Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G264800 Phaseolus vulgaris HOM05D007446 ORTHO05D009376 6.9e-44 180.3 91 100.0
Glyma.16G124800 Glycine max HOM05D007446 ORTHO05D009376 1.1e-30 136.3 91 80.2
Lj4g0002006 Lotus japonicus HOM05D007446 ORTHO05D009376 8.2e-29 130.2 87 74.7
Lalb_Chr05g0229761 Lupinus albus HOM05D007446 ORTHO05D009376 1.2e-27 126.3 86 73.3
TWI09G0145 Tripterygium wilfordii HOM05D007446 ORTHO05D009376 3.4e-27 124.8 87 72.4
ClCG01G020420 Citrullus lanatus HOM05D007446 ORTHO05D009376 7.6e-27 123.6 87 71.3
TWI73G1016 Tripterygium wilfordii HOM05D007446 ORTHO05D009376 7.6e-27 123.6 87 70.1
Manes.02G106000 Manihot esculenta HOM05D007446 ORTHO05D009376 1.0e-26 123.2 87 71.3
Potri.005G111900 Populus trichocarpa HOM05D007446 ORTHO05D009376 1.3e-26 122.9 87 72.4
GSVIVG01018747001 Vitis vinifera HOM05D007446 ORTHO05D009376 1.3e-26 122.9 84 72.6
CiPaw.08G130000 Carya illinoinensis HOM05D007446 ORTHO05D009376 1.7e-26 122.5 87 73.6
Actinidia17426 Actinidia chinensis HOM05D007446 ORTHO05D009376 2.2e-26 122.1 87 72.4
AUR62003348 Chenopodium quinoa HOM05D007446 ORTHO05D009376 2.2e-26 122.1 87 72.4
vmacro22147 Vaccinium macrocarpon HOM05D007446 ORTHO05D009376 2.9e-26 121.7 86 72.1
Sabra05G0091700 Salix brachista HOM05D007446 ORTHO05D009376 3.8e-26 121.3 87 72.4
Atru.chr3.842 Acer truncatum HOM05D007446 ORTHO05D009376 4.9e-26 120.9 87 69.0
AUR62029488 Chenopodium quinoa HOM05D007446 ORTHO05D009376 6.5e-26 120.6 87 71.3
AUR62043833 Chenopodium quinoa HOM05D007446 ORTHO05D009376 6.5e-26 120.6 87 71.3
Hund14058 Selenicereus undatus HOM05D007446 ORTHO05D009376 6.5e-26 120.6 87 69.0
Dinv40111 Davidia involucrata HOM05D007446 ORTHO05D009376 8.4e-26 120.2 79 74.7
Rhsim10G0209600 Rhododendron simsii HOM05D007446 ORTHO05D009376 8.4e-26 120.2 87 71.3
CSS0009543 Camellia sinensis var. sinensis HOM05D007446 ORTHO05D009376 1.1e-25 119.8 87 72.4
Cfa006995 Carpinus fangiana HOM05D007446 ORTHO05D009376 1.1e-25 119.8 83 71.1
CsaV3_6G047300 Cucumis sativus L. HOM05D007446 ORTHO05D009376 1.4e-25 119.4 83 71.1
Hma1.2p1_0869F.1_g230750 Hydrangea macrophylla HOM05D007446 ORTHO05D009376 1.4e-25 119.4 83 71.1
Haze_03737 Corylus avellana HOM05D007446 ORTHO05D009376 1.9e-25 119.0 83 69.9
arahy.Tifrunner.gnm1.ann1.786IJB Arachis hypogaea HOM05D007446 ORTHO05D009376 2.5e-25 118.6 83 73.5
arahy.Tifrunner.gnm1.ann1.RW313X Arachis hypogaea HOM05D007446 ORTHO05D009376 2.5e-25 118.6 83 73.5
Prupe.7G170900 Prunus persica HOM05D007446 ORTHO05D009376 3.2e-25 118.2 84 69.0
Cc07_g11000 Coffea canephora HOM05D007446 ORTHO05D009376 4.2e-25 117.9 87 64.4
BraA01t00259Z Brassica rapa HOM05D007446 ORTHO05D009376 7.1e-25 117.1 88 68.2
EL10Ac6g15495 Beta vulgaris HOM05D007446 ORTHO05D009376 9.3e-25 116.7 87 69.0
Carub.0007s0425 Capsella rubella HOM05D007446 ORTHO05D009376 9.3e-25 116.7 88 69.3
Ciclev10026855m.g Citrus clementina HOM05D007446 ORTHO05D009376 9.3e-25 116.7 86 64.0
HanXRQChr09g0256761 Helianthus annuus HOM05D007446 ORTHO05D009376 9.3e-25 116.7 86 67.4
Cpa.g.sc6.279 Carica papaya HOM05D007446 ORTHO05D009376 1.2e-24 116.3 86 69.8
QL06p051006 Quercus lobata HOM05D007446 ORTHO05D009376 1.6e-24 115.9 81 71.6
Aa31LG6G12930 Aethionema arabicum HOM05D007446 ORTHO05D009376 2.7e-24 115.2 88 68.2
MD02G1128000 Malus domestica HOM05D007446 ORTHO05D009376 2.7e-24 115.2 84 66.7
AL7G15070 Arabidopsis lyrata HOM05D007446 ORTHO05D009376 3.5e-24 114.8 87 69.0
Ah.03g149050 Amaranthus hybridus HOM05D007446 ORTHO05D009376 4.6e-24 114.4 87 67.8
AT4G35980 Arabidopsis thaliana HOM05D007446 ORTHO05D009376 4.6e-24 114.4 86 67.4
A01p02730 Brassica napus HOM05D007446 ORTHO05D009376 4.6e-24 114.4 88 67.0
BolC1t00289H Brassica oleracea HOM05D007446 ORTHO05D009376 4.6e-24 114.4 88 67.0
Gohir.D11G181100 Gossypium hirsutum HOM05D007446 ORTHO05D009376 6.0e-24 114.0 79 72.2
Gorai.007G193000 Gossypium raimondii HOM05D007446 ORTHO05D009376 6.0e-24 114.0 79 72.2
BcaNung00774 Brassica carinata HOM05D007446 ORTHO05D009376 7.9e-24 113.6 88 67.0
Sp7g33750 Schrenkiella parvula HOM05D007446 ORTHO05D009376 7.9e-24 113.6 88 67.0
Thecc.01G015400 Theobroma cacao HOM05D007446 ORTHO05D009376 7.9e-24 113.6 86 66.3
FvH4_1g11510 Fragaria vesca HOM05D007446 ORTHO05D009376 1.0e-23 113.2 84 66.7
RcHm_v2.0_Chr2g0099131 Rosa chinensis HOM05D007446 ORTHO05D009376 1.0e-23 113.2 84 66.7
SalBow3G1068 Salvia bowleyana HOM05D007446 ORTHO05D009376 1.0e-23 113.2 86 66.3
C01p03030 Brassica napus HOM05D007446 ORTHO05D009376 1.3e-23 112.8 88 65.9
Duzib264G0432 Durio zibethinus HOM05D007446 ORTHO05D009376 1.3e-23 112.8 79 72.2
Eucgr.J02461 Eucalyptus grandis HOM05D007446 ORTHO05D009376 1.3e-23 112.8 87 67.8
Thhalv10026680m.g Eutrema salsugineum HOM05D007446 ORTHO05D009376 1.3e-23 112.8 88 65.9
THA.LOC104804270 Tarenaya hassleriana HOM05D007446 ORTHO05D009376 2.3e-23 112.1 88 65.9
CAN.G1274.24 Capsicum annuum HOM05D007446 ORTHO05D009376 3.9e-23 111.3 84 66.7
ECA232G4023 Erigeron canadensis HOM05D007446 ORTHO05D009376 3.9e-23 111.3 86 66.3
PGR119G1403 Punica granatum HOM05D007446 ORTHO05D009376 1.1e-22 109.8 87 64.4
FAN26G2670 Fragaria x ananassa HOM05D007446 ORTHO05D009376 1.9e-22 109.0 80 66.2
CANSAT25G1207 Cannabis sativa HOM05D007446 ORTHO05D009376 3.3e-22 108.2 90 63.3
CAN.G1817.7 Capsicum annuum HOM05D007446 ORTHO05D009376 3.3e-22 108.2 86 61.6
FAN23G0535 Fragaria x ananassa HOM05D000971 ORTHO05D000901 3.3e-22 108.2 83 63.9
Sopen02g028430 Solanum pennellii HOM05D007446 ORTHO05D009376 3.3e-22 108.2 84 64.3
PGSC0003DMG400003579 Solanum tuberosum HOM05D007446 ORTHO05D009376 4.3e-22 107.8 84 64.3
Psat4g101880 Pisum sativum HOM05D007446 ORTHO05D009376 7.4e-22 107.1 87 63.2
Medtr8g075290 Medicago truncatula HOM05D007446 ORTHO05D009376 1.6e-21 105.9 88 62.5
Peaxi162Scf00328g00716 Petunia axillaris HOM05D007446 ORTHO05D009376 3.7e-21 104.8 84 63.1
Solyc02g083650.3 Solanum lycopersicum HOM05D007446 ORTHO05D009376 3.7e-21 104.8 84 63.1
TPR.G19502 Trifolium pratense HOM05D007446 ORTHO05D009376 3.7e-21 104.8 88 63.6
Psat4g101720 Pisum sativum HOM05D007446 ORTHO05D009376 8.2e-21 103.6 87 62.1
MELO3C007921.2 Cucumis melo HOM05D007446 ORTHO05D009376 3.1e-20 101.7 71 70.4
Migut.H02175 Erythranthe guttata HOM05D007446 ORTHO05D009376 6.9e-20 100.5 86 64.0
Nn7g37082 Nelumbo nucifera HOM05D007446 ORTHO05D009376 9.0e-20 100.1 86 60.5
SGA_v2.0_scaffold74G24537 Striga asiatica HOM05D007446 ORTHO05D009376 2.6e-19 98.6 82 62.2
Sed0007439 Sechium edule HOM05D007446 ORTHO05D009376 5.9e-19 97.4 71 69.0
TPR.G25793 Trifolium pratense HOM05D000002 ORTHO05D000001 7.6e-19 97.1 82 62.2
Lsat_1_v5_gn_4_145721 Lactuca sativa HOM05D007446 ORTHO05D009376 1.0e-18 96.7 84 60.7
THA.LOC109115992 Tarenaya hassleriana HOM05D007446 ORTHO05D009376 2.2e-18 95.5 81 61.7
TAR636G2489 Trochodendron aralioides HOM05D007446 ORTHO05D009376 5.0e-18 94.4 84 58.3
FAN19G2392 Fragaria x ananassa HOM05D000971 ORTHO05D000901 8.5e-18 93.6 72 63.9
FAN28G0109 Fragaria x ananassa HOM05D000971 ORTHO05D000901 1.1e-17 93.2 74 62.2
unitig_899.g14718 Utricularia gibba HOM05D007446 ORTHO05D009376 1.9e-17 92.4 81 64.2
DCAR_023140 Daucus carota HOM05D000372 ORTHO05D004502 7.2e-17 90.5 82 59.8
Nitab4.5_0001658g0040 Nicotiana tabacum HOM05D007446 ORTHO05D009376 1.2e-16 89.7 68 64.7
Oeu007438.1 Olea europaea HOM05D007446 ORTHO05D009376 2.1e-16 89.0 63 71.4
Nitab4.5_0001892g0060 Nicotiana tabacum HOM05D007446 ORTHO05D009376 4.6e-16 87.8 68 63.2
Os05g0352800 Oryza sativa ssp. japonica HOM05D007446 ORTHO05D009376 4.6e-16 87.8 74 62.2
Glyma.02G046300 Glycine max HOM05D007446 ORTHO05D009376 7.9e-16 87.0 61 77.0
Oeu054756.1 Olea europaea HOM05D007446 ORTHO05D009376 1.8e-15 85.9 61 70.5
Sc07g0001100 Simmondsia chinensis HOM05D007446 ORTHO05D009376 1.8e-15 85.9 71 59.2
Sc07g0001150 Simmondsia chinensis HOM05D007446 ORTHO05D009376 1.8e-15 85.9 71 60.6
MD15G1243200 Malus domestica HOM05D007446 ORTHO05D009376 2.3e-15 85.5 60 66.7
Gorai.007G317400 Gossypium raimondii HOM05D007446 ORTHO05D009376 3.9e-15 84.7 75 61.3
Gohir.D11G294266 Gossypium hirsutum HOM05D007446 ORTHO05D009376 8.8e-15 83.6 76 59.2
DCAR_011601 Daucus carota HOM05D007446 ORTHO05D009376 5.7e-14 80.9 82 54.9
Gohir.A11G174000 Gossypium hirsutum HOM05D007446 ORTHO05D009376 1.3e-13 79.7 55 70.9
ATR0681G038 Amborella trichopoda HOM05D007446 ORTHO05D009376 8.2e-13 77.0 75 54.7
HPP92_012021 Vanilla planifolia HOM05D007446 ORTHO05D009376 2.4e-12 75.5 82 50.0
Pp3c23_18910 Physcomitrium patens HOM05D007446 ORTHO05D009376 1.2e-11 73.2 79 46.8
PGSC0003DMG400022557 Solanum tuberosum HOM05D007446 ORTHO05D009376 2.2e-10 68.9 63 58.7
Actinidia22956 Actinidia chinensis HOM05D007446 ORTHO05D009376 1.4e-09 66.2 44 79.5
Psat0s2733g0120 Pisum sativum HOM05D007446 ORTHO05D009376 4.2e-09 64.7 85 45.9
SalBow3G4512 Salvia bowleyana HOM05D007446 ORTHO05D009376 9.4e-09 63.5 58 55.2
Mapoly0007s0006 Marchantia polymorpha HOM05D007446 ORTHO05D009376 1.2e-08 63.2 74 45.9
Zm00001eb428230 Zea mays HOM05D007446 ORTHO05D009376 6.7e-07 57.4 57 54.4
AagrBONN_evm.TU.Sc2ySwM_228.3577 Anthoceros agrestis HOM05D007446 ORTHO05D009376 1.1e-06 56.6 61 41.0


User provided reference genes

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