Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G262200 Phaseolus vulgaris HOM05D007514 ORTHO05D009469 5.1e-83 311.2 181 100.0
VMungo0251G0111 Vigna mungo HOM05D007514 ORTHO05D009469 7.0e-72 274.2 181 84.5
Glyma.16G128900 Glycine max HOM05D007514 ORTHO05D009469 3.3e-58 228.8 184 78.3
Glyma.02G048800 Glycine max HOM05D007514 ORTHO05D009469 2.0e-47 193.0 186 70.4
Lj4g0013490 Lotus japonicus HOM05D007514 ORTHO05D009469 9.2e-40 167.5 185 55.1
Ca_22373_v3 Cicer arietinum L. HOM05D007514 ORTHO05D009469 8.6e-38 161.0 187 54.5
Lalb_Chr05g0229901 Lupinus albus HOM05D007514 ORTHO05D009469 8.0e-36 154.5 182 59.3
QL06p032616 Quercus lobata HOM05D007514 ORTHO05D009469 1.7e-33 146.7 179 54.2
Psat4g099040 Pisum sativum HOM05D007514 ORTHO05D009469 4.9e-33 145.2 188 55.3
CiPaw.07G058000 Carya illinoinensis HOM05D007514 ORTHO05D009469 1.4e-32 143.7 183 49.2
MD02G1133200 Malus domestica HOM05D007514 ORTHO05D009469 1.0e-30 137.5 122 59.8
Sc16g0002120 Simmondsia chinensis HOM05D007514 ORTHO05D009469 1.7e-30 136.7 121 57.0
Cpa.g.sc6.242 Carica papaya HOM05D007514 ORTHO05D009469 3.0e-30 136.0 183 45.4
TWI09G1362 Tripterygium wilfordii HOM05D007514 ORTHO05D009469 6.6e-30 134.8 123 57.7
Manes.02G103801 Manihot esculenta HOM05D007514 ORTHO05D009469 8.6e-30 134.4 118 55.9
unitig_26.g10012 Utricularia gibba HOM05D007514 ORTHO05D009469 8.6e-30 134.4 106 66.0
Ciclev10026620m.g Citrus clementina HOM05D007514 ORTHO05D009469 1.5e-29 133.7 102 63.7
Prupe.7G167500 Prunus persica HOM05D007514 ORTHO05D009469 2.5e-29 132.9 124 58.1
Carub.0003s3210 Capsella rubella HOM05D007514 ORTHO05D009469 3.3e-29 132.5 180 45.0
Thhalv10022884m.g Eutrema salsugineum HOM05D007514 ORTHO05D009469 4.3e-29 132.1 106 59.4
arahy.Tifrunner.gnm1.ann1.EYR4CZ Arachis hypogaea HOM05D007514 ORTHO05D009469 5.6e-29 131.7 192 48.4
Oeu059507.1 Olea europaea HOM05D007514 ORTHO05D009469 7.3e-29 131.3 106 61.3
AT2G17972 Arabidopsis thaliana HOM05D007514 ORTHO05D009469 9.5e-29 131.0 106 62.3
Cc07_g10640 Coffea canephora HOM05D007514 ORTHO05D009469 9.5e-29 131.0 106 64.2
Gohir.A02G170200 Gossypium hirsutum HOM05D007514 ORTHO05D009469 9.5e-29 131.0 110 57.3
Potri.005G115000 Populus trichocarpa HOM05D007514 ORTHO05D009469 9.5e-29 131.0 174 44.3
AL3G51000 Arabidopsis lyrata HOM05D007514 ORTHO05D009469 1.2e-28 130.6 106 61.3
Sabra05G0094100 Salix brachista HOM05D007514 ORTHO05D009469 1.2e-28 130.6 107 61.7
DCAR_016611 Daucus carota HOM05D007514 ORTHO05D009469 1.6e-28 130.2 109 61.5
Dinv33625 Davidia involucrata HOM05D007514 ORTHO05D009469 1.6e-28 130.2 106 66.0
Duzib264G0291 Durio zibethinus HOM05D007514 ORTHO05D009469 2.1e-28 129.8 108 60.2
Migut.L00252 Erythranthe guttata HOM05D007514 ORTHO05D009469 2.8e-28 129.4 113 61.1
Migut.L00394 Erythranthe guttata HOM05D007514 ORTHO05D009469 2.8e-28 129.4 113 61.1
Aqoxy5G01772 Aquilegia oxysepala HOM05D007514 ORTHO05D009469 3.6e-28 129.0 125 54.4
BcaC06g36349 Brassica carinata HOM05D007514 ORTHO05D009469 3.6e-28 129.0 116 57.8
C07p05010 Brassica napus HOM05D007514 ORTHO05D009469 3.6e-28 129.0 116 57.8
BolC7t40902H Brassica oleracea HOM05D007514 ORTHO05D009469 3.6e-28 129.0 116 57.8
ClCG01G020240 Citrullus lanatus HOM05D007514 ORTHO05D009469 3.6e-28 129.0 69 85.5
arahy.Tifrunner.gnm1.ann1.JXSY0Y Arachis hypogaea HOM05D007514 ORTHO05D009469 4.7e-28 128.6 190 55.8
Sp3g31390 Schrenkiella parvula HOM05D007514 ORTHO05D009469 4.7e-28 128.6 107 60.7
MSTRG.883 Avicennia marina HOM05D007514 ORTHO05D009469 8.0e-28 127.9 121 57.0
A07p02710 Brassica napus HOM05D007514 ORTHO05D009469 1.1e-27 127.5 116 56.9
BraA07t28071Z Brassica rapa HOM05D007514 ORTHO05D009469 1.1e-27 127.5 116 56.9
Gorai.003G010100 Gossypium raimondii HOM05D007514 ORTHO05D009469 1.4e-27 127.1 108 56.5
Lsat_1_v5_gn_3_74241 Lactuca sativa HOM05D007514 ORTHO05D009469 1.4e-27 127.1 105 61.0
Nn6g32368 Nelumbo nucifera HOM05D007514 ORTHO05D009469 1.4e-27 127.1 110 57.3
PGSC0003DMG401003636 Solanum tuberosum HOM05D007514 ORTHO05D009469 1.4e-27 127.1 118 59.3
Thecc.01G019700 Theobroma cacao HOM05D007514 ORTHO05D009469 1.4e-27 127.1 184 49.5
TPR.G30050 Trifolium pratense HOM05D007514 ORTHO05D009469 1.4e-27 127.1 102 66.7
CARHR108460 Cardamine hirsuta HOM05D007514 ORTHO05D009469 1.8e-27 126.7 181 42.5
AUR62011597 Chenopodium quinoa HOM05D007514 ORTHO05D009469 2.3e-27 126.3 110 59.1
Gohir.D03G009800 Gossypium hirsutum HOM05D007514 ORTHO05D009469 2.3e-27 126.3 108 56.5
PGR119G2084 Punica granatum HOM05D007514 ORTHO05D009469 2.3e-27 126.3 114 60.5
Cfa006967 Carpinus fangiana HOM05D007514 ORTHO05D009469 3.1e-27 125.9 70 80.0
Peaxi162Scf00083g00065 Petunia axillaris HOM05D007514 ORTHO05D009469 3.1e-27 125.9 73 79.5
Ah.01g021120 Amaranthus hybridus HOM05D007514 ORTHO05D009469 4.0e-27 125.6 106 57.5
CSS0010041 Camellia sinensis var. sinensis HOM05D007514 ORTHO05D009469 4.0e-27 125.6 106 56.6
CSS0030936 Camellia sinensis var. sinensis HOM05D007514 ORTHO05D009469 4.0e-27 125.6 106 56.6
Hma1.2p1_0743F.1_g211610 Hydrangea macrophylla HOM05D007514 ORTHO05D009469 4.0e-27 125.6 102 63.7
THA.LOC104819752 Tarenaya hassleriana HOM05D007514 ORTHO05D009469 4.0e-27 125.6 109 59.6
Haze_03771 Corylus avellana HOM05D007514 ORTHO05D009469 5.2e-27 125.2 178 44.9
BcaB03g16581 Brassica carinata HOM05D007514 ORTHO05D009469 6.8e-27 124.8 118 55.1
MELO3C007896.2 Cucumis melo HOM05D007514 ORTHO05D009469 6.8e-27 124.8 68 83.8
MBI05_g15346_MAGBIO Magnolia biondii HOM05D007514 ORTHO05D009469 6.8e-27 124.8 107 57.9
Medtr8g075960 Medicago truncatula HOM05D007514 ORTHO05D009469 6.8e-27 124.8 187 51.9
COL.COLO4_21918 Corchorus olitorius HOM05D007514 ORTHO05D009469 1.5e-26 123.6 111 55.9
CsaV3_6G047030 Cucumis sativus L. HOM05D007514 ORTHO05D009469 4.4e-26 122.1 94 64.9
Aa31LG8G15140 Aethionema arabicum HOM05D007514 ORTHO05D009469 5.8e-26 121.7 107 57.9
Rhsim08G0034000 Rhododendron simsii HOM05D007514 ORTHO05D009469 9.8e-26 120.9 101 59.4
Atru.chr3.793 Acer truncatum HOM05D007514 ORTHO05D009469 4.9e-25 118.6 86 66.3
CANSAT01G2848 Cannabis sativa HOM05D007514 ORTHO05D009469 4.9e-25 118.6 85 65.9
Lj2P467T19 Lonicera japonica HOM05D007514 ORTHO05D009469 6.4e-25 118.2 94 59.6
PSO541G1849 Papaver somniferum HOM05D007514 ORTHO05D009469 6.4e-25 118.2 110 52.7
Sopen02g028770 Solanum pennellii HOM05D007514 ORTHO05D009469 6.4e-25 118.2 71 77.5
PSO675G8043 Papaver somniferum HOM05D007514 ORTHO05D009469 1.1e-24 117.5 165 42.4
SGA_v2.0_scaffold234G43648 Striga asiatica HOM05D007514 ORTHO05D009469 1.1e-24 117.5 110 59.1
EL10Ac9g21968 Beta vulgaris HOM05D007514 ORTHO05D009469 1.4e-24 117.1 68 76.5
Os06g0715200 Oryza sativa ssp. japonica HOM05D007514 ORTHO05D009469 1.9e-24 116.7 74 70.3
Nitab4.5_0006286g0070 Nicotiana tabacum HOM05D007514 ORTHO05D009469 2.4e-24 116.3 70 77.1
Sed0026037 Sechium edule HOM05D007514 ORTHO05D009469 4.1e-24 115.5 111 56.8
HPP92_025365 Vanilla planifolia HOM05D007514 ORTHO05D009469 5.4e-24 115.2 117 51.3
Nitab4.5_0001959g0010 Nicotiana tabacum HOM05D007514 ORTHO05D009469 9.2e-24 114.4 120 54.2
FvH4_1g11940 Fragaria vesca HOM05D007514 ORTHO05D009469 1.6e-23 113.6 69 71.0
FAN19G0235 Fragaria x ananassa HOM05D007514 ORTHO05D009469 1.6e-23 113.6 69 71.0
FAN23G2896 Fragaria x ananassa HOM05D007514 ORTHO05D009469 1.6e-23 113.6 69 71.0
FAN26G2491 Fragaria x ananassa HOM05D007514 ORTHO05D009469 1.6e-23 113.6 69 71.0
Zm00001eb228020 Zea mays HOM05D007514 ORTHO05D009469 6.0e-23 111.7 67 73.1
TAR365G0263 Trochodendron aralioides HOM05D007514 ORTHO05D009469 3.0e-22 109.4 140 45.7
TAR365G1204 Trochodendron aralioides HOM05D007514 ORTHO05D009469 3.0e-22 109.4 140 45.7
arahy.Tifrunner.gnm1.ann1.KXHU4R Arachis hypogaea HOM05D007514 ORTHO05D009469 1.1e-21 107.5 115 56.5
Pp3c15_14110 Physcomitrium patens HOM05D007514 ORTHO05D009469 2.5e-21 106.3 100 55.0
AagrBONN_evm.TU.Sc2ySwM_344.4071 Anthoceros agrestis HOM05D007514 ORTHO05D009469 2.8e-20 102.8 84 54.8
SMO353G0320 Selaginella moellendorffii HOM05D007514 ORTHO05D009469 6.2e-20 101.7 125 48.8
Mapoly0011s0103 Marchantia polymorpha HOM05D007514 ORTHO05D009469 4.0e-19 99.0 63 71.4
Duzib147G0981 Durio zibethinus HOM05D007514 ORTHO05D009469 6.8e-19 98.2 101 51.5
FAN28G1094 Fragaria x ananassa HOM05D007514 ORTHO05D009469 7.5e-18 94.7 101 48.5
CAN.G66.6 Capsicum annuum HOM05D007514 ORTHO05D009469 9.9e-18 94.4 82 59.8
SEGI_16775 Sequoiadendron giganteum HOM05D007514 ORTHO05D009469 9.9e-18 94.4 56 75.0
Cre05.g245102 Chlamydomonas reinhardtii HOM05D007514 ORTHO05D009469 1.3e-14 84.0 106 41.5
MCO09G231 Micromonas commoda HOM05D007514 ORTHO05D009469 2.3e-06 56.6 60 38.3
PRCOL_00005620 Prasinoderma coloniale HOM05D007514 ORTHO05D009469 5.1e-06 55.5 71 42.3


User provided reference genes

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