07G207800 Glycine max HOM05D006500 ORTHO05D008028 6.1e-75 284.3 165 85.5
Glyma.02G137600 Glycine max HOM05D006500 ORTHO05D008028 4.0e-74 281.6 165 86.1
Lj4g0023361 Lotus japonicus HOM05D006500 ORTHO05D008028 4.1e-71 271.6 165 82.4
Psat7g120240 Pisum sativum HOM05D006500 ORTHO05D008028 7.0e-71 270.8 160 83.8
Medtr4g087310 Medicago truncatula HOM05D006500 ORTHO05D008028 2.9e-69 265.4 148 86.5
Lalb_Chr09g0328101 Lupinus albus HOM05D006500 ORTHO05D008028 2.8e-67 258.8 163 80.4
Ca_18638_v3 Cicer arietinum L. HOM05D006500 ORTHO05D008028 1.0e-66 256.9 164 79.3
Cpa.g.sc9.364 Carica papaya HOM05D006500 ORTHO05D008028 1.4e-66 256.5 156 79.5
QL10p055774 Quercus lobata HOM05D006500 ORTHO05D008028 3.0e-66 255.4 151 82.1
arahy.Tifrunner.gnm1.ann1.A3K5YX Arachis hypogaea HOM05D006500 ORTHO05D008028 8.9e-66 253.8 167 73.7
arahy.Tifrunner.gnm1.ann1.SHKR8E Arachis hypogaea HOM05D006500 ORTHO05D008028 8.9e-66 253.8 167 73.7
ClCG06G001100 Citrullus lanatus HOM05D006500 ORTHO05D008028 1.5e-65 253.1 147 81.6
Sed0015541 Sechium edule HOM05D006500 ORTHO05D008028 9.8e-65 250.4 145 82.1
vmacro00698 Vaccinium macrocarpon HOM05D006500 ORTHO05D008028 1.3e-64 250.0 147 78.2
GSVIVG01038143001 Vitis vinifera HOM05D006500 ORTHO05D008028 1.7e-64 249.6 147 82.3
COL.COLO4_08138 Corchorus olitorius HOM05D006500 ORTHO05D008028 2.2e-64 249.2 152 80.3
Eucgr.A00110 Eucalyptus grandis HOM05D006500 ORTHO05D008028 2.2e-64 249.2 152 77.0
Eucgr.A00287 Eucalyptus grandis HOM05D006500 ORTHO05D008028 2.2e-64 249.2 152 77.0
Gohir.A05G327700 Gossypium hirsutum HOM05D006500 ORTHO05D008028 2.2e-64 249.2 153 77.8
CiPaw.02G100400 Carya illinoinensis HOM05D006500 ORTHO05D008028 3.7e-64 248.4 155 77.4
Gohir.D05G327900 Gossypium hirsutum HOM05D006500 ORTHO05D008028 3.7e-64 248.4 153 77.8
Gorai.009G351800 Gossypium raimondii HOM05D006500 ORTHO05D008028 3.7e-64 248.4 153 77.8
Aqoxy2G00124 Aquilegia oxysepala HOM05D006500 ORTHO05D008028 4.9e-64 248.1 151 78.1
RcHm_v2.0_Chr4g0405941 Rosa chinensis HOM05D006500 ORTHO05D008028 6.4e-64 247.7 154 76.6
Sed0014008 Sechium edule HOM05D006500 ORTHO05D008028 6.4e-64 247.7 148 79.1
Actinidia27113 Actinidia chinensis HOM05D006500 ORTHO05D008028 1.1e-63 246.9 149 77.2
Rhsim09G0010200 Rhododendron simsii HOM05D006500 ORTHO05D008028 1.1e-63 246.9 147 78.9
MELO3C022425.2 Cucumis melo HOM05D006500 ORTHO05D008028 1.4e-63 246.5 145 80.0
Solyc06g053430.4 Solanum lycopersicum HOM05D006500 ORTHO05D008028 1.4e-63 246.5 146 80.8
Sopen06g018490 Solanum pennellii HOM05D006500 ORTHO05D008028 1.4e-63 246.5 146 80.8
PGSC0003DMG400016334 Solanum tuberosum HOM05D006500 ORTHO05D008028 1.4e-63 246.5 146 80.8
TWI38G1400 Tripterygium wilfordii HOM05D006500 ORTHO05D008028 1.4e-63 246.5 146 78.8
FAN17G0772 Fragaria x ananassa HOM05D006500 ORTHO05D008028 2.4e-63 245.7 155 77.4
Potri.019G112100 Populus trichocarpa HOM05D006500 ORTHO05D008028 2.4e-63 245.7 146 80.1
SalBow3G2241 Salvia bowleyana HOM05D006500 ORTHO05D008028 2.4e-63 245.7 154 75.3
Manes.11G129200 Manihot esculenta HOM05D006500 ORTHO05D008028 3.2e-63 245.4 148 79.7
Thecc.04G165600 Theobroma cacao HOM05D006500 ORTHO05D008028 4.1e-63 245.0 131 86.3
FvH4_4g10450 Fragaria vesca HOM05D006500 ORTHO05D008028 5.4e-63 244.6 155 77.4
MD04G1049100 Malus domestica HOM05D006500 ORTHO05D008028 5.4e-63 244.6 147 78.2
FAN12G2511 Fragaria x ananassa HOM05D006500 ORTHO05D008028 7.0e-63 244.2 156 77.6
Prupe.1G207200 Prunus persica HOM05D006500 ORTHO05D008028 7.0e-63 244.2 158 75.3
CsaV3_6G007030 Cucumis sativus L. HOM05D006500 ORTHO05D008028 9.2e-63 243.8 145 79.3
Duzib268G0518 Durio zibethinus HOM05D006500 ORTHO05D008028 9.2e-63 243.8 133 85.7
Hma1.2p1_0108F.1_g051720 Hydrangea macrophylla HOM05D006500 ORTHO05D008028 9.2e-63 243.8 153 76.5
MSTRG.4301 Avicennia marina HOM05D006500 ORTHO05D008028 1.6e-62 243.0 154 75.3
Duzib151G0460 Durio zibethinus HOM05D006500 ORTHO05D008028 1.6e-62 243.0 138 84.1
MD17G1177800 Malus domestica HOM05D006500 ORTHO05D008028 1.6e-62 243.0 146 78.1
CANSAT56G1821 Cannabis sativa HOM05D006500 ORTHO05D008028 2.0e-62 242.7 153 77.1
CAN.G136.13 Capsicum annuum HOM05D006500 ORTHO05D008028 2.0e-62 242.7 146 79.5
CiPaw.01G170700 Carya illinoinensis HOM05D006500 ORTHO05D008028 2.0e-62 242.7 157 75.2
Potri.013G126900 Populus trichocarpa HOM05D006500 ORTHO05D008028 2.0e-62 242.7 154 76.0
Dinv33205 Davidia involucrata HOM05D006500 ORTHO05D008028 2.7e-62 242.3 143 81.1
Sabra19G0108100 Salix brachista HOM05D006500 ORTHO05D008028 2.7e-62 242.3 148 79.1
TAR365G1104 Trochodendron aralioides HOM05D006500 ORTHO05D008028 3.5e-62 241.9 149 78.5
CSS0014789 Camellia sinensis var. sinensis HOM05D006500 ORTHO05D008028 7.8e-62 240.7 151 74.2
Nn1g09644 Nelumbo nucifera HOM05D006500 ORTHO05D008028 1.7e-61 239.6 149 76.5
Peaxi162Scf00180g00116 Petunia axillaris HOM05D006500 ORTHO05D008028 3.0e-61 238.8 145 78.6
SGA_v2.0_scaffold283G46959 Striga asiatica HOM05D006500 ORTHO05D008028 3.0e-61 238.8 145 77.2
AL1G15630 Arabidopsis lyrata HOM05D006500 ORTHO05D008028 3.9e-61 238.4 151 72.2
Oeu050336.1 Olea europaea HOM05D006500 ORTHO05D008028 3.9e-61 238.4 150 75.3
Carub.0001s0507 Capsella rubella HOM05D006500 ORTHO05D008028 5.0e-61 238.0 153 71.9
Thhalv10008926m.g Eutrema salsugineum HOM05D006500 ORTHO05D008028 5.0e-61 238.0 146 74.7
EL10Ac3g06088 Beta vulgaris HOM05D006500 ORTHO05D008028 6.6e-61 237.7 153 75.2
DCAR_023930 Daucus carota HOM05D006500 ORTHO05D008028 8.6e-61 237.3 150 75.3
CARHR005240 Cardamine hirsuta HOM05D006500 ORTHO05D008028 1.1e-60 236.9 152 71.1
Atru.chr4.1419 Acer truncatum HOM05D006500 ORTHO05D008028 1.9e-60 236.1 150 75.3
Nitab4.5_0001586g0010 Nicotiana tabacum HOM05D006500 ORTHO05D008028 1.9e-60 236.1 144 77.8
Hund03202 Selenicereus undatus HOM05D006500 ORTHO05D008028 1.9e-60 236.1 151 72.8
PSO732G0103 Papaver somniferum HOM05D006500 ORTHO05D008028 3.3e-60 235.3 148 74.3
AUR62023794 Chenopodium quinoa HOM05D006500 ORTHO05D008028 4.3e-60 235.0 151 72.8
BcaC07g42119 Brassica carinata HOM05D006500 ORTHO05D008028 5.6e-60 234.6 146 71.9
HanXRQChr14g0433631 Helianthus annuus HOM05D003327 ORTHO05D004535 5.6e-60 234.6 145 77.2
Sp1g04540 Schrenkiella parvula HOM05D006500 ORTHO05D008028 5.6e-60 234.6 146 72.6
AUR62002395 Chenopodium quinoa HOM05D006500 ORTHO05D008028 7.3e-60 234.2 156 73.1
Ciclev10022516m.g Citrus clementina HOM05D006500 ORTHO05D008028 9.5e-60 233.8 162 70.4
Oeu015723.1 Olea europaea HOM05D006500 ORTHO05D008028 9.5e-60 233.8 131 80.2
THA.LOC104800923 Tarenaya hassleriana HOM05D006500 ORTHO05D008028 9.5e-60 233.8 134 79.9
Cc03_g14120 Coffea canephora HOM05D006500 ORTHO05D008028 1.2e-59 233.4 156 71.2
PSO675G9108 Papaver somniferum HOM05D006500 ORTHO05D008028 1.6e-59 233.0 148 73.0
AT1G05720 Arabidopsis thaliana HOM05D006500 ORTHO05D008028 2.1e-59 232.6 150 70.7
Migut.G01179 Erythranthe guttata HOM05D006500 ORTHO05D008028 3.6e-59 231.9 155 71.0
PGR083G1262 Punica granatum HOM05D006500 ORTHO05D008028 3.6e-59 231.9 154 75.3
Sc25g0002800 Simmondsia chinensis HOM05D006500 ORTHO05D008028 3.6e-59 231.9 149 71.8
BcaC07g42115 Brassica carinata HOM05D006500 ORTHO05D008028 4.7e-59 231.5 146 71.9
BcaC07g42118 Brassica carinata HOM05D006500 ORTHO05D008028 4.7e-59 231.5 146 71.9
A09p67320 Brassica napus HOM05D006500 ORTHO05D008028 4.7e-59 231.5 146 71.9
C08p51630 Brassica napus HOM05D006500 ORTHO05D008028 4.7e-59 231.5 146 71.9
BolC8t52691H Brassica oleracea HOM05D006500 ORTHO05D008028 4.7e-59 231.5 146 71.9
Nitab4.5_0002544g0040 Nicotiana tabacum HOM05D006500 ORTHO05D008028 4.7e-59 231.5 144 76.4
BcaB03g13492 Brassica carinata HOM05D006500 ORTHO05D008028 1.4e-58 229.9 153 69.3
BraA09t42063Z Brassica rapa HOM05D006500 ORTHO05D008028 1.4e-58 229.9 146 71.2
BolC8t47013H Brassica oleracea HOM05D006500 ORTHO05D008028 2.3e-58 229.2 153 68.6
Lsat_1_v5_gn_1_74920 Lactuca sativa HOM05D006500 ORTHO05D008028 2.3e-58 229.2 153 71.2
BcaC07g36846 Brassica carinata HOM05D006500 ORTHO05D008028 3.1e-58 228.8 153 68.6
C08p02210 Brassica napus HOM05D006500 ORTHO05D008028 3.1e-58 228.8 153 68.6
ECA248G2222 Erigeron canadensis HOM05D000003 ORTHO05D008028 5.2e-58 228.0 131 79.4
A08p36310 Brassica napus HOM05D006500 ORTHO05D008028 8.9e-58 227.3 153 67.3
BraA08t35535Z Brassica rapa HOM05D006500 ORTHO05D008028 1.2e-57 226.9 153 67.3
CDE04G3295 Ceratophyllum demersum HOM05D006500 ORTHO05D008028 4.4e-57 224.9 151 68.9
FAN22G1805 Fragaria x ananassa HOM05D006500 ORTHO05D008028 1.3e-56 223.4 202 59.4
ATR0743G133 Amborella trichopoda HOM05D006500 ORTHO05D008028 2.2e-56 222.6 151 68.9
HPP92_003580 Vanilla planifolia HOM05D006500 ORTHO05D008028 3.7e-56 221.9 147 72.1
FAN12G1276 Fragaria x ananassa HOM05D006500 ORTHO05D008028 4.9e-56 221.5 208 58.7
FAN07G0402 Fragaria x ananassa HOM05D006500 ORTHO05D008028 6.4e-56 221.1 202 59.4
Os01g0894500 Oryza sativa ssp. japonica HOM05D006500 ORTHO05D008028 8.3e-56 220.7 137 72.3
Zm00001eb144900 Zea mays HOM05D006500 ORTHO05D008028 8.3e-56 220.7 148 69.6
Aa31LG1G8630 Aethionema arabicum HOM05D006500 ORTHO05D008028 4.1e-55 218.4 173 61.3
unitig_46.g18636 Utricularia gibba HOM05D006500 ORTHO05D008028 8.6e-53 210.7 149 67.8
Lj3A158T10 Lonicera japonica HOM05D006500 ORTHO05D008028 4.3e-52 208.4 136 77.2
SEGI_07767 Sequoiadendron giganteum HOM05D006500 ORTHO05D008028 5.6e-52 208.0 132 70.5
Haze_01362 Corylus avellana HOM05D006500 ORTHO05D008028 1.0e-45 187.2 155 64.5
TPR.G23526 Trifolium pratense HOM05D006500 ORTHO05D008028 3.9e-45 185.3 97 91.8
Pp3c14_2450 Physcomitrium patens HOM05D006500 ORTHO05D008028 1.8e-42 176.4 145 55.2
SMO119G0117 Selaginella moellendorffii HOM05D006500 ORTHO05D008028 1.8e-42 176.4 128 60.2
MBI08_g33171_MAGBIO Magnolia biondii HOM05D006500 ORTHO05D008028 2.3e-42 176.0 103 81.6
BcaC07g42121 Brassica carinata HOM05D006500 ORTHO05D008028 2.2e-40 169.5 146 56.2
Nn1g09666 Nelumbo nucifera HOM05D006500 ORTHO05D008028 1.9e-31 139.8 83 78.3
SHI33478 Sapria himalayana HOM05D000105 ORTHO05D000023 1.2e-22 110.5 83 61.4
Ciclev10023175m.g Citrus clementina HOM05D006500 ORTHO05D008028 2.3e-21 106.3 68 73.5
Cre01.g038950 Chlamydomonas reinhardtii HOM05D006500 ORTHO05D008028 1.3e-16 90.5 149 36.9
CBR_g27901 Chara braunii HOM05D006500 ORTHO05D008028 2.1e-14 83.2 127 36.2
CAN.G701.5 Capsicum annuum HOM05D006500 ORTHO05D008028 3.5e-14 82.4 80 53.8
MBI08_g33170_MAGBIO Magnolia biondii HOM05D006500 ORTHO05D008028 9.3e-07 57.8 47 57.4


User provided reference genes

Program Settings