Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G278100 Phaseolus vulgaris HOM05D006782 ORTHO05D009662 4.1e-40 167.5 81 100.0
Glyma.16G108400 Glycine max HOM05D006782 ORTHO05D009662 3.3e-21 104.8 82 63.4
Glyma.16G108500 Glycine max HOM05D006782 ORTHO05D009662 6.2e-20 100.5 86 61.6
VMungo0251G1962 Vigna mungo HOM05D006782 ORTHO05D009662 7.5e-18 93.6 71 69.0
Glyma.16G108700 Glycine max HOM05D006782 ORTHO05D009662 2.9e-17 91.7 80 60.0
VMungo0251G3071 Vigna mungo HOM05D006782 ORTHO05D009662 1.9e-16 89.0 81 60.5
Lj4g0019286 Lotus japonicus HOM05D006782 ORTHO05D009662 1.9e-13 79.0 84 52.4
Medtr5g025730 Medicago truncatula HOM05D006782 ORTHO05D009662 1.9e-13 79.0 80 50.0
Medtr8g072170 Medicago truncatula HOM05D006782 ORTHO05D009662 2.5e-13 78.6 84 56.0
Phvul.002G122700 Phaseolus vulgaris HOM05D006782 ORTHO05D009662 9.5e-13 76.6 85 47.1
Lalb_Chr05g0215191 Lupinus albus HOM05D006782 ORTHO05D009662 1.6e-12 75.9 83 56.6
Glyma.09G218000 Glycine max HOM05D006782 ORTHO05D009662 3.6e-12 74.7 85 50.6
Lalb_Chr16g0380461 Lupinus albus HOM05D006782 ORTHO05D009662 1.1e-11 73.2 83 55.4
QL12p003438 Quercus lobata HOM05D006782 ORTHO05D009662 9.9e-10 66.6 88 48.9
Atru.chr6.2152 Acer truncatum HOM05D006782 ORTHO05D009662 2.9e-09 65.1 86 46.5
Glyma.01G152800 Glycine max HOM05D006782 ORTHO05D009662 6.4e-09 63.9 85 45.9
Lalb_Chr09g0325071 Lupinus albus HOM05D006782 ORTHO05D009662 3.2e-08 61.6 88 48.9
Potri.004G234800 Populus trichocarpa HOM05D008950 ORTHO05D009662 3.2e-08 61.6 88 46.6
arahy.Tifrunner.gnm1.ann1.06JDPW Arachis hypogaea HOM05D006782 ORTHO05D009662 7.1e-08 60.5 81 45.7
arahy.Tifrunner.gnm1.ann1.40LLJ4 Arachis hypogaea HOM05D006782 ORTHO05D009662 7.1e-08 60.5 81 45.7
Ciclev10017790m.g Citrus clementina HOM05D006782 ORTHO05D009662 2.1e-07 58.9 86 46.5
Thecc.03G320800 Theobroma cacao HOM05D006782 ORTHO05D009662 2.1e-07 58.9 85 44.7
Sabra01G0179500 Salix brachista HOM05D008950 ORTHO05D009662 3.5e-07 58.2 92 41.3
FAN08G2704 Fragaria x ananassa HOM05D006782 ORTHO05D009662 6.0e-07 57.4 88 44.3
Lj2g0009146 Lotus japonicus HOM05D006782 ORTHO05D009662 7.8e-07 57.0 86 40.7
Cfa021287 Carpinus fangiana HOM05D006782 ORTHO05D009662 1.0e-06 56.6 83 39.8
FvH4_5g24910 Fragaria vesca HOM05D006782 ORTHO05D009662 1.0e-06 56.6 88 43.2
FAN18G2623 Fragaria x ananassa HOM05D006782 ORTHO05D009662 1.0e-06 56.6 88 43.2
FAN13G1891 Fragaria x ananassa HOM05D006782 ORTHO05D009662 1.7e-06 55.8 88 43.2
FAN04G0916 Fragaria x ananassa HOM05D006782 ORTHO05D009662 5.1e-06 54.3 88 42.0
Gohir.D08G169600 Gossypium hirsutum HOM05D006782 ORTHO05D009662 6.6e-06 53.9 80 37.5
Gorai.004G176800 Gossypium raimondii HOM05D006782 ORTHO05D009662 6.6e-06 53.9 80 37.5
Gohir.A08G148500 Gossypium hirsutum HOM05D006782 ORTHO05D009662 8.6e-06 53.5 80 37.5


User provided reference genes

Program Settings