Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G281600 Phaseolus vulgaris HOM05D007408 ORTHO05D009325 6.5e-87 323.9 154 100.0
VMungo0251G2162 Vigna mungo HOM05D007408 ORTHO05D009325 2.1e-61 239.2 156 76.3
Glyma.16G099500 Glycine max HOM05D007408 ORTHO05D009325 4.4e-51 204.9 159 69.2
Lalb_Chr20g0122411 Lupinus albus HOM05D007408 ORTHO05D009325 9.8e-43 177.2 162 59.3
Lj4g0027659 Lotus japonicus HOM05D007408 ORTHO05D009325 1.7e-39 166.4 159 62.3
Medtr8g069910 Medicago truncatula HOM05D007408 ORTHO05D009325 3.9e-39 165.2 145 60.0
TPR.G24816 Trifolium pratense HOM05D007408 ORTHO05D009325 2.5e-38 162.5 154 57.8
Cfa008792 Carpinus fangiana HOM05D007408 ORTHO05D009325 6.4e-34 147.9 161 53.4
CANSAT64G2960 Cannabis sativa HOM05D007408 ORTHO05D009325 1.9e-33 146.4 172 48.8
CiPaw.06G098200 Carya illinoinensis HOM05D007408 ORTHO05D009325 3.2e-33 145.6 158 50.0
Atru.chr11.1432 Acer truncatum HOM05D007408 ORTHO05D009325 3.9e-31 138.7 159 47.2
MD13G1050800 Malus domestica HOM05D007408 ORTHO05D009325 6.6e-31 137.9 157 50.3
Prupe.1G301300 Prunus persica HOM05D007408 ORTHO05D009325 1.5e-30 136.7 153 47.1
RcHm_v2.0_Chr4g0436431 Rosa chinensis HOM05D007408 ORTHO05D009325 3.3e-30 135.6 158 48.1
arahy.Tifrunner.gnm1.ann1.24G1QJ Arachis hypogaea HOM05D007408 ORTHO05D009325 1.6e-29 133.3 158 50.6
Manes.06G075900 Manihot esculenta HOM05D007408 ORTHO05D009325 2.8e-29 132.5 160 44.4
Psat4g113200 Pisum sativum HOM05D007408 ORTHO05D009325 1.4e-28 130.2 147 51.7
Eucgr.B03072 Eucalyptus grandis HOM05D007408 ORTHO05D009325 3.1e-28 129.0 161 47.2
Haze_11804 Corylus avellana HOM05D007408 ORTHO05D009325 4.0e-28 128.6 121 58.7
TWI79G0837 Tripterygium wilfordii HOM05D007408 ORTHO05D009325 8.9e-28 127.5 155 43.9
PGR119G0146 Punica granatum HOM05D007408 ORTHO05D009325 1.2e-27 127.1 158 46.8
Cc11_g10990 Coffea canephora HOM05D007408 ORTHO05D009325 2.6e-27 125.9 162 46.3
Potri.008G111500 Populus trichocarpa HOM05D007408 ORTHO05D009325 1.4e-25 120.2 160 45.0
Cpa.g.sc1.248 Carica papaya HOM05D007408 ORTHO05D009325 2.4e-25 119.4 127 51.2
FAN07G2148 Fragaria x ananassa HOM05D000085 ORTHO05D000274 3.2e-25 119.0 121 54.5
FAN12G0389 Fragaria x ananassa HOM05D000085 ORTHO05D000274 4.2e-25 118.6 121 54.5
FAN17G1226 Fragaria x ananassa HOM05D000085 ORTHO05D000274 4.2e-25 118.6 121 54.5
Thecc.02G364900 Theobroma cacao HOM05D007408 ORTHO05D009325 7.1e-25 117.9 130 53.1
FAN22G2286 Fragaria x ananassa HOM05D000227 ORTHO05D001491 2.1e-24 116.3 121 53.7
SGA_v2.0_scaffold36G14509 Striga asiatica HOM05D007408 ORTHO05D009325 2.1e-24 116.3 159 45.3
Gorai.008G188700 Gossypium raimondii HOM05D007408 ORTHO05D009325 3.5e-24 115.5 166 40.4
Sabra08G0084200 Salix brachista HOM05D007408 ORTHO05D009325 3.5e-24 115.5 121 50.4
Gohir.D12G176300 Gossypium hirsutum HOM05D007408 ORTHO05D009325 4.6e-24 115.2 166 39.8
Sc11g0002930 Simmondsia chinensis HOM05D007408 ORTHO05D009325 6.0e-24 114.8 158 43.7
HanXRQChr15g0475971 Helianthus annuus HOM05D007408 ORTHO05D009325 3.0e-23 112.5 128 46.9
BcaC06g31130 Brassica carinata HOM05D007408 ORTHO05D009325 8.7e-23 110.9 149 43.6
DCAR_026703 Daucus carota HOM05D002818 ORTHO05D003244 1.5e-22 110.2 123 47.2
TAR629G0610 Trochodendron aralioides HOM05D007408 ORTHO05D009325 2.5e-22 109.4 149 40.9
CsaV3_2G010890 Cucumis sativus L. HOM05D007408 ORTHO05D009325 3.3e-22 109.0 159 44.0
Oeu024124.1 Olea europaea HOM05D007408 ORTHO05D009325 3.3e-22 109.0 123 48.0
Gohir.A12G173800 Gossypium hirsutum HOM05D007408 ORTHO05D009325 1.3e-21 107.1 167 38.9
THA.LOC104805235 Tarenaya hassleriana HOM05D007408 ORTHO05D009325 1.6e-21 106.7 150 46.7
A06p42710 Brassica napus HOM05D007408 ORTHO05D009325 4.8e-21 105.1 149 44.3
HanXRQChr12g0365241 Helianthus annuus HOM05D007408 ORTHO05D009325 6.2e-21 104.8 155 41.9
HanXRQChr17g0551421 Helianthus annuus HOM05D007408 ORTHO05D009325 8.1e-21 104.4 133 44.4
Lsat_1_v5_gn_3_60200 Lactuca sativa HOM05D007408 ORTHO05D009325 1.1e-20 104.0 119 45.4
BcaC06g33976 Brassica carinata HOM05D007408 ORTHO05D009325 1.4e-20 103.6 149 43.0
Ciclev10033573m.g Citrus clementina HOM05D007408 ORTHO05D009325 1.4e-20 103.6 111 49.5
BraA06t27184Z Brassica rapa HOM05D007408 ORTHO05D009325 1.8e-20 103.2 149 43.6
C07p34420 Brassica napus HOM05D007408 ORTHO05D009325 9.0e-20 100.9 149 43.0
CARHR146570 Cardamine hirsuta HOM05D007408 ORTHO05D009325 1.5e-19 100.1 149 42.3
AL5G14110 Arabidopsis lyrata HOM05D007408 ORTHO05D009325 2.6e-19 99.4 150 41.3
Thhalv10005058m.g Eutrema salsugineum HOM05D007408 ORTHO05D009325 3.4e-19 99.0 150 42.0
AT3G25597 Arabidopsis thaliana HOM05D007408 ORTHO05D009325 7.6e-19 97.8 151 41.7
Sp2g14870 Schrenkiella parvula HOM05D007408 ORTHO05D009325 3.8e-18 95.5 150 43.3
A02p33920 Brassica napus HOM05D007408 ORTHO05D009325 4.9e-18 95.1 147 42.9
BraA02t08410Z Brassica rapa HOM05D007408 ORTHO05D009325 4.9e-18 95.1 149 42.3
Carub.0005s0338 Capsella rubella HOM05D007408 ORTHO05D009325 8.4e-18 94.4 153 40.5
SalBow8G1270 Salvia bowleyana HOM05D007408 ORTHO05D009325 8.4e-18 94.4 156 37.2
SalBow8G3082 Salvia bowleyana HOM05D007408 ORTHO05D009325 8.4e-18 94.4 156 37.2
BcaC03g17274 Brassica carinata HOM05D007408 ORTHO05D009325 1.1e-17 94.0 149 40.9
C02p52180 Brassica napus HOM05D007408 ORTHO05D009325 1.1e-17 94.0 149 40.9
BolC2t11303H Brassica oleracea HOM05D007408 ORTHO05D009325 1.1e-17 94.0 149 40.9
Migut.L01119 Erythranthe guttata HOM05D007408 ORTHO05D009325 2.4e-17 92.8 126 43.7
Ah.02g127260 Amaranthus hybridus HOM05D007408 ORTHO05D009325 4.2e-17 92.0 185 32.4
Solyc05g010130.1 Solanum lycopersicum HOM05D007408 ORTHO05D009325 4.2e-17 92.0 116 47.4
THA.LOC104822179 Tarenaya hassleriana HOM05D007408 ORTHO05D009325 5.4e-17 91.7 120 40.8
Sed0018728 Sechium edule HOM05D007408 ORTHO05D009325 9.3e-17 90.9 120 46.7
BcaB07g30265 Brassica carinata HOM05D007408 ORTHO05D009325 1.6e-16 90.1 151 42.4
CARHR061510 Cardamine hirsuta HOM05D007408 ORTHO05D009325 3.0e-15 85.9 114 38.6
Aqoxy3G03838 Aquilegia oxysepala HOM05D007408 ORTHO05D009325 1.5e-14 83.6 163 35.0
MELO3C020393.2 Cucumis melo HOM05D007408 ORTHO05D009325 1.5e-14 83.6 165 36.4
Manes.14G095101 Manihot esculenta HOM05D007408 ORTHO05D009325 1.5e-14 83.6 52 75.0
PSO782G1144 Papaver somniferum HOM05D007408 ORTHO05D009325 2.1e-13 79.7 121 40.5
BcaC05g26429 Brassica carinata HOM05D007408 ORTHO05D009325 6.2e-13 78.2 122 41.0
C05p24760 Brassica napus HOM05D007408 ORTHO05D009325 1.1e-12 77.4 122 41.0
Carub.0002s1524 Capsella rubella HOM05D007408 ORTHO05D009325 1.8e-12 76.6 107 36.4
AT1G68700 Arabidopsis thaliana HOM05D007408 ORTHO05D009325 2.4e-12 76.3 114 36.0
BcaB03g15828 Brassica carinata HOM05D007408 ORTHO05D009325 3.1e-12 75.9 115 33.9
C03p72700 Brassica napus HOM05D007408 ORTHO05D009325 3.1e-12 75.9 119 37.8
BolC3t19568H Brassica oleracea HOM05D007408 ORTHO05D009325 3.1e-12 75.9 119 37.8
A08p27160 Brassica napus HOM05D007408 ORTHO05D009325 4.0e-12 75.5 119 37.8
Sp5g23800 Schrenkiella parvula HOM05D007408 ORTHO05D009325 2.0e-11 73.2 115 34.8
A09p39710 Brassica napus HOM05D007408 ORTHO05D009325 2.6e-11 72.8 118 35.6
BraA09t39470Z Brassica rapa HOM05D007408 ORTHO05D009325 2.6e-11 72.8 118 35.6
AL1G39610 Arabidopsis lyrata HOM05D007408 ORTHO05D009325 3.4e-11 72.4 118 38.1
Sp1g22520 Schrenkiella parvula HOM05D007408 ORTHO05D009325 4.5e-11 72.0 121 36.4
AT1G26140 Arabidopsis thaliana HOM05D007408 ORTHO05D009325 5.8e-11 71.6 117 36.8
BraA08t34661Z Brassica rapa HOM05D007408 ORTHO05D009325 5.8e-11 71.6 119 38.7
Thhalv10009687m.g Eutrema salsugineum HOM05D007408 ORTHO05D009325 5.8e-11 71.6 114 39.5
BolC7t43970H Brassica oleracea HOM05D007408 ORTHO05D009325 9.9e-11 70.9 106 43.4
Carub.0001s2482 Capsella rubella HOM05D007408 ORTHO05D009325 2.2e-10 69.7 121 32.2
C06p41170 Brassica napus HOM05D000085 ORTHO05D000274 8.4e-10 67.8 107 35.5
BcaC08g46321 Brassica carinata HOM05D000085 ORTHO05D000274 1.1e-09 67.4 107 35.5
BolC6t39308H Brassica oleracea HOM05D000085 ORTHO05D000274 1.1e-09 67.4 107 35.5
Lsat_1_v5_gn_8_37901 Lactuca sativa HOM05D007408 ORTHO05D009325 1.4e-09 67.0 137 37.2
A07p35100 Brassica napus HOM05D000085 ORTHO05D000274 2.4e-09 66.2 107 34.6
BraA07t31103Z Brassica rapa HOM05D000085 ORTHO05D000274 2.4e-09 66.2 107 34.6
BcaB03g15446 Brassica carinata HOM05D007408 ORTHO05D009325 4.2e-09 65.5 107 35.5
A07p31850 Brassica napus HOM05D007408 ORTHO05D009325 9.3e-09 64.3 114 31.6
CARHR025780 Cardamine hirsuta HOM05D007408 ORTHO05D009325 9.3e-09 64.3 117 34.2
BraA07t30814Z Brassica rapa HOM05D007408 ORTHO05D009325 1.6e-08 63.5 114 31.6
C06p37420 Brassica napus HOM05D007408 ORTHO05D009325 4.6e-08 62.0 114 31.6
PSO063G0414 Papaver somniferum HOM05D007408 ORTHO05D009325 2.3e-07 59.7 123 36.6
BolC6t38845H Brassica oleracea HOM05D000085 ORTHO05D000274 8.7e-07 57.8 110 32.7
Nitab4.5_0010987g0020 Nicotiana tabacum HOM05D007408 ORTHO05D009325 4.3e-06 55.5 56 53.6
Zm00001eb188590 Zea mays HOM05D038004 ORTHO05D037191 9.6e-06 54.3 124 33.1


User provided reference genes

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