Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G265000 Phaseolus vulgaris HOM05D006562 ORTHO05D008230 0.0e+00 1146.0 610 100.0
VMungo0251G0646 Vigna mungo HOM05D006562 ORTHO05D008230 1.3e-300 1035.8 615 89.4
Glyma.16G124500 Glycine max HOM05D006562 ORTHO05D008230 4.4e-280 967.6 615 84.1
Lj4g0007150 Lotus japonicus HOM05D006562 ORTHO05D008230 6.0e-253 877.5 616 73.5
TPR.G19508 Trifolium pratense HOM05D006562 ORTHO05D008230 2.4e-249 865.5 614 74.8
Medtr8g075250 Medicago truncatula HOM05D006562 ORTHO05D008230 3.4e-248 861.7 618 75.6
Ca_03628_v3 Cicer arietinum L. HOM05D006562 ORTHO05D008230 6.5e-247 857.4 635 70.2
Psat4g101960 Pisum sativum HOM05D006562 ORTHO05D008230 2.7e-245 852.0 616 73.2
Lalb_Chr16g0391391 Lupinus albus HOM05D006562 ORTHO05D008230 6.1e-237 824.3 616 69.6
arahy.Tifrunner.gnm1.ann1.X2JQ1G Arachis hypogaea HOM05D006562 ORTHO05D008230 7.2e-230 800.8 616 68.7
arahy.Tifrunner.gnm1.ann1.6MN492 Arachis hypogaea HOM05D006562 ORTHO05D008230 3.3e-227 792.0 616 68.5
Cfa007000 Carpinus fangiana HOM05D006562 ORTHO05D008230 6.6e-191 671.4 569 61.9
QL06p051072 Quercus lobata HOM05D006562 ORTHO05D008230 3.3e-190 669.1 628 59.1
CiPaw.07G060900 Carya illinoinensis HOM05D006562 ORTHO05D008230 2.6e-187 659.4 571 60.6
Potri.005G111000 Populus trichocarpa HOM05D006562 ORTHO05D008230 3.7e-186 655.6 573 61.1
GSVIVG01018736001 Vitis vinifera HOM05D006562 ORTHO05D008230 3.2e-185 652.5 572 61.0
Haze_03732 Corylus avellana HOM05D006562 ORTHO05D008230 5.4e-185 651.7 605 57.9
MD15G1242700 Malus domestica HOM05D006562 ORTHO05D008230 1.9e-182 643.3 570 60.5
RcHm_v2.0_Chr2g0099051 Rosa chinensis HOM05D006562 ORTHO05D008230 8.1e-181 637.9 630 57.3
TWI53G1373 Tripterygium wilfordii HOM05D006562 ORTHO05D008230 8.1e-181 637.9 568 60.0
Sabra05G0091000 Salix brachista HOM05D006562 ORTHO05D008230 2.0e-179 633.3 592 58.8
Manes.01G148500 Manihot esculenta HOM05D006562 ORTHO05D008230 9.9e-179 630.9 629 54.8
CANSAT25G3480 Cannabis sativa HOM05D006562 ORTHO05D008230 1.7e-178 630.2 570 59.5
Lj2A480G48 Lonicera japonica HOM05D006562 ORTHO05D008230 4.9e-178 628.6 621 55.4
Thecc.01G014800 Theobroma cacao HOM05D006562 ORTHO05D008230 6.4e-178 628.2 570 58.6
TAR376G1060 Trochodendron aralioides HOM05D006562 ORTHO05D008230 1.4e-177 627.1 581 58.0
FAN28G2818 Fragaria x ananassa HOM05D006562 ORTHO05D008230 1.9e-177 626.7 572 60.5
Sed0025600 Sechium edule HOM05D006562 ORTHO05D008230 5.4e-177 625.2 571 56.9
Dinv33663 Davidia involucrata HOM05D006562 ORTHO05D008230 3.5e-176 622.5 570 59.6
FvH4_1g11470 Fragaria vesca HOM05D006562 ORTHO05D008230 1.3e-175 620.5 576 59.9
COL.COLO4_22460 Corchorus olitorius HOM05D006562 ORTHO05D008230 5.1e-175 618.6 572 57.9
Gohir.D10G089300 Gossypium hirsutum HOM05D006562 ORTHO05D008230 1.5e-174 617.1 574 58.0
Gorai.011G098200 Gossypium raimondii HOM05D006562 ORTHO05D008230 1.6e-173 613.6 574 58.0
Gohir.A10G098700 Gossypium hirsutum HOM05D006562 ORTHO05D008230 3.6e-173 612.5 573 58.1
FAN23G1005 Fragaria x ananassa HOM05D006562 ORTHO05D008230 1.8e-172 610.1 555 60.5
FAN19G2077 Fragaria x ananassa HOM05D006562 ORTHO05D008230 8.9e-172 607.8 540 60.9
Atru.chr3.853 Acer truncatum HOM05D006562 ORTHO05D008230 2.0e-171 606.7 604 54.1
Actinidia22955 Actinidia chinensis HOM05D006562 ORTHO05D008230 4.4e-171 605.5 568 56.3
Cpa.g.sc6.285 Carica papaya HOM05D006562 ORTHO05D008230 5.8e-171 605.1 651 53.5
Eucgr.I02333 Eucalyptus grandis HOM05D006562 ORTHO05D008230 1.7e-167 593.6 569 56.9
CsaV3_6G047340 Cucumis sativus L. HOM05D006562 ORTHO05D008230 3.9e-167 592.4 567 54.3
ClCG01G020460 Citrullus lanatus HOM05D006562 ORTHO05D008230 1.5e-166 590.5 592 53.9
vmacro22192 Vaccinium macrocarpon HOM05D006562 ORTHO05D008230 3.3e-166 589.3 569 56.4
vmacro22151 Vaccinium macrocarpon HOM05D006562 ORTHO05D008230 4.3e-166 589.0 569 56.2
CSS0025685 Camellia sinensis var. sinensis HOM05D006562 ORTHO05D008230 7.3e-166 588.2 570 55.3
HanXRQChr15g0483891 Helianthus annuus HOM05D006562 ORTHO05D008230 9.9e-163 577.8 570 53.7
Sc16g0001970 Simmondsia chinensis HOM05D006562 ORTHO05D008230 1.1e-161 574.3 562 55.2
Duzib187G1447 Durio zibethinus HOM05D006562 ORTHO05D008230 2.3e-159 566.6 572 54.9
DCAR_014038 Daucus carota HOM05D006562 ORTHO05D008230 6.6e-159 565.1 527 56.4
AL8G45460 Arabidopsis lyrata HOM05D006562 ORTHO05D008230 1.9e-158 563.5 564 54.8
AT5G66130 Arabidopsis thaliana HOM05D006562 ORTHO05D008230 9.6e-158 561.2 568 53.7
Lsat_1_v5_gn_3_72080 Lactuca sativa HOM05D006562 ORTHO05D008230 2.8e-157 559.7 572 53.3
Nitab4.5_0001892g0110 Nicotiana tabacum HOM05D006562 ORTHO05D008230 1.8e-156 557.0 559 53.5
PGR119G1624 Punica granatum HOM05D006562 ORTHO05D008230 3.1e-156 556.2 629 49.3
Thhalv10003881m.g Eutrema salsugineum HOM05D006562 ORTHO05D008230 6.9e-156 555.1 568 52.6
Carub.0008s2836 Capsella rubella HOM05D006562 ORTHO05D008230 9.0e-156 554.7 576 53.0
CARHR281620 Cardamine hirsuta HOM05D006562 ORTHO05D008230 9.0e-156 554.7 569 52.0
Prupe.7G171500 Prunus persica HOM05D006562 ORTHO05D008230 1.5e-155 553.9 469 62.5
Cc07_g11050 Coffea canephora HOM05D006562 ORTHO05D008230 2.6e-155 553.1 549 54.1
MBI05_g23389_MAGBIO Magnolia biondii HOM05D006562 ORTHO05D008230 2.2e-154 550.1 553 55.3
AUR62003339 Chenopodium quinoa HOM05D006562 ORTHO05D008230 4.9e-154 548.9 572 51.7
Sp2g30560 Schrenkiella parvula HOM05D006562 ORTHO05D008230 4.9e-154 548.9 571 52.7
Oeu048479.1 Olea europaea HOM05D006562 ORTHO05D008230 1.4e-153 547.4 568 53.7
Aqoxy5G01815 Aquilegia oxysepala HOM05D006562 ORTHO05D008230 2.4e-153 546.6 569 52.5
Ciclev10025220m.g Citrus clementina HOM05D006562 ORTHO05D008230 4.2e-153 545.8 533 54.0
Migut.L00910 Erythranthe guttata HOM05D006562 ORTHO05D008230 3.9e-151 539.3 615 49.6
SalBow5G1234 Salvia bowleyana HOM05D006562 ORTHO05D008230 8.7e-151 538.1 555 52.3
BcaC04g23114 Brassica carinata HOM05D006562 ORTHO05D008230 1.5e-150 537.3 566 52.5
Sopen02g028380 Solanum pennellii HOM05D006562 ORTHO05D008230 1.5e-150 537.3 553 52.8
AUR62029498 Chenopodium quinoa HOM05D006562 ORTHO05D008230 2.1e-149 533.5 551 51.5
Solyc02g083600.4 Solanum lycopersicum HOM05D006562 ORTHO05D008230 3.7e-149 532.7 553 52.4
Nitab4.5_0003187g0030 Nicotiana tabacum HOM05D006562 ORTHO05D008230 4.8e-149 532.3 557 51.2
EL10Ac6g15524 Beta vulgaris HOM05D006562 ORTHO05D008230 1.4e-148 530.8 631 48.2
BcaB04g20123 Brassica carinata HOM05D006562 ORTHO05D008230 5.3e-148 528.9 568 51.4
SGA_v2.0_scaffold229G43296 Striga asiatica HOM05D006562 ORTHO05D008230 6.9e-148 528.5 546 52.0
MELO3C007925.2 Cucumis melo HOM05D006562 ORTHO05D008230 1.5e-147 527.3 638 46.9
PGSC0003DMG400003647 Solanum tuberosum HOM05D006562 ORTHO05D008230 2.0e-147 526.9 520 54.0
BraA09t36658Z Brassica rapa HOM05D006562 ORTHO05D008230 2.6e-147 526.6 576 51.6
Aa31LG1G14620 Aethionema arabicum HOM05D006562 ORTHO05D008230 7.1e-145 518.5 516 54.5
BolC9t54092H Brassica oleracea HOM05D006562 ORTHO05D008230 7.1e-145 518.5 569 51.3
C09p12020 Brassica napus HOM05D006562 ORTHO05D008230 3.5e-144 516.2 566 51.6
A09p10140 Brassica napus HOM05D006562 ORTHO05D008230 2.3e-143 513.5 524 54.4
CAN.G1274.29 Capsicum annuum HOM05D006562 ORTHO05D008230 3.9e-143 512.7 542 51.3
Peaxi162Scf00328g00616 Petunia axillaris HOM05D006562 ORTHO05D008230 3.3e-142 509.6 587 49.4
unitig_37.g12438 Utricularia gibba HOM05D006562 ORTHO05D008230 8.4e-138 495.0 565 49.6
Ah.03g149120 Amaranthus hybridus HOM05D006562 ORTHO05D008230 1.9e-137 493.8 561 48.3
PSO700G0294 Papaver somniferum HOM05D006562 ORTHO05D008230 2.5e-137 493.4 558 48.9
PSO170G3776 Papaver somniferum HOM05D006562 ORTHO05D008230 2.7e-136 490.0 566 49.1
ATR0712G114 Amborella trichopoda HOM05D006562 ORTHO05D008230 8.7e-135 485.0 599 48.1
MSTRG.15581 Avicennia marina HOM05D006562 ORTHO05D008230 1.3e-133 481.1 495 52.7
Rhsim10G0209300 Rhododendron simsii HOM05D006562 ORTHO05D008230 4.1e-132 476.1 547 48.6
Hund16502 Selenicereus undatus HOM05D006562 ORTHO05D008230 5.0e-130 469.2 420 57.6
ECA246G3730 Erigeron canadensis HOM05D006562 ORTHO05D008230 2.1e-128 463.8 567 47.4
HPP92_022171 Vanilla planifolia HOM05D006562 ORTHO05D008230 4.6e-128 462.6 562 47.5
Os03g0242100 Oryza sativa ssp. japonica HOM05D006562 ORTHO05D008230 1.4e-127 461.1 562 46.1
Zm00001eb398900 Zea mays HOM05D006562 ORTHO05D008230 4.1e-116 422.9 483 47.6
SHI08537 Sapria himalayana HOM05D006562 ORTHO05D008230 5.9e-115 419.1 396 53.0
HPP92_022170 Vanilla planifolia HOM05D006562 ORTHO05D008230 2.7e-91 340.5 454 46.0
SMO329G0081 Selaginella moellendorffii HOM05D006562 ORTHO05D008230 1.5e-89 334.7 491 39.1
Pp3c8_14180 Physcomitrium patens HOM05D006562 ORTHO05D008230 1.6e-88 331.3 454 41.6
Mapoly0004s0213 Marchantia polymorpha HOM05D006562 ORTHO05D008230 6.8e-79 299.3 577 35.7
CDE02G3565 Ceratophyllum demersum HOM05D006562 ORTHO05D008230 5.8e-78 296.2 560 35.2
Dinv33664 Davidia involucrata HOM05D006562 ORTHO05D008230 1.1e-63 248.8 285 53.3
SEGI_24182 Sequoiadendron giganteum HOM05D006562 ORTHO05D008230 8.9e-55 219.2 320 38.8
FAN26G2549 Fragaria x ananassa HOM05D006562 ORTHO05D008230 9.6e-49 199.1 205 54.6
MCO01G428 Micromonas commoda HOM05D006562 ORTHO05D008230 2.0e-46 191.4 568 27.6
Hma1.2p1_0315F.1_g122300 Hydrangea macrophylla HOM05D006562 ORTHO05D008230 3.5e-43 180.6 193 53.4
PRCOL_00000425 Prasinoderma coloniale HOM05D006562 ORTHO05D008230 2.5e-33 147.9 425 28.2
Cre03.g196600 Chlamydomonas reinhardtii HOM05D006562 ORTHO05D008230 1.1e-31 142.5 661 23.3
CBR_g51010 Chara braunii HOM05D006562 ORTHO05D008230 1.5e-25 122.1 369 30.4
Lsat_1_v5_gn_5_17820 Lactuca sativa HOM05D002511 ORTHO05D019442 2.1e-24 118.2 98 58.2
Hund31353 Selenicereus undatus HOM05D006562 ORTHO05D008230 4.6e-19 100.5 104 51.9
Hund31354 Selenicereus undatus HOM05D006562 ORTHO05D008230 4.6e-19 100.5 104 51.9
Hund31048 Selenicereus undatus HOM05D006562 ORTHO05D008230 7.9e-19 99.8 104 51.9
Hund31049 Selenicereus undatus HOM05D006562 ORTHO05D008230 7.9e-19 99.8 104 51.9
Sopen10g019740 Solanum pennellii HOM05D006562 ORTHO05D008230 3.1e-15 87.8 68 61.8
SEGI_14672 Sequoiadendron giganteum HOM05D006562 ORTHO05D008230 5.5e-12 77.0 117 35.9
THA.LOC104800207 Tarenaya hassleriana HOM05D001470 ORTHO05D006756 1.8e-07 62.0 283 22.3
SEGI_11240 Sequoiadendron giganteum HOM05D001470 ORTHO05D006756 4.1e-07 60.8 267 23.6
Psat5g086560 Pisum sativum HOM05D001470 ORTHO05D006756 6.9e-07 60.1 306 22.2
CARHR071130 Cardamine hirsuta HOM05D004094 ORTHO05D004601 9.1e-07 59.7 321 23.7
Lsat_1_v5_gn_5_12680 Lactuca sativa HOM05D004664 ORTHO05D005526 9.1e-07 59.7 66 53.0
Carub.0002s2451 Capsella rubella HOM05D004094 ORTHO05D004601 2.0e-06 58.5 304 24.0
Actinidia17422 Actinidia chinensis HOM05D006562 ORTHO05D008230 2.6e-06 58.2 200 29.5
CBR_g49986 Chara braunii HOM05D001470 ORTHO05D006430 3.4e-06 57.8 242 24.4
Medtr3g088120 Medicago truncatula HOM05D001470 ORTHO05D006756 4.5e-06 57.4 297 22.2


User provided reference genes

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