Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G295900 Phaseolus vulgaris HOM05D006662 ORTHO05D008378 1.4e-107 392.9 195 100.0
VMungo0251G2580 Vigna mungo HOM05D006662 ORTHO05D008378 5.2e-89 331.3 201 83.6
Glyma.02G136700 Glycine max HOM05D006662 ORTHO05D008378 1.9e-83 312.8 202 78.7
Glyma.07G208750 Glycine max HOM05D006662 ORTHO05D000003 3.2e-75 285.4 190 78.9
Ca_18646_v3 Cicer arietinum L. HOM05D006662 ORTHO05D008378 1.4e-73 280.0 204 70.6
Lj4g0000402 Lotus japonicus HOM05D006662 ORTHO05D008378 3.4e-72 275.4 202 70.3
Lalb_Chr05g0218931 Lupinus albus HOM05D006662 ORTHO05D008378 8.3e-71 270.8 205 69.8
arahy.Tifrunner.gnm1.ann1.XIH6CG Arachis hypogaea HOM05D006662 ORTHO05D008378 5.4e-70 268.1 206 66.5
arahy.Tifrunner.gnm1.ann1.WYH7K2 Arachis hypogaea HOM05D006662 ORTHO05D008378 2.7e-69 265.8 206 65.5
Lalb_Chr16g0384501 Lupinus albus HOM05D006662 ORTHO05D008378 8.0e-66 254.2 207 65.7
TPR.G23518 Trifolium pratense HOM05D006662 ORTHO05D008378 1.8e-65 253.1 202 64.4
ClCG09G017640 Citrullus lanatus HOM05D006662 ORTHO05D008378 1.2e-64 250.4 209 61.7
CiPaw.05G058200 Carya illinoinensis HOM05D006662 ORTHO05D008378 2.6e-64 249.2 205 63.4
MD10G1087700 Malus domestica HOM05D006662 ORTHO05D008378 2.6e-64 249.2 202 63.4
QL11p039030 Quercus lobata HOM05D006662 ORTHO05D008378 2.9e-63 245.7 166 71.1
CANSAT25G1076 Cannabis sativa HOM05D006662 ORTHO05D008378 4.9e-63 245.0 203 65.0
Hma1.2p1_0584F.1_g183200 Hydrangea macrophylla HOM05D006662 ORTHO05D008378 8.3e-63 244.2 200 61.5
MD05G1073200 Malus domestica HOM05D006662 ORTHO05D008378 8.3e-63 244.2 194 63.4
Prupe.8G113800 Prunus persica HOM05D006662 ORTHO05D008378 1.4e-62 243.4 205 61.0
QL11p040314 Quercus lobata HOM05D006662 ORTHO05D008378 2.4e-62 242.7 167 70.7
Cpa.g.sc62.73 Carica papaya HOM05D006662 ORTHO05D008378 3.2e-62 242.3 183 65.0
Psat7g120680 Pisum sativum HOM05D006662 ORTHO05D008378 5.4e-62 241.5 194 63.4
CsaV3_2G014240 Cucumis sativus L. HOM05D006662 ORTHO05D008378 7.0e-62 241.1 210 57.6
MELO3C021923.2 Cucumis melo HOM05D006662 ORTHO05D008378 9.2e-62 240.7 210 58.1
PGR142G1799 Punica granatum HOM05D006662 ORTHO05D008378 9.2e-62 240.7 200 59.0
Thecc.02G093600 Theobroma cacao HOM05D006662 ORTHO05D008378 9.2e-62 240.7 183 67.2
TWI75G0095 Tripterygium wilfordii HOM05D006662 ORTHO05D008378 9.2e-62 240.7 197 62.9
Medtr4g087160 Medicago truncatula HOM05D006662 ORTHO05D008378 1.6e-61 240.0 166 70.5
GSVIVG01031844001 Vitis vinifera HOM05D006662 ORTHO05D008378 1.6e-61 240.0 195 63.1
Manes.17G095800 Manihot esculenta HOM05D006662 ORTHO05D008378 5.9e-61 238.0 209 58.4
Cfa004939 Carpinus fangiana HOM05D006662 ORTHO05D008378 1.0e-60 237.3 205 60.5
Eucgr.I01209 Eucalyptus grandis HOM05D006662 ORTHO05D008378 1.3e-60 236.9 191 62.8
Sed0006883 Sechium edule HOM05D006662 ORTHO05D008378 2.3e-60 236.1 208 59.1
HanXRQChr16g0505251 Helianthus annuus HOM05D006662 ORTHO05D008378 3.0e-60 235.7 195 58.5
Oeu034073.1 Olea europaea HOM05D006662 ORTHO05D008378 3.9e-60 235.3 180 63.3
Oeu034074.1 Olea europaea HOM05D006662 ORTHO05D008378 6.6e-60 234.6 180 63.3
FAN15G0063 Fragaria x ananassa HOM05D006662 ORTHO05D008378 8.6e-60 234.2 201 60.7
MSTRG.16773 Avicennia marina HOM05D006662 ORTHO05D008378 1.1e-59 233.8 191 61.3
TAR381G0443 Trochodendron aralioides HOM05D006662 ORTHO05D008378 1.1e-59 233.8 198 59.6
Potri.009G108200 Populus trichocarpa HOM05D006662 ORTHO05D008378 1.5e-59 233.4 205 59.0
Ciclev10029278m.g Citrus clementina HOM05D006662 ORTHO05D008378 1.9e-59 233.0 187 65.8
unitig_60.g25450 Utricularia gibba HOM05D006662 ORTHO05D008378 1.9e-59 233.0 192 62.0
TWI79G0535 Tripterygium wilfordii HOM05D006662 ORTHO05D008378 2.5e-59 232.6 192 62.0
DCAR_022073 Daucus carota HOM05D006662 ORTHO05D008378 4.3e-59 231.9 190 59.5
Ah.01g019950 Amaranthus hybridus HOM05D006662 ORTHO05D008378 5.6e-59 231.5 190 61.1
CSS0011742 Camellia sinensis var. sinensis HOM05D006662 ORTHO05D008378 7.3e-59 231.1 171 64.3
Lsat_1_v5_gn_7_87521 Lactuca sativa HOM05D006662 ORTHO05D008378 9.5e-59 230.7 178 60.7
TAR625G0716 Trochodendron aralioides HOM05D006662 ORTHO05D008378 1.2e-58 230.3 192 57.3
Sed0017443 Sechium edule HOM05D006662 ORTHO05D008378 2.1e-58 229.6 202 59.9
FvH4_2g07110 Fragaria vesca HOM05D006662 ORTHO05D008378 2.8e-58 229.2 202 60.9
RcHm_v2.0_Chr6g0259611 Rosa chinensis HOM05D006662 ORTHO05D008378 3.6e-58 228.8 203 60.6
THA.LOC104807344 Tarenaya hassleriana HOM05D006662 ORTHO05D008378 6.2e-58 228.0 179 65.4
SGA_v2.0_scaffold32G13129 Striga asiatica HOM05D006662 ORTHO05D008378 8.0e-58 227.6 196 59.7
Nn6g32129 Nelumbo nucifera HOM05D006662 ORTHO05D008378 1.1e-57 227.3 197 59.9
Gohir.D12G026500 Gossypium hirsutum HOM05D006662 ORTHO05D008378 3.1e-57 225.7 213 58.2
Peaxi162Scf00016g01334 Petunia axillaris HOM05D006662 ORTHO05D008378 3.1e-57 225.7 177 61.6
FAN20G1592 Fragaria x ananassa HOM05D006662 ORTHO05D008378 4.0e-57 225.3 202 59.9
Sc18g0004870 Simmondsia chinensis HOM05D006662 ORTHO05D008378 5.2e-57 224.9 195 59.0
PGSC0003DMG400025927 Solanum tuberosum HOM05D006662 ORTHO05D008378 5.2e-57 224.9 185 61.1
MSTRG.20127 Avicennia marina HOM05D006662 ORTHO05D008378 6.8e-57 224.6 196 56.6
Gohir.A12G027000 Gossypium hirsutum HOM05D006662 ORTHO05D008378 8.9e-57 224.2 215 58.1
Cc02_g18370 Coffea canephora HOM05D006662 ORTHO05D008378 1.2e-56 223.8 191 60.7
MBI16_g19891_MAGBIO Magnolia biondii HOM05D006662 ORTHO05D008378 1.5e-56 223.4 179 57.5
Manes.15G144700 Manihot esculenta HOM05D006662 ORTHO05D008378 2.6e-56 222.6 177 62.1
Nitab4.5_0001401g0110 Nicotiana tabacum HOM05D006662 ORTHO05D008378 4.4e-56 221.9 163 63.8
Sopen01g051110 Solanum pennellii HOM05D006662 ORTHO05D008378 1.3e-55 220.3 185 60.5
Solyc01g108910.4 Solanum lycopersicum HOM05D006662 ORTHO05D008378 1.7e-55 219.9 185 60.5
Haze_02471 Corylus avellana HOM05D006662 ORTHO05D008378 2.2e-55 219.5 229 53.7
Nitab4.5_0013034g0030 Nicotiana tabacum HOM05D006662 ORTHO05D008378 2.9e-55 219.2 163 63.2
Ciclev10029277m.g Citrus clementina HOM05D006662 ORTHO05D008378 3.7e-55 218.8 187 62.0
COL.COLO4_11735 Corchorus olitorius HOM05D006662 ORTHO05D008378 3.7e-55 218.8 177 62.1
Sp3g29170 Schrenkiella parvula HOM05D006662 ORTHO05D008378 6.4e-55 218.0 198 58.6
AUR62011410 Chenopodium quinoa HOM05D006662 ORTHO05D008378 2.4e-54 216.1 183 56.8
SalBow6G2487 Salvia bowleyana HOM05D006662 ORTHO05D008378 4.1e-54 215.3 193 58.5
AUR62016649 Chenopodium quinoa HOM05D006662 ORTHO05D008378 1.2e-53 213.8 200 55.0
ECA236G2218 Erigeron canadensis HOM05D001803 ORTHO05D001686 1.2e-53 213.8 177 58.2
Thhalv10022827m.g Eutrema salsugineum HOM05D006662 ORTHO05D008378 2.0e-53 213.0 199 57.3
Aa31LG8G13410 Aethionema arabicum HOM05D006662 ORTHO05D008378 3.5e-53 212.2 174 63.2
BcaB08g34616 Brassica carinata HOM05D006662 ORTHO05D008378 3.5e-53 212.2 173 61.3
CARHR106220 Cardamine hirsuta HOM05D006662 ORTHO05D008378 3.5e-53 212.2 172 61.6
A03p45640 Brassica napus HOM05D006662 ORTHO05D008378 4.6e-53 211.8 176 60.8
ECA234G3259 Erigeron canadensis HOM05D006662 ORTHO05D008378 4.6e-53 211.8 195 53.3
Sabra09G0082500 Salix brachista HOM05D006662 ORTHO05D008378 6.0e-53 211.5 198 56.6
AL3G47680 Arabidopsis lyrata HOM05D006662 ORTHO05D008378 7.8e-53 211.1 187 59.4
AT2G15890 Arabidopsis thaliana HOM05D006662 ORTHO05D008378 7.8e-53 211.1 190 57.9
Atru.chr5.2838 Acer truncatum HOM05D006662 ORTHO05D008378 1.0e-52 210.7 166 64.5
Gorai.008G026800 Gossypium raimondii HOM05D006662 ORTHO05D008378 1.0e-52 210.7 240 51.7
Oeu057667.1 Olea europaea HOM05D006662 ORTHO05D008378 1.0e-52 210.7 167 62.9
BcaC01g03048 Brassica carinata HOM05D006662 ORTHO05D008378 1.7e-52 209.9 176 60.8
C03p56690 Brassica napus HOM05D006662 ORTHO05D008378 1.7e-52 209.9 176 60.8
BolC3t17953H Brassica oleracea HOM05D006662 ORTHO05D008378 1.7e-52 209.9 176 60.8
BraA03t13696Z Brassica rapa HOM05D006662 ORTHO05D008378 2.3e-52 209.5 176 60.2
PSO541G1188 Papaver somniferum HOM05D006662 ORTHO05D008378 7.3e-51 204.5 161 57.8
Migut.B00297 Erythranthe guttata HOM05D006662 ORTHO05D008378 9.5e-51 204.1 150 64.7
CDE04G2620 Ceratophyllum demersum HOM05D006662 ORTHO05D008378 2.1e-50 203.0 181 55.2
Carub.0003s2977 Capsella rubella HOM05D006662 ORTHO05D008378 3.6e-50 202.2 187 54.5
CDE02G2985 Ceratophyllum demersum HOM05D006662 ORTHO05D008378 3.6e-50 202.2 181 56.9
ATR0733G082 Amborella trichopoda HOM05D006662 ORTHO05D008378 8.1e-50 201.1 192 55.2
PSO675G4443 Papaver somniferum HOM05D006662 ORTHO05D008378 1.5e-48 196.8 161 55.9
Duzib132G0812 Durio zibethinus HOM05D006662 ORTHO05D008378 4.9e-47 191.8 202 53.0
Aqoxy6G00923 Aquilegia oxysepala HOM05D006662 ORTHO05D008378 2.4e-46 189.5 177 54.2
EL10Ac9g21803 Beta vulgaris HOM05D006662 ORTHO05D008378 3.2e-46 189.1 190 53.7
Zm00001eb058550 Zea mays HOM05D006662 ORTHO05D008378 2.2e-39 166.4 203 47.3
HPP92_017773 Vanilla planifolia HOM05D006662 ORTHO05D008378 1.9e-38 163.3 195 46.2
Hund06197 Selenicereus undatus HOM05D006662 ORTHO05D008378 7.1e-38 161.4 178 48.3
Zm00001eb214110 Zea mays HOM05D006662 ORTHO05D008378 2.1e-37 159.8 205 44.9
Dinv23602 Davidia involucrata HOM05D000546 ORTHO05D000398 1.6e-34 150.2 115 65.2
SEGI_00093 Sequoiadendron giganteum HOM05D006662 ORTHO05D008378 2.6e-32 142.9 176 44.9
Lj9A364T65 Lonicera japonica HOM05D006662 ORTHO05D008378 5.8e-32 141.7 212 39.2
Actinidia00472 Actinidia chinensis HOM05D006662 ORTHO05D008378 2.2e-31 139.8 159 46.5
Duzib052G0855 Durio zibethinus HOM05D006662 ORTHO05D008378 8.4e-23 111.3 76 71.1
Peaxi162Scf00068g00075 Petunia axillaris HOM05D006662 ORTHO05D008378 1.8e-20 103.6 91 57.1
AagrBONN_evm.TU.Sc2ySwM_117.2125 Anthoceros agrestis HOM05D006662 ORTHO05D008378 6.7e-20 101.7 219 31.5
SMO351G0555 Selaginella moellendorffii HOM05D006662 ORTHO05D008378 2.5e-19 99.8 179 32.4
Pp3c25_14850 Physcomitrium patens HOM05D006662 ORTHO05D008378 4.3e-19 99.0 216 31.9
Mapoly0184s0005 Marchantia polymorpha HOM05D006662 ORTHO05D008378 1.2e-16 90.9 222 27.5
Os03g0765500 Oryza sativa ssp. japonica HOM05D006662 ORTHO05D008378 4.5e-16 89.0 182 33.0
HanXRQChr16g0505241 Helianthus annuus HOM05D000009 ORTHO05D000008 7.6e-16 88.2 97 47.4
Peaxi162Scf00140g10022 Petunia axillaris HOM05D006662 ORTHO05D008378 1.8e-12 77.0 100 46.0
Pp3c5_28350 Physcomitrium patens HOM05D006662 ORTHO05D008378 2.4e-09 66.6 173 26.6
Rhsim11G0170000 Rhododendron simsii HOM05D006662 ORTHO05D008378 1.5e-08 63.9 105 32.4


User provided reference genes

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