Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G292600 Phaseolus vulgaris HOM05D007022 ORTHO05D008868 1.2e-95 353.2 181 100.0
VMungo0251G0366 Vigna mungo HOM05D007022 ORTHO05D008868 4.5e-87 324.7 194 83.0
Glyma.07G212100 Glycine max HOM05D007022 ORTHO05D008868 7.2e-85 317.4 181 88.4
Glyma.02G132900 Glycine max HOM05D007022 ORTHO05D008868 1.4e-83 313.2 182 87.4
Lj4g0019449 Lotus japonicus HOM05D007022 ORTHO05D008868 2.0e-55 219.5 197 60.9
Ca_18680_v3 Cicer arietinum L. HOM05D007022 ORTHO05D008868 1.7e-54 216.5 204 62.7
Ciclev10029362m.g Citrus clementina HOM05D007022 ORTHO05D008868 1.1e-53 213.8 188 61.2
Atru.chr5.2709 Acer truncatum HOM05D007022 ORTHO05D008868 1.6e-52 209.9 180 67.2
Haze_10076 Corylus avellana HOM05D007022 ORTHO05D008868 2.7e-52 209.1 229 52.4
CiPaw.06G172800 Carya illinoinensis HOM05D007022 ORTHO05D008868 6.1e-52 208.0 186 59.7
Sed0002892 Sechium edule HOM05D007022 ORTHO05D008868 1.8e-51 206.5 200 61.0
Lalb_Chr16g0384701 Lupinus albus HOM05D007022 ORTHO05D008868 5.2e-51 204.9 182 62.6
Gohir.D13G038800 Gossypium hirsutum HOM05D007022 ORTHO05D008868 1.2e-50 203.8 178 61.2
Gorai.013G043500 Gossypium raimondii HOM05D007022 ORTHO05D008868 1.2e-50 203.8 178 61.2
TPR.G28492 Trifolium pratense HOM05D007022 ORTHO05D008868 2.6e-50 202.6 169 67.5
Psat7g125000 Pisum sativum HOM05D007022 ORTHO05D008868 3.4e-50 202.2 184 64.1
ClCG05G010000 Citrullus lanatus HOM05D007022 ORTHO05D008868 4.4e-50 201.8 186 65.6
Gohir.A13G040100 Gossypium hirsutum HOM05D007022 ORTHO05D008868 7.5e-50 201.1 178 60.1
MD10G1094200 Malus domestica HOM05D007022 ORTHO05D008868 9.8e-50 200.7 193 62.2
Prupe.8G124000 Prunus persica HOM05D007022 ORTHO05D008868 3.7e-49 198.7 200 61.5
PGR042G2146 Punica granatum HOM05D007022 ORTHO05D008868 3.7e-49 198.7 181 58.0
Manes.07G082700 Manihot esculenta HOM05D007022 ORTHO05D008868 3.1e-48 195.7 207 53.6
FvH4_2g06130 Fragaria vesca HOM05D007022 ORTHO05D008868 4.1e-48 195.3 195 59.5
RcHm_v2.0_Chr6g0257061 Rosa chinensis HOM05D007022 ORTHO05D008868 9.1e-48 194.1 197 60.4
Rhsim11G0166300 Rhododendron simsii HOM05D007022 ORTHO05D008868 1.6e-47 193.4 194 55.7
Potri.009G102400 Populus trichocarpa HOM05D007022 ORTHO05D008868 2.0e-47 193.0 192 57.8
QL11p035981 Quercus lobata HOM05D007022 ORTHO05D008868 2.7e-47 192.6 195 53.8
CsaV3_3G018570 Cucumis sativus L. HOM05D007022 ORTHO05D008868 5.9e-47 191.4 196 61.2
MBI06_g36648_MAGBIO Magnolia biondii HOM05D007022 ORTHO05D008868 7.7e-47 191.0 192 55.2
Thecc.02G100400 Theobroma cacao HOM05D007022 ORTHO05D008868 2.3e-46 189.5 182 54.4
TWI75G1380 Tripterygium wilfordii HOM05D007022 ORTHO05D008868 3.8e-46 188.7 191 60.7
COL.COLO4_32660 Corchorus olitorius HOM05D007022 ORTHO05D003154 6.6e-46 188.0 180 54.4
Cpa.g.sc62.15 Carica papaya HOM05D007022 ORTHO05D008868 1.1e-45 187.2 208 53.8
vmacro02203 Vaccinium macrocarpon HOM05D007022 ORTHO05D008868 1.1e-45 187.2 186 56.5
MELO3C019509.2 Cucumis melo HOM05D007022 ORTHO05D008868 1.5e-45 186.8 206 58.3
HanXRQChr09g0251721 Helianthus annuus HOM05D007022 ORTHO05D008868 2.5e-45 186.0 113 83.2
Nn1g04883 Nelumbo nucifera HOM05D007022 ORTHO05D008868 2.5e-45 186.0 173 57.8
Lsat_1_v5_gn_9_110080 Lactuca sativa HOM05D007022 ORTHO05D008868 5.5e-45 184.9 113 82.3
Actinidia12953 Actinidia chinensis HOM05D007022 ORTHO05D008868 1.6e-44 183.3 173 57.2
CANSAT25G3754 Cannabis sativa HOM05D007022 ORTHO05D008868 1.6e-44 183.3 187 56.1
CDE04G2473 Ceratophyllum demersum HOM05D007022 ORTHO05D008868 2.8e-44 182.6 109 75.2
Nitab4.5_0002543g0040 Nicotiana tabacum HOM05D007022 ORTHO05D008868 2.8e-44 182.6 114 74.6
Dinv23619 Davidia involucrata HOM05D007022 ORTHO05D008868 3.6e-44 182.2 193 53.4
GSVIVG01031751001 Vitis vinifera HOM05D007022 ORTHO05D008868 3.6e-44 182.2 185 54.6
CSS0015269 Camellia sinensis var. sinensis HOM05D007022 ORTHO05D008868 1.8e-43 179.9 174 60.9
Peaxi162Scf00016g01823 Petunia axillaris HOM05D007022 ORTHO05D008868 4.0e-43 178.7 176 58.5
Hma1.2p1_0370F.1_g137830 Hydrangea macrophylla HOM05D007022 ORTHO05D008868 6.8e-43 177.9 176 56.8
TAR381G0954 Trochodendron aralioides HOM05D007022 ORTHO05D008868 1.2e-42 177.2 179 54.2
Aqoxy6G01341 Aquilegia oxysepala HOM05D007022 ORTHO05D008868 1.5e-42 176.8 119 70.6
Hund00236 Selenicereus undatus HOM05D007022 ORTHO05D008868 2.0e-42 176.4 179 57.5
SGA_v2.0_scaffold13G06591 Striga asiatica HOM05D007022 ORTHO05D008868 2.0e-42 176.4 169 58.0
Cc02_g18740 Coffea canephora HOM05D007022 ORTHO05D008868 2.6e-42 176.0 184 53.3
arahy.Tifrunner.gnm1.ann1.059Z6S Arachis hypogaea HOM05D007022 ORTHO05D008868 5.7e-42 174.9 190 57.4
unitig_26.g10239 Utricularia gibba HOM05D007022 ORTHO05D008868 5.7e-42 174.9 147 58.5
MSTRG.27723 Avicennia marina HOM05D007022 ORTHO05D008868 9.8e-42 174.1 113 69.0
ECA240G1411 Erigeron canadensis HOM05D007022 ORTHO05D008868 2.2e-41 172.9 121 73.6
Nitab4.5_0007480g0010 Nicotiana tabacum HOM05D007022 ORTHO05D008868 2.2e-41 172.9 174 56.3
BcaB06g25978 Brassica carinata HOM05D007022 ORTHO05D008868 4.9e-41 171.8 170 57.1
Thhalv10021599m.g Eutrema salsugineum HOM05D007022 ORTHO05D008868 5.4e-40 168.3 177 54.8
Aa31LG8G6010 Aethionema arabicum HOM05D007022 ORTHO05D008868 7.0e-40 167.9 175 55.4
Migut.B00344 Erythranthe guttata HOM05D007022 ORTHO05D008868 9.2e-40 167.5 169 53.8
THA.LOC104798819 Tarenaya hassleriana HOM05D007022 ORTHO05D008868 1.6e-39 166.8 99 76.8
SalBow6G3975 Salvia bowleyana HOM05D007022 ORTHO05D008868 5.9e-39 164.9 170 54.1
Nn5g30258 Nelumbo nucifera HOM05D007022 ORTHO05D008868 7.8e-39 164.5 144 56.9
PSO675G2542 Papaver somniferum HOM05D007022 ORTHO05D008868 7.8e-39 164.5 210 51.9
AT3G19220 Arabidopsis thaliana HOM05D007022 ORTHO05D008868 1.0e-38 164.1 177 54.2
Dinv42154 Davidia involucrata HOM05D007022 ORTHO05D008868 1.0e-38 164.1 164 54.9
Oeu007283.1 Olea europaea HOM05D007022 ORTHO05D008868 1.3e-38 163.7 183 51.9
PSO541G2619 Papaver somniferum HOM05D007022 ORTHO05D008868 1.3e-38 163.7 165 59.4
A05p30420 Brassica napus HOM05D007022 ORTHO05D008868 1.7e-38 163.3 178 53.9
BcaC05g28522 Brassica carinata HOM05D007022 ORTHO05D008868 2.3e-38 162.9 170 54.7
Sp3g17290 Schrenkiella parvula HOM05D007022 ORTHO05D008868 2.3e-38 162.9 122 66.4
BolC5t33329H Brassica oleracea HOM05D007022 ORTHO05D008868 3.9e-38 162.2 165 56.4
Solyc01g108200.3 Solanum lycopersicum HOM05D007022 ORTHO05D008868 5.0e-38 161.8 113 67.3
Sopen01g050430 Solanum pennellii HOM05D007022 ORTHO05D008868 5.0e-38 161.8 113 67.3
AL3G32600 Arabidopsis lyrata HOM05D007022 ORTHO05D008868 6.6e-38 161.4 168 54.8
BraA05t21880Z Brassica rapa HOM05D007022 ORTHO05D008868 8.6e-38 161.0 173 55.5
FAN15G0654 Fragaria x ananassa HOM05D007022 ORTHO05D008868 1.1e-37 160.6 163 53.4
Ah.01g019040 Amaranthus hybridus HOM05D007022 ORTHO05D008868 1.5e-37 160.2 162 58.6
Carub.0003s1905 Capsella rubella HOM05D007022 ORTHO05D008868 1.9e-37 159.8 176 53.4
FAN20G2768 Fragaria x ananassa HOM05D007022 ORTHO05D008868 3.3e-37 159.1 163 52.8
FAN24G2553 Fragaria x ananassa HOM05D007022 ORTHO05D008868 3.3e-37 159.1 163 53.4
arahy.Tifrunner.gnm1.ann1.WB2CJ6 Arachis hypogaea HOM05D007022 ORTHO05D008868 9.5e-37 157.5 166 53.0
Medtr4g086255 Medicago truncatula HOM05D007022 ORTHO05D008868 9.5e-37 157.5 139 61.2
Sopen10g021420 Solanum pennellii HOM05D007022 ORTHO05D008868 1.0e-35 154.1 97 72.2
EL10Ac9g21683 Beta vulgaris HOM05D007022 ORTHO05D008868 1.4e-35 153.7 136 58.1
ATR0100G054 Amborella trichopoda HOM05D007022 ORTHO05D008868 3.4e-34 149.1 123 61.8
HPP92_016383 Vanilla planifolia HOM05D002198 ORTHO05D008868 3.4e-34 149.1 111 61.3
AUR62016784 Chenopodium quinoa HOM05D007022 ORTHO05D008868 4.4e-34 148.7 107 73.8
Actinidia00443 Actinidia chinensis HOM05D007022 ORTHO05D008868 1.7e-33 146.7 145 54.5
Sc08g0000700 Simmondsia chinensis HOM05D005091 ORTHO05D006047 1.7e-33 146.7 126 60.3
Lj9A358T46 Lonicera japonica HOM05D007022 ORTHO05D008868 6.0e-31 138.3 143 51.7
PGSC0003DMG401025892 Solanum tuberosum HOM05D007022 ORTHO05D008868 7.8e-31 137.9 81 72.8
Oeu013707.1 Olea europaea HOM05D007022 ORTHO05D008868 2.3e-30 136.3 90 68.9
Zm00001eb100830 Zea mays HOM05D007022 ORTHO05D008868 3.9e-30 135.6 186 42.5
CDE03G0325 Ceratophyllum demersum HOM05D007022 ORTHO05D008868 5.6e-29 131.7 78 75.6
Nitab4.5_0005758g0030 Nicotiana tabacum HOM05D007022 ORTHO05D008868 4.0e-27 125.6 129 53.5
Nitab4.5_0012979g0010 Nicotiana tabacum HOM05D007022 ORTHO05D008868 6.8e-27 124.8 124 55.6
Os09g0458400 Oryza sativa ssp. japonica HOM05D007022 ORTHO05D008868 3.7e-25 119.0 79 65.8
AagrBONN_evm.TU.Sc2ySwM_368.1030 Anthoceros agrestis HOM05D007022 ORTHO05D008868 1.9e-24 116.7 163 41.7
Cfa004517 Carpinus fangiana HOM05D007022 ORTHO05D008868 4.1e-24 115.5 132 51.5
CBR_g29933 Chara braunii HOM05D007022 ORTHO05D008868 5.4e-24 115.2 111 52.3
Sopen10g021450 Solanum pennellii HOM05D007022 ORTHO05D008868 7.8e-23 111.3 125 55.2
Sabra09G0078400 Salix brachista HOM05D007022 ORTHO05D008868 1.0e-22 110.9 196 43.9
SMO232G0067 Selaginella moellendorffii HOM05D007022 ORTHO05D008868 8.6e-22 107.8 78 60.3
Pp3c1_42880 Physcomitrium patens HOM05D007022 ORTHO05D008868 2.5e-21 106.3 120 48.3
Pp3c2_400 Physcomitrium patens HOM05D007022 ORTHO05D008868 5.6e-21 105.1 116 48.3
SEGI_10031 Sequoiadendron giganteum HOM05D007022 ORTHO05D008868 5.2e-19 98.6 72 77.8
Rhsim11G0166200 Rhododendron simsii HOM05D007022 ORTHO05D008868 4.4e-18 95.5 74 66.2
Mapoly0186s0009 Marchantia polymorpha HOM05D007022 ORTHO05D008868 2.2e-17 93.2 104 46.2
PGSC0003DMG400006210 Solanum tuberosum HOM05D007022 ORTHO05D008868 3.9e-14 82.4 104 48.1
DCAR_022028 Daucus carota HOM05D007022 ORTHO05D008868 1.6e-12 77.0 115 39.1
CARHR094630 Cardamine hirsuta HOM05D007022 ORTHO05D008868 1.1e-11 74.3 116 44.0
ECA240G0576 Erigeron canadensis HOM05D007022 ORTHO05D008868 1.5e-10 70.5 55 56.4


User provided reference genes

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