Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G276100 Phaseolus vulgaris HOM05D005520 ORTHO05D006633 4.8e-111 404.4 197 100.0
VMungo0251G2197 Vigna mungo HOM05D005520 ORTHO05D006633 2.0e-101 372.5 197 91.9
Lj3g0017538 Lotus japonicus HOM05D005520 ORTHO05D006633 7.5e-88 327.4 194 81.4
TPR.G18583 Trifolium pratense HOM05D005520 ORTHO05D006633 1.4e-86 323.2 197 79.7
Lalb_Chr24g0402091 Lupinus albus HOM05D005520 ORTHO05D006633 7.0e-86 320.9 198 79.8
Psat4g180760 Pisum sativum HOM05D005520 ORTHO05D006633 2.1e-85 319.3 197 77.7
TPR.G14598 Trifolium pratense HOM05D005520 ORTHO05D006633 1.3e-84 316.6 197 78.2
arahy.Tifrunner.gnm1.ann1.ZQ2RMB Arachis hypogaea HOM05D005520 ORTHO05D006633 1.2e-82 310.1 198 76.3
arahy.Tifrunner.gnm1.ann1.DF92AY Arachis hypogaea HOM05D005520 ORTHO05D006633 1.7e-79 299.7 213 70.9
Medtr1g050465 Medicago truncatula HOM05D005520 ORTHO05D006633 6.4e-79 297.7 196 73.0
Medtr8g045480 Medicago truncatula HOM05D005520 ORTHO05D006633 6.4e-79 297.7 196 73.5
Lj4g0000264 Lotus japonicus HOM05D005520 ORTHO05D006633 1.3e-76 290.0 194 74.7
Glyma.13G199600 Glycine max HOM05D005520 ORTHO05D006633 4.7e-74 281.6 196 71.9
Cfa004647 Carpinus fangiana HOM05D005520 ORTHO05D006633 4.6e-69 265.0 197 67.5
Haze_10245 Corylus avellana HOM05D005520 ORTHO05D006633 5.1e-68 261.5 197 66.0
CiPaw.06G167100 Carya illinoinensis HOM05D005520 ORTHO05D006633 1.9e-67 259.6 202 66.3
Potri.009G090200 Populus trichocarpa HOM05D005520 ORTHO05D006633 7.3e-67 257.7 197 66.0
RcHm_v2.0_Chr6g0253041 Rosa chinensis HOM05D005520 ORTHO05D006633 1.3e-66 256.9 198 66.2
PGR042G2710 Punica granatum HOM05D005520 ORTHO05D006633 4.8e-66 255.0 194 66.0
Prupe.8G141400 Prunus persica HOM05D005520 ORTHO05D006633 1.8e-65 253.1 197 64.5
CSS0014981 Camellia sinensis var. sinensis HOM05D005520 ORTHO05D006633 5.3e-65 251.5 195 64.6
Dinv42222 Davidia involucrata HOM05D005520 ORTHO05D006633 6.9e-65 251.1 197 65.5
Sabra09G0069800 Salix brachista HOM05D005520 ORTHO05D006633 6.9e-65 251.1 197 63.5
MD10G1103100 Malus domestica HOM05D005520 ORTHO05D006633 1.2e-64 250.4 196 63.3
Thhalv10011740m.g Eutrema salsugineum HOM05D005520 ORTHO05D006633 1.5e-64 250.0 193 65.3
Eucgr.G01264 Eucalyptus grandis HOM05D005520 ORTHO05D006633 2.0e-64 249.6 195 64.1
Dinv15795 Davidia involucrata HOM05D005520 ORTHO05D006633 2.6e-64 249.2 195 66.2
Actinidia34369 Actinidia chinensis HOM05D005520 ORTHO05D006633 4.4e-64 248.4 196 62.8
Duzib052G0352 Durio zibethinus HOM05D005520 ORTHO05D006633 4.4e-64 248.4 188 64.4
Carub.0001s3909 Capsella rubella HOM05D005520 ORTHO05D006633 5.8e-64 248.1 193 63.2
Ciclev10029310m.g Citrus clementina HOM05D005520 ORTHO05D006633 7.6e-64 247.7 192 65.1
MD05G1097000 Malus domestica HOM05D005520 ORTHO05D006633 2.9e-63 245.7 202 60.4
THA.LOC104825832 Tarenaya hassleriana HOM05D005520 ORTHO05D006633 2.9e-63 245.7 191 64.4
TWI14G1052 Tripterygium wilfordii HOM05D005520 ORTHO05D006633 2.9e-63 245.7 202 59.4
FAN20G2059 Fragaria x ananassa HOM05D005520 ORTHO05D006633 3.8e-63 245.4 215 59.1
Rhsim11G0154200 Rhododendron simsii HOM05D005520 ORTHO05D006633 3.8e-63 245.4 195 63.6
AL1G57420 Arabidopsis lyrata HOM05D005520 ORTHO05D006633 4.9e-63 245.0 190 64.7
Sp1g36760 Schrenkiella parvula HOM05D005520 ORTHO05D006633 8.4e-63 244.2 196 63.8
Manes.10G081300 Manihot esculenta HOM05D005520 ORTHO05D006633 1.1e-62 243.8 190 63.7
QL11p031741 Quercus lobata HOM05D005520 ORTHO05D006633 1.1e-62 243.8 269 51.3
Rhsim05G0090000 Rhododendron simsii HOM05D005520 ORTHO05D006633 1.9e-62 243.0 199 62.3
BolC3t21249H Brassica oleracea HOM05D005520 ORTHO05D006633 2.4e-62 242.7 193 63.2
Cpa.g.sc106.74 Carica papaya HOM05D005520 ORTHO05D006633 2.4e-62 242.7 209 58.9
CARHR039940 Cardamine hirsuta HOM05D005520 ORTHO05D006633 3.2e-62 242.3 185 63.8
GSVIVG01037859001 Vitis vinifera HOM05D005520 ORTHO05D006633 4.2e-62 241.9 190 62.1
C03p89340 Brassica napus HOM05D005520 ORTHO05D006633 5.4e-62 241.5 193 62.7
Gohir.A04G118800 Gossypium hirsutum HOM05D005520 ORTHO05D006633 7.1e-62 241.1 189 64.6
Gohir.D04G160500 Gossypium hirsutum HOM05D005520 ORTHO05D006633 1.2e-61 240.4 189 64.6
Gorai.012G148200 Gossypium raimondii HOM05D005520 ORTHO05D006633 1.2e-61 240.4 189 64.6
MSTRG.16689 Avicennia marina HOM05D005520 ORTHO05D006633 2.1e-61 239.6 194 62.4
CAN.G689.10 Capsicum annuum HOM05D005520 ORTHO05D006633 2.1e-61 239.6 197 61.4
Psat7g087120 Pisum sativum HOM05D005520 ORTHO05D006633 2.7e-61 239.2 164 71.3
BraA08t32384Z Brassica rapa HOM05D005520 ORTHO05D006633 2.3e-60 236.1 193 61.7
Sc18g0003610 Simmondsia chinensis HOM05D005520 ORTHO05D006633 2.3e-60 236.1 195 61.0
A08p03510 Brassica napus HOM05D005520 ORTHO05D006633 3.0e-60 235.7 193 61.7
EL10Ac8g19365 Beta vulgaris HOM05D005520 ORTHO05D006633 5.1e-60 235.0 194 58.8
COL.COLO4_32538 Corchorus olitorius HOM05D005520 ORTHO05D006633 8.7e-60 234.2 205 58.5
Migut.F01600 Erythranthe guttata HOM05D005520 ORTHO05D006633 8.7e-60 234.2 199 58.8
Solyc11g071960.2 Solanum lycopersicum HOM05D005520 ORTHO05D006633 1.5e-59 233.4 196 60.7
CANSAT25G2379 Cannabis sativa HOM05D005520 ORTHO05D006633 5.6e-59 231.5 187 61.0
Sed0007262 Sechium edule HOM05D005520 ORTHO05D006633 2.1e-58 229.6 197 56.9
RcHm_v2.0_Chr6g0253051 Rosa chinensis HOM05D005520 ORTHO05D006633 3.6e-58 228.8 124 81.5
Nitab4.5_0008364g0030 Nicotiana tabacum HOM05D005520 ORTHO05D006633 4.8e-58 228.4 196 58.2
TAR625G0105 Trochodendron aralioides HOM05D000641 ORTHO05D006633 4.8e-58 228.4 121 83.5
unitig_37.g12800 Utricularia gibba HOM05D005520 ORTHO05D006633 1.1e-57 227.3 194 58.2
Sopen11g029630 Solanum pennellii HOM05D005520 ORTHO05D006633 1.4e-57 226.9 195 58.5
Nitab4.5_0000158g0130 Nicotiana tabacum HOM05D005520 ORTHO05D006633 4.0e-57 225.3 186 60.8
ClCG10G010520 Citrullus lanatus HOM05D005520 ORTHO05D006633 9.0e-57 224.2 193 57.0
Lsat_1_v5_gn_9_112480 Lactuca sativa HOM05D005520 ORTHO05D006633 9.0e-57 224.2 196 57.1
Peaxi162Scf00429g00622 Petunia axillaris HOM05D005520 ORTHO05D006633 9.0e-57 224.2 189 58.2
Lj5A217G90 Lonicera japonica HOM05D005520 ORTHO05D006633 1.2e-56 223.8 123 81.3
SalBow6G1186 Salvia bowleyana HOM05D005520 ORTHO05D006633 1.5e-56 223.4 123 78.9
Psat6g139520 Pisum sativum HOM05D005520 ORTHO05D006633 2.0e-56 223.0 164 67.1
PGSC0003DMG400002983 Solanum tuberosum HOM05D005520 ORTHO05D006633 3.4e-56 222.2 129 76.0
CDE04G3180 Ceratophyllum demersum HOM05D005520 ORTHO05D006633 4.5e-56 221.9 190 54.2
SalBow6G6323 Salvia bowleyana HOM05D005520 ORTHO05D006633 1.7e-55 219.9 225 52.0
SGA_v2.0_scaffold225G43026 Striga asiatica HOM05D005520 ORTHO05D006633 1.7e-55 219.9 119 79.8
HanXRQChr03g0069991 Helianthus annuus HOM05D005520 ORTHO05D006633 2.2e-55 219.5 195 57.4
FAN15G3606 Fragaria x ananassa HOM05D005520 ORTHO05D006633 3.8e-55 218.8 195 59.5
PSO541G2579 Papaver somniferum HOM05D005520 ORTHO05D006633 3.8e-55 218.8 195 53.8
Gohir.D13G044800 Gossypium hirsutum HOM05D005520 ORTHO05D006633 4.9e-55 218.4 187 58.3
Gorai.013G049600 Gossypium raimondii HOM05D005520 ORTHO05D006633 6.4e-55 218.0 187 58.3
ECA240G0181 Erigeron canadensis HOM05D005520 ORTHO05D006633 2.4e-54 216.1 123 75.6
PSO675G3202 Papaver somniferum HOM05D005520 ORTHO05D006633 1.6e-53 213.4 195 53.3
DCAR_021961 Daucus carota HOM05D005520 ORTHO05D006633 6.0e-53 211.5 192 56.2
FAN24G1644 Fragaria x ananassa HOM05D005520 ORTHO05D006633 1.0e-52 210.7 204 56.4
HPP92_023672 Vanilla planifolia HOM05D005520 ORTHO05D006633 2.3e-52 209.5 196 53.6
HPP92_023689 Vanilla planifolia HOM05D005520 ORTHO05D006633 3.9e-52 208.8 196 53.6
Migut.B00427 Erythranthe guttata HOM05D005520 ORTHO05D006633 5.1e-52 208.4 123 73.2
Aa31LG10G4210 Aethionema arabicum HOM05D001821 ORTHO05D006633 3.3e-51 205.7 177 58.8
CDE07G0521 Ceratophyllum demersum HOM05D005520 ORTHO05D006633 4.3e-51 205.3 121 70.2
Migut.B00429 Erythranthe guttata HOM05D005520 ORTHO05D009373 4.3e-51 205.3 176 59.7
Cc02_g19680 Coffea canephora HOM05D005520 ORTHO05D006633 1.3e-50 203.8 258 46.9
BcaB04g17288 Brassica carinata HOM05D005520 ORTHO05D006633 1.6e-50 203.4 203 56.2
Ca_24141_v3 Cicer arietinum L. HOM05D005520 ORTHO05D006633 6.2e-50 201.4 158 67.7
Zm00001eb007440 Zea mays HOM05D005520 ORTHO05D006633 8.1e-50 201.1 124 66.1
RhsimUnG0125400 Rhododendron simsii HOM05D005520 ORTHO05D006633 1.4e-49 200.3 193 57.0
SEGI_34662 Sequoiadendron giganteum HOM05D005520 ORTHO05D006633 3.4e-48 195.7 120 69.2
RcHm_v2.0_Chr6g0253221 Rosa chinensis HOM05D005520 ORTHO05D006633 1.7e-47 193.4 126 73.0
AT1G49880 Arabidopsis thaliana HOM05D005520 ORTHO05D006633 9.3e-46 187.6 161 62.1
Atru.chr5.2403 Acer truncatum HOM05D005520 ORTHO05D006633 1.8e-44 183.3 99 81.8
SMO172G0176 Selaginella moellendorffii HOM05D005520 ORTHO05D006633 3.9e-44 182.2 114 67.5
Oeu009678.2 Olea europaea HOM05D005520 ORTHO05D006633 5.1e-44 181.8 253 44.3
Pp3c2_36820 Physcomitrium patens HOM05D005520 ORTHO05D006633 5.1e-44 181.8 114 69.3
Glyma.15G237900 Glycine max HOM05D005520 ORTHO05D006633 3.3e-43 179.1 121 79.3
Mapoly0036s0053 Marchantia polymorpha HOM05D005520 ORTHO05D006633 9.6e-43 177.6 165 52.7
CBR_g2851 Chara braunii HOM05D005520 ORTHO05D006633 9.0e-41 171.0 113 58.4
vmacro01971 Vaccinium macrocarpon HOM05D005520 ORTHO05D006633 1.1e-38 164.1 128 60.9
CBR_g31027 Chara braunii HOM05D005520 ORTHO05D006633 4.6e-37 158.7 162 46.3
Actinidia27983 Actinidia chinensis HOM05D005520 ORTHO05D006633 3.0e-36 156.0 195 45.6
Pp3c19_18310 Physcomitrium patens HOM05D005520 ORTHO05D006633 1.9e-35 153.3 136 52.2
AUR62022505 Chenopodium quinoa HOM05D005520 ORTHO05D006633 3.3e-35 152.5 177 48.6
Potri.001G296000 Populus trichocarpa HOM05D005520 ORTHO05D006633 1.4e-33 147.1 201 45.3
FvH4_2g03990 Fragaria vesca HOM05D005520 ORTHO05D006633 3.1e-33 146.0 133 60.2
Cre03.g173200 Chlamydomonas reinhardtii HOM05D005520 ORTHO05D006633 4.5e-32 142.1 125 51.2
Medtr0857s0010 Medicago truncatula HOM05D005520 ORTHO05D006633 5.5e-30 135.2 63 92.1
Thecc.02G114500 Theobroma cacao HOM05D005520 ORTHO05D006633 1.6e-29 133.7 139 54.0
Aqoxy6G02716 Aquilegia oxysepala HOM05D005520 ORTHO05D006633 3.0e-28 129.4 155 47.7
CBR_g38847 Chara braunii HOM05D005520 ORTHO05D006633 3.0e-28 129.4 137 43.8
Haze_26784 Corylus avellana HOM05D005520 ORTHO05D006633 2.8e-26 122.9 100 47.0
CSS0022898 Camellia sinensis var. sinensis HOM05D005520 ORTHO05D006633 8.2e-26 121.3 97 55.7
Nn1g07564 Nelumbo nucifera HOM05D005520 ORTHO05D006633 1.8e-25 120.2 138 48.6
PRCOL_00001319 Prasinoderma coloniale HOM05D000442 ORTHO05D001718 2.4e-25 119.8 117 47.9
MCO01G292 Micromonas commoda HOM05D005520 ORTHO05D006633 5.3e-25 118.6 96 52.1
Hund12620 Selenicereus undatus HOM05D005520 ORTHO05D006633 3.4e-24 115.9 262 32.8
Ciclev10029975m.g Citrus clementina HOM05D005520 ORTHO05D006633 3.8e-23 112.5 58 82.8
TPR.G17607 Trifolium pratense HOM05D005520 ORTHO05D006633 3.8e-23 112.5 95 65.3
Cre14.g633000 Chlamydomonas reinhardtii HOM05D005520 ORTHO05D006633 1.9e-22 110.2 107 44.9
Aqoxy6G02727 Aquilegia oxysepala HOM05D005520 ORTHO05D006633 4.2e-22 109.0 58 77.6
MCO01G319 Micromonas commoda HOM05D005520 ORTHO05D006633 1.7e-18 97.1 104 45.2
Cfa024926 Carpinus fangiana HOM05D000137 ORTHO05D122446 4.8e-18 95.5 119 37.0
MELO3C017991.2 Cucumis melo HOM05D005520 ORTHO05D006633 1.0e-15 87.8 115 47.0
SHI05087 Sapria himalayana HOM05D005520 ORTHO05D006633 9.4e-14 81.3 74 50.0
ATR0165G041 Amborella trichopoda HOM05D005520 ORTHO05D006633 6.7e-12 75.1 118 44.9
AL1G58430 Arabidopsis lyrata HOM05D005520 ORTHO05D006633 3.3e-11 72.8 119 40.3
CsaV3_4G000440 Cucumis sativus L. HOM05D005520 ORTHO05D006633 1.1e-09 67.8 112 41.1
Os03g0206300 Oryza sativa ssp. japonica HOM05D005520 ORTHO05D006633 1.1e-09 67.8 46 63.0
A06p03510 Brassica napus HOM05D005520 ORTHO05D006633 9.1e-09 64.7 35 74.3
BraA06t23559Z Brassica rapa HOM05D005520 ORTHO05D006633 9.1e-09 64.7 35 74.3
SHI05088 Sapria himalayana HOM05D005520 ORTHO05D006633 2.5e-06 56.6 120 40.0


User provided reference genes

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