Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G291900 Phaseolus vulgaris HOM05D003792 ORTHO05D003195 2.9e-117 425.2 214 100.0
VMungo0251G0642 Vigna mungo HOM05D003792 ORTHO05D003195 7.4e-81 304.3 200 79.0
Glyma.02G131800 Glycine max HOM05D003792 ORTHO05D003195 2.2e-80 302.8 191 80.6
Glyma.07G213000 Glycine max HOM05D003792 ORTHO05D003195 4.8e-64 248.4 190 69.5
Lj4g0023306 Lotus japonicus HOM05D003792 ORTHO05D003195 1.1e-55 220.7 190 62.1
Medtr4g085990 Medicago truncatula HOM05D003792 ORTHO05D003195 1.9e-52 209.9 190 57.9
TPR.G12693 Trifolium pratense HOM05D003792 ORTHO05D003195 2.6e-49 199.5 190 57.4
Psat7g125520 Pisum sativum HOM05D003792 ORTHO05D003195 3.1e-47 192.6 196 56.1
arahy.Tifrunner.gnm1.ann1.SW5XY7 Arachis hypogaea HOM05D003792 ORTHO05D003195 4.1e-47 192.2 186 53.8
arahy.Tifrunner.gnm1.ann1.I5Q2RG Arachis hypogaea HOM05D003792 ORTHO05D003195 5.4e-47 191.8 186 53.8
Lalb_Chr05g0219211 Lupinus albus HOM05D003792 ORTHO05D003195 5.0e-45 185.3 190 55.3
Ca_18691_v3 Cicer arietinum L. HOM05D003792 ORTHO05D003195 3.0e-37 159.5 133 61.7
Lalb_Chr09g0328351 Lupinus albus HOM05D003792 ORTHO05D003195 8.0e-35 151.4 198 48.5
QL11p035325 Quercus lobata HOM05D003792 ORTHO05D003195 1.4e-26 124.0 193 38.9
Dinv42162 Davidia involucrata HOM05D003792 ORTHO05D003195 7.1e-23 111.7 192 37.5
Haze_10092 Corylus avellana HOM05D003792 ORTHO05D003195 2.3e-21 106.7 193 40.4
CANSAT25G2784 Cannabis sativa HOM05D003792 ORTHO05D003195 3.3e-20 102.8 190 34.2
CANSAT25G3506 Cannabis sativa HOM05D003792 ORTHO05D003195 4.3e-20 102.4 190 34.2
Thecc.02G101400 Theobroma cacao HOM05D003792 ORTHO05D003195 1.6e-19 100.5 191 37.2
Dinv15716 Davidia involucrata HOM05D003792 ORTHO05D003195 1.2e-17 94.4 194 34.5
Actinidia00436 Actinidia chinensis HOM05D003792 ORTHO05D003195 9.9e-17 91.3 204 35.8
Gorai.008G024800 Gossypium raimondii HOM05D003792 ORTHO05D003195 9.9e-17 91.3 202 36.6
Gohir.D12G024500 Gossypium hirsutum HOM05D003792 ORTHO05D003195 1.7e-16 90.5 202 36.1
CiPaw.05G007500 Carya illinoinensis HOM05D003792 ORTHO05D003195 1.1e-15 87.8 164 35.4
CSS0015140 Camellia sinensis var. sinensis HOM05D003792 ORTHO05D003195 2.4e-15 86.7 201 31.8
Atru.chr5.2692 Acer truncatum HOM05D003792 ORTHO05D003195 4.1e-15 85.9 193 33.7
MD05G1081700 Malus domestica HOM05D003792 ORTHO05D003195 5.4e-15 85.5 205 34.6
Sabra09G0077200 Salix brachista HOM05D003792 ORTHO05D003195 6.0e-14 82.0 194 32.0
TAR381G1051 Trochodendron aralioides HOM05D003792 ORTHO05D003195 1.0e-13 81.3 204 31.9
Gohir.A12G023800 Gossypium hirsutum HOM05D003792 ORTHO05D003195 1.3e-13 80.9 200 34.5
Rhsim11G0165200 Rhododendron simsii HOM05D003792 ORTHO05D003195 2.3e-13 80.1 195 32.8
Potri.009G101400 Populus trichocarpa HOM05D003792 ORTHO05D003195 3.0e-13 79.7 194 33.0
Duzib248G0608 Durio zibethinus HOM05D003792 ORTHO05D003195 1.1e-12 77.8 195 35.4
Sed0006191 Sechium edule HOM05D003792 ORTHO05D003195 5.6e-12 75.5 198 31.8
TAR376G0615 Trochodendron aralioides HOM05D003792 ORTHO05D003195 5.6e-12 75.5 202 31.7
Dinv39314 Davidia involucrata HOM05D003792 ORTHO05D003195 7.3e-12 75.1 197 31.5
Aa31LG2G16400 Aethionema arabicum HOM05D009953 ORTHO05D003195 1.2e-11 74.3 189 31.2
CSS0036112 Camellia sinensis var. sinensis HOM05D003792 ORTHO05D003195 1.2e-11 74.3 191 31.4
PGR042G0828 Punica granatum HOM05D003792 ORTHO05D003195 2.1e-11 73.6 192 29.2
GSVIVG01031734001 Vitis vinifera HOM05D003792 ORTHO05D003195 2.8e-11 73.2 204 32.4
ClCG02G005970 Citrullus lanatus HOM05D003792 ORTHO05D003195 3.6e-11 72.8 193 32.6
COL.COLO4_32649 Corchorus olitorius HOM05D003465 ORTHO05D004034 8.1e-11 71.6 155 32.9
Prupe.8G126300 Prunus persica HOM05D003792 ORTHO05D003195 1.4e-10 70.9 129 36.4
arahy.Tifrunner.gnm1.ann1.ND8QY1 Arachis hypogaea HOM05D003792 ORTHO05D003195 1.8e-10 70.5 212 29.7
arahy.Tifrunner.gnm1.ann1.V1SQNE Arachis hypogaea HOM05D003792 ORTHO05D003195 1.8e-10 70.5 212 29.7
MELO3C018454.2 Cucumis melo HOM05D003792 ORTHO05D003195 4.0e-10 69.3 185 31.4
Aqoxy6G01313 Aquilegia oxysepala HOM05D003792 ORTHO05D003195 5.2e-10 68.9 196 28.6
Cpa.g.sc62.6 Carica papaya HOM05D003792 ORTHO05D003195 5.2e-10 68.9 248 28.6
TAR628G0921 Trochodendron aralioides HOM05D003792 ORTHO05D003195 6.9e-10 68.6 184 29.9
Dinv35957 Davidia involucrata HOM05D003792 ORTHO05D003195 8.9e-10 68.2 201 31.8
MD15G1082300 Malus domestica HOM05D003792 ORTHO05D003195 8.9e-10 68.2 211 30.3
Glyma.14G083000 Glycine max HOM05D003792 ORTHO05D003195 2.0e-09 67.0 208 27.9
FvH4_2g34400 Fragaria vesca HOM05D003792 ORTHO05D003195 3.4e-09 66.2 221 30.3
FAN15G1261 Fragaria x ananassa HOM05D003792 ORTHO05D003195 3.4e-09 66.2 221 30.3
Peaxi162Scf00016g01956 Petunia axillaris HOM05D011234 ORTHO05D003195 3.4e-09 66.2 197 33.0
Migut.N01186 Erythranthe guttata HOM05D011234 ORTHO05D003195 4.4e-09 65.9 171 31.0
Glyma.17G242100 Glycine max HOM05D003792 ORTHO05D003195 5.8e-09 65.5 204 26.5
Gohir.A01G007200 Gossypium hirsutum HOM05D003792 ORTHO05D003195 7.6e-09 65.1 189 32.3
PSO210G6487 Papaver somniferum HOM05D003792 ORTHO05D003195 9.9e-09 64.7 218 28.4
QL02p004753 Quercus lobata HOM05D003792 ORTHO05D003195 1.3e-08 64.3 202 28.7
RcHm_v2.0_Chr6g0307971 Rosa chinensis HOM05D003792 ORTHO05D003195 2.2e-08 63.5 211 28.0
CSS0021091 Camellia sinensis var. sinensis HOM05D003792 ORTHO05D003195 2.9e-08 63.2 211 28.0
Manes.18G037600 Manihot esculenta HOM05D003792 ORTHO05D003195 3.8e-08 62.8 194 29.9
Nn5g30305 Nelumbo nucifera HOM05D003792 ORTHO05D003195 3.8e-08 62.8 200 27.0
GSVIVG01009490001 Vitis vinifera HOM05D003792 ORTHO05D003195 3.8e-08 62.8 203 28.6
Cfa018558 Carpinus fangiana HOM05D000207 ORTHO05D000606 4.9e-08 62.4 196 28.6
COL.COLO4_26514 Corchorus olitorius HOM05D003792 ORTHO05D003195 4.9e-08 62.4 188 31.9
BraA03t15320Z Brassica rapa HOM05D009953 ORTHO05D003195 6.4e-08 62.0 184 27.7
FAN15G2062 Fragaria x ananassa HOM05D025254 ORTHO05D003195 6.4e-08 62.0 195 30.8
MD08G1101100 Malus domestica HOM05D003792 ORTHO05D003195 6.4e-08 62.0 201 30.3
A03p62520 Brassica napus HOM05D009953 ORTHO05D003195 8.4e-08 61.6 184 28.3
CiPaw.15G055900 Carya illinoinensis HOM05D003792 ORTHO05D003195 8.4e-08 61.6 219 28.8
Lj5C209G18 Lonicera japonica HOM05D003792 ORTHO05D003195 8.4e-08 61.6 142 33.8
Potri.004G140701 Populus trichocarpa HOM05D003792 ORTHO05D003195 8.4e-08 61.6 191 29.3
Lalb_Chr22g0355111 Lupinus albus HOM05D003792 ORTHO05D003195 1.1e-07 61.2 189 29.6
FAN20G1193 Fragaria x ananassa HOM05D025254 ORTHO05D003195 1.4e-07 60.8 196 32.1
Nitab4.5_0000287g0270 Nicotiana tabacum HOM05D003792 ORTHO05D003195 1.4e-07 60.8 200 28.0
FAN27G2730 Fragaria x ananassa HOM05D025254 ORTHO05D003195 1.9e-07 60.5 196 32.1
Sp7g31710 Schrenkiella parvula HOM05D009953 ORTHO05D003195 2.4e-07 60.1 190 27.4
TWI36G0999 Tripterygium wilfordii HOM05D003792 ORTHO05D003195 2.4e-07 60.1 214 26.6
Duzib052G0481 Durio zibethinus HOM05D003792 ORTHO05D003195 3.2e-07 59.7 190 30.5
Gorai.002G008300 Gossypium raimondii HOM05D003792 ORTHO05D003195 3.2e-07 59.7 189 31.2
Oeu012963.1 Olea europaea HOM05D003792 ORTHO05D003195 3.2e-07 59.7 193 29.0
Sabra14G0019900 Salix brachista HOM05D003792 ORTHO05D003195 3.2e-07 59.7 199 28.6
MSTRG.24332 Avicennia marina HOM05D003792 ORTHO05D003195 4.2e-07 59.3 207 27.5
PGSC0003DMG402007970 Solanum tuberosum HOM05D003792 ORTHO05D003195 4.2e-07 59.3 194 29.4
Duzib093G2220 Durio zibethinus HOM05D003792 ORTHO05D003195 5.4e-07 58.9 199 28.6
C07p60100 Brassica napus HOM05D009953 ORTHO05D003195 7.1e-07 58.5 179 25.7
CiPaw.16G043500 Carya illinoinensis HOM05D003792 ORTHO05D003195 7.1e-07 58.5 214 27.6
FvH4_2g05920 Fragaria vesca HOM05D025254 ORTHO05D003195 7.1e-07 58.5 198 33.3
Nitab4.5_0002760g0070 Nicotiana tabacum HOM05D003792 ORTHO05D003195 9.3e-07 58.2 193 28.0
TWI36G1706 Tripterygium wilfordii HOM05D003792 ORTHO05D003195 9.3e-07 58.2 201 26.4
vmacro21518 Vaccinium macrocarpon HOM05D003792 ORTHO05D003195 9.3e-07 58.2 205 28.3
Potri.014G029000 Populus trichocarpa HOM05D003792 ORTHO05D003195 1.2e-06 57.8 202 28.2
MSTRG.20159 Avicennia marina HOM05D011234 ORTHO05D003195 1.6e-06 57.4 209 28.7
BolC7t46450H Brassica oleracea HOM05D009953 ORTHO05D003195 1.6e-06 57.4 180 26.1
Gohir.D01G007300 Gossypium hirsutum HOM05D003792 ORTHO05D003195 1.6e-06 57.4 191 30.4
Solyc04g078880.3 Solanum lycopersicum HOM05D003792 ORTHO05D003195 1.6e-06 57.4 194 28.4
Sopen04g032480 Solanum pennellii HOM05D003792 ORTHO05D003195 1.6e-06 57.4 194 28.9
ECA246G0047 Erigeron canadensis HOM05D003792 ORTHO05D003195 2.1e-06 57.0 195 28.2
Migut.N02709 Erythranthe guttata HOM05D003792 ORTHO05D003195 2.1e-06 57.0 180 26.7
Gorai.010G020000 Gossypium raimondii HOM05D003792 ORTHO05D003195 2.1e-06 57.0 196 30.6
CARHR242110 Cardamine hirsuta HOM05D009953 ORTHO05D003195 2.7e-06 56.6 183 26.8
Oeu025580.1 Olea europaea HOM05D003792 ORTHO05D003195 2.7e-06 56.6 197 29.4
Actinidia22631 Actinidia chinensis HOM05D003792 ORTHO05D003195 4.6e-06 55.8 218 27.5
Gohir.A06G018700 Gossypium hirsutum HOM05D003792 ORTHO05D003195 4.6e-06 55.8 196 30.6
Potri.002G125900 Populus trichocarpa HOM05D003792 ORTHO05D003195 4.6e-06 55.8 202 27.7
Sopen01g050330 Solanum pennellii HOM05D011234 ORTHO05D003195 4.6e-06 55.8 201 29.4
Gohir.A05G202700 Gossypium hirsutum HOM05D003792 ORTHO05D003195 6.0e-06 55.5 165 31.5
Gohir.D06G017100 Gossypium hirsutum HOM05D003792 ORTHO05D003195 6.0e-06 55.5 195 30.3
Lalb_Chr14g0368651 Lupinus albus HOM05D003792 ORTHO05D003195 6.0e-06 55.5 185 29.7
Solyc01g108100.3 Solanum lycopersicum HOM05D011234 ORTHO05D003195 6.0e-06 55.5 201 28.4
VMungo0647G0635 Vigna mungo HOM05D003792 ORTHO05D003195 7.8e-06 55.1 199 26.6


User provided reference genes

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