Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G264100 Phaseolus vulgaris HOM05D006825 ORTHO05D008510 1.9e-192 675.6 326 100.0
VMungo0251G0870 Vigna mungo HOM05D006825 ORTHO05D008510 2.5e-168 595.5 306 93.1
Glyma.02G047100 Glycine max HOM05D006825 ORTHO05D008510 1.9e-157 559.3 306 86.6
Lj4g0003754 Lotus japonicus HOM05D006825 ORTHO05D008510 1.9e-157 559.3 303 85.8
Ca_22387_v3 Cicer arietinum L. HOM05D006825 ORTHO05D008510 4.5e-146 521.5 303 79.2
arahy.Tifrunner.gnm1.ann1.JPTZ14 Arachis hypogaea HOM05D006825 ORTHO05D008510 5.9e-146 521.2 299 81.3
Lalb_Chr05g0229811 Lupinus albus HOM05D006825 ORTHO05D008510 1.8e-142 509.6 302 79.1
Medtr8g075430 Medicago truncatula HOM05D006825 ORTHO05D008510 1.7e-140 503.1 301 79.4
arahy.Tifrunner.gnm1.ann1.89Z5DT Arachis hypogaea HOM05D006825 ORTHO05D008510 1.6e-138 496.5 289 79.9
Thecc.01G016500 Theobroma cacao HOM05D006825 ORTHO05D008510 1.8e-131 473.0 306 72.2
CSS0032071 Camellia sinensis var. sinensis HOM05D006825 ORTHO05D008510 1.0e-129 467.2 309 71.5
CSS0030622 Camellia sinensis var. sinensis HOM05D006825 ORTHO05D008510 8.5e-129 464.2 309 71.5
QL06p050789 Quercus lobata HOM05D006825 ORTHO05D008510 1.9e-128 463.0 306 70.9
Potri.007G056800 Populus trichocarpa HOM05D006825 ORTHO05D008510 3.2e-128 462.2 306 69.9
Dinv33645 Davidia involucrata HOM05D006825 ORTHO05D008510 5.5e-128 461.5 308 70.8
Haze_03748 Corylus avellana HOM05D006825 ORTHO05D008510 2.7e-127 459.1 305 70.2
Duzib147G0784 Durio zibethinus HOM05D006825 ORTHO05D008510 2.7e-127 459.1 306 70.6
Sabra07G0048700 Salix brachista HOM05D006825 ORTHO05D008510 2.7e-127 459.1 306 69.9
Gohir.A02G171400 Gossypium hirsutum HOM05D006825 ORTHO05D008510 1.0e-126 457.2 306 70.9
Lj4A220T100 Lonicera japonica HOM05D006825 ORTHO05D008510 4.0e-126 455.3 300 71.7
Gohir.D03G008700 Gossypium hirsutum HOM05D006825 ORTHO05D008510 8.8e-126 454.1 306 70.6
Prupe.7G169900 Prunus persica HOM05D006825 ORTHO05D008510 8.8e-126 454.1 304 70.7
Hund14052 Selenicereus undatus HOM05D006825 ORTHO05D008510 1.2e-125 453.8 307 70.0
TAR626G0952 Trochodendron aralioides HOM05D006825 ORTHO05D008510 1.2e-125 453.8 308 70.8
Gorai.003G008900 Gossypium raimondii HOM05D006825 ORTHO05D008510 4.4e-125 451.8 306 69.9
Lsat_1_v5_gn_4_145960 Lactuca sativa HOM05D006825 ORTHO05D008510 4.4e-125 451.8 298 71.8
Cfa006985 Carpinus fangiana HOM05D000348 ORTHO05D000244 9.8e-125 450.7 305 70.2
CANSAT25G1468 Cannabis sativa HOM05D006825 ORTHO05D008510 2.2e-124 449.5 304 70.4
FvH4_1g11660 Fragaria vesca HOM05D006825 ORTHO05D008510 4.8e-124 448.4 310 71.6
FAN19G1602 Fragaria x ananassa HOM05D006825 ORTHO05D008510 6.3e-124 448.0 311 71.4
FAN28G2055 Fragaria x ananassa HOM05D006825 ORTHO05D008510 1.1e-123 447.2 310 71.9
DCAR_021509 Daucus carota HOM05D006825 ORTHO05D008510 1.4e-123 446.8 309 68.6
RcHm_v2.0_Chr2g0099251 Rosa chinensis HOM05D006825 ORTHO05D008510 3.1e-123 445.7 306 70.9
MD02G1129700 Malus domestica HOM05D006825 ORTHO05D008510 5.4e-123 444.9 309 71.2
MD15G1244000 Malus domestica HOM05D006825 ORTHO05D008510 5.4e-123 444.9 306 70.9
FAN26G0347 Fragaria x ananassa HOM05D006825 ORTHO05D008510 7.0e-123 444.5 320 69.4
Rhsim10G0211100 Rhododendron simsii HOM05D006825 ORTHO05D008510 4.5e-122 441.8 309 67.6
CiPaw.08G130700 Carya illinoinensis HOM05D006825 ORTHO05D008510 5.9e-122 441.4 306 67.6
Ciclev10025798m.g Citrus clementina HOM05D006825 ORTHO05D008510 1.3e-121 440.3 306 67.6
HanXRQChr09g0256941 Helianthus annuus HOM05D006825 ORTHO05D008510 5.0e-121 438.3 304 68.1
AUR62003356 Chenopodium quinoa HOM05D006825 ORTHO05D008510 6.5e-121 438.0 300 70.0
EL10Ac6g15487 Beta vulgaris HOM05D006825 ORTHO05D008510 2.5e-120 436.0 300 69.3
Cc07_g10910 Coffea canephora HOM05D006825 ORTHO05D008510 2.5e-120 436.0 310 67.4
AUR62029480 Chenopodium quinoa HOM05D006825 ORTHO05D008510 3.2e-120 435.6 303 69.6
vmacro22141 Vaccinium macrocarpon HOM05D006825 ORTHO05D008510 3.2e-120 435.6 309 67.0
Lsat_1_v5_gn_4_145901 Lactuca sativa HOM05D006825 ORTHO05D008510 9.5e-120 434.1 301 70.1
Manes.01G148100 Manihot esculenta HOM05D006825 ORTHO05D008510 1.6e-119 433.3 306 68.0
Nitab4.5_0000438g0130 Nicotiana tabacum HOM05D006825 ORTHO05D008510 3.6e-119 432.2 309 67.0
Nitab4.5_0004340g0050 Nicotiana tabacum HOM05D006825 ORTHO05D008510 3.6e-119 432.2 313 66.8
Eucgr.I02337 Eucalyptus grandis HOM05D006825 ORTHO05D008510 6.1e-119 431.4 306 66.7
Cpa.g.sc6.269 Carica papaya HOM05D006825 ORTHO05D008510 8.0e-119 431.0 307 68.1
Nn3g20374 Nelumbo nucifera HOM05D006825 ORTHO05D008510 3.0e-118 429.1 310 67.1
Oeu053236.1 Olea europaea HOM05D006825 ORTHO05D008510 6.8e-118 427.9 306 67.3
THA.LOC104821331 Tarenaya hassleriana HOM05D006825 ORTHO05D008510 2.6e-117 426.0 304 67.4
Peaxi162Scf00635g00623 Petunia axillaris HOM05D006825 ORTHO05D008510 3.4e-117 425.6 309 66.0
MSTRG.14307 Avicennia marina HOM05D006825 ORTHO05D008510 7.5e-117 424.5 304 66.4
Sc03g0003620 Simmondsia chinensis HOM05D006825 ORTHO05D008510 7.5e-117 424.5 299 66.2
PGR119G0791 Punica granatum HOM05D006825 ORTHO05D008510 3.7e-116 422.2 308 64.3
CAN.G1817.4 Capsicum annuum HOM05D006825 ORTHO05D008510 1.1e-115 420.6 316 64.2
Sed0006507 Sechium edule HOM05D000348 ORTHO05D000244 1.8e-115 419.9 305 65.9
PGSC0003DMG400022529 Solanum tuberosum HOM05D006825 ORTHO05D008510 3.1e-115 419.1 314 63.7
TWI09G1238 Tripterygium wilfordii HOM05D006825 ORTHO05D008510 4.1e-115 418.7 313 64.5
MELO3C007916.2 Cucumis melo HOM05D006825 ORTHO05D008510 1.6e-114 416.8 318 63.8
Solyc03g033450.4 Solanum lycopersicum HOM05D006825 ORTHO05D008510 5.9e-114 414.8 309 63.8
PSO541G4668 Papaver somniferum HOM05D006825 ORTHO05D008510 2.9e-113 412.5 317 64.7
Aqoxy2G04041 Aquilegia oxysepala HOM05D006825 ORTHO05D008510 1.9e-112 409.8 328 62.2
ClCG01G020380 Citrullus lanatus HOM05D000348 ORTHO05D000244 5.6e-112 408.3 339 60.2
Migut.H02145 Erythranthe guttata HOM05D006825 ORTHO05D008510 2.1e-111 406.4 300 65.0
CsaV3_6G047250 Cucumis sativus L. HOM05D006825 ORTHO05D008510 3.6e-111 405.6 306 63.7
AT5G66180 Arabidopsis thaliana HOM05D006825 ORTHO05D008510 1.4e-110 403.7 304 63.2
Sp2g30510 Schrenkiella parvula HOM05D006825 ORTHO05D008510 3.0e-110 402.5 304 63.8
A02p44590 Brassica napus HOM05D006825 ORTHO05D008510 4.0e-110 402.1 297 63.6
BraA02t09375Z Brassica rapa HOM05D006825 ORTHO05D008510 4.0e-110 402.1 297 63.6
CARHR281560 Cardamine hirsuta HOM05D006825 ORTHO05D008510 6.8e-110 401.4 304 63.5
Ah.03g148930 Amaranthus hybridus HOM05D006825 ORTHO05D008510 1.2e-109 400.6 307 62.5
Zm00001eb417020 Zea mays HOM05D006825 ORTHO05D008510 2.0e-109 399.8 303 62.4
MBI02_g07022_MAGBIO Magnolia biondii HOM05D006825 ORTHO05D008510 2.6e-109 399.4 295 65.1
BolC2t12557H Brassica oleracea HOM05D006825 ORTHO05D008510 3.4e-109 399.1 297 63.6
Os02g0320100 Oryza sativa ssp. japonica HOM05D006825 ORTHO05D008510 7.5e-109 397.9 307 62.2
Aa31LG1G14680 Aethionema arabicum HOM05D006825 ORTHO05D008510 2.9e-108 396.0 296 62.8
GSVIVG01018762001 Vitis vinifera HOM05D006825 ORTHO05D008510 1.1e-107 394.0 304 64.8
Carub.0008s2832 Capsella rubella HOM05D006825 ORTHO05D008510 1.2e-106 390.6 304 61.8
AL8G45350 Arabidopsis lyrata HOM05D006825 ORTHO05D008510 2.0e-106 389.8 304 61.2
unitig_744.g24494 Utricularia gibba HOM05D000120 ORTHO05D008510 1.3e-105 387.1 300 61.7
Thhalv10004380m.g Eutrema salsugineum HOM05D006825 ORTHO05D008510 1.7e-105 386.7 299 65.2
PSO675G9026 Papaver somniferum HOM05D006825 ORTHO05D008510 1.9e-104 383.3 374 53.2
HPP92_013273 Vanilla planifolia HOM05D006825 ORTHO05D008510 2.5e-104 382.9 298 60.4
CDE01G0266 Ceratophyllum demersum HOM05D006825 ORTHO05D008510 3.1e-102 375.9 303 58.4
ATR1098G103 Amborella trichopoda HOM05D006825 ORTHO05D008510 2.6e-101 372.9 304 60.2
SGA_v2.0_scaffold80G25916 Striga asiatica HOM05D006825 ORTHO05D008510 1.0e-97 360.9 296 62.5
BcaC03g18427 Brassica carinata HOM05D006825 ORTHO05D008510 1.3e-97 360.5 297 58.9
SHI46760 Sapria himalayana HOM05D006825 ORTHO05D008510 2.3e-94 349.7 331 52.9
FAN23G1707 Fragaria x ananassa HOM05D000348 ORTHO05D000244 9.2e-91 337.8 327 55.4
Psat4g100720 Pisum sativum HOM05D006825 ORTHO05D008510 3.0e-89 332.8 273 61.2
Actinidia17432 Actinidia chinensis HOM05D006825 ORTHO05D008510 5.1e-89 332.0 265 62.3
SalBow7G2494 Salvia bowleyana HOM05D006825 ORTHO05D008510 1.2e-87 327.4 267 61.0
ECA232G1215 Erigeron canadensis HOM05D006825 ORTHO05D008510 2.0e-85 320.1 223 69.1
TPR.G8413 Trifolium pratense HOM05D006825 ORTHO05D008510 1.2e-82 310.8 181 80.7
Pp3c17_24030 Physcomitrium patens HOM05D006825 ORTHO05D008510 1.0e-81 307.8 324 51.2
Sopen03g006200 Solanum pennellii HOM05D006825 ORTHO05D008510 5.1e-81 305.4 221 67.9
Mapoly0052s0057 Marchantia polymorpha HOM05D006825 ORTHO05D008510 9.3e-75 284.6 285 51.2
SMO347G0256 Selaginella moellendorffii HOM05D006825 ORTHO05D008510 1.6e-74 283.9 312 47.4
AagrBONN_evm.TU.Sc2ySwM_344.4862 Anthoceros agrestis HOM05D006825 ORTHO05D008510 4.8e-71 272.3 286 48.3
SEGI_17861 Sequoiadendron giganteum HOM05D006825 ORTHO05D008510 3.0e-57 226.5 167 65.3
TPR.G39556 Trifolium pratense HOM05D006825 ORTHO05D008510 6.2e-55 218.8 121 82.6
Atru.chr6.2520 Acer truncatum HOM05D006825 ORTHO05D008510 6.5e-52 208.8 144 66.0
CBR_g38194 Chara braunii HOM05D006825 ORTHO05D008510 1.3e-47 194.5 166 60.8
SEGI_38048 Sequoiadendron giganteum HOM05D006825 ORTHO05D008510 1.2e-34 151.4 163 51.5
arahy.Tifrunner.gnm1.ann1.K0MBH8 Arachis hypogaea HOM05D006825 ORTHO05D008510 9.7e-32 141.7 91 71.4
VMungo0027G0001 Vigna mungo HOM05D006825 ORTHO05D008510 5.9e-29 132.5 81 81.5
ECA232G4867 Erigeron canadensis HOM05D006825 ORTHO05D008510 4.4e-24 116.3 82 59.8
SEGI_00238 Sequoiadendron giganteum HOM05D006825 ORTHO05D008510 1.6e-21 107.8 81 56.8
SEGI_39386 Sequoiadendron giganteum HOM05D006825 ORTHO05D008510 9.4e-19 98.6 91 50.5
HanXRQChr02g0040701 Helianthus annuus HOM05D006825 ORTHO05D008510 1.3e-12 78.2 45 75.6
Psat0s2453g0160 Pisum sativum HOM05D006825 ORTHO05D008510 2.5e-11 73.9 39 82.1
Medtr8g075450 Medicago truncatula HOM05D006825 ORTHO05D048890 3.6e-10 70.1 40 82.5
Os02g0217800 Oryza sativa ssp. japonica HOM05D004621 ORTHO05D005817 1.4e-06 58.2 122 29.5
CAN.G275.11 Capsicum annuum HOM05D005309 ORTHO05D006648 2.4e-06 57.4 285 23.5
Cre50.g761447 Chlamydomonas reinhardtii HOM05D001724 ORTHO05D007284 2.4e-06 57.4 140 30.7
Glyma.04G054300 Glycine max HOM05D004621 ORTHO05D005817 3.1e-06 57.0 115 31.3
arahy.Tifrunner.gnm1.ann1.I8I12Q Arachis hypogaea HOM05D004621 ORTHO05D005817 4.1e-06 56.6 115 31.3
Glyma.06G054600 Glycine max HOM05D004621 ORTHO05D005817 5.4e-06 56.2 115 31.3
Gohir.A05G040100 Gossypium hirsutum HOM05D004621 ORTHO05D005817 5.4e-06 56.2 145 26.9
Gohir.D05G041600 Gossypium hirsutum HOM05D004621 ORTHO05D005817 9.1e-06 55.5 145 26.9
Gorai.009G042200 Gossypium raimondii HOM05D004621 ORTHO05D005817 9.1e-06 55.5 145 26.9
Lj1g0023758 Lotus japonicus HOM05D004621 ORTHO05D005817 9.1e-06 55.5 115 30.4
SGA_v2.0_scaffold20G09183 Striga asiatica HOM05D004621 ORTHO05D005817 9.1e-06 55.5 113 31.0


User provided reference genes

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