Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G259600 Phaseolus vulgaris HOM05D000963 ORTHO05D004715 1.6e-44 182.2 83 100.0
DCAR_014935 Daucus carota HOM05D000963 ORTHO05D004715 4.5e-34 147.5 88 78.4
arahy.Tifrunner.gnm1.ann1.54C0KZ Arachis hypogaea HOM05D000963 ORTHO05D004715 1.7e-33 145.6 88 79.5
arahy.Tifrunner.gnm1.ann1.0S9V2W Arachis hypogaea HOM05D000963 ORTHO05D004715 5.0e-33 144.1 88 78.4
arahy.Tifrunner.gnm1.ann1.56M0GV Arachis hypogaea HOM05D000963 ORTHO05D004715 5.0e-33 144.1 88 78.4
arahy.Tifrunner.gnm1.ann1.E29LBX Arachis hypogaea HOM05D000963 ORTHO05D004715 5.0e-33 144.1 88 78.4
arahy.Tifrunner.gnm1.ann1.NRNC1F Arachis hypogaea HOM05D000963 ORTHO05D004715 5.0e-33 144.1 88 78.4
arahy.Tifrunner.gnm1.ann1.PH4GL6 Arachis hypogaea HOM05D000963 ORTHO05D004715 5.0e-33 144.1 88 78.4
arahy.Tifrunner.gnm1.ann1.RS9AFF Arachis hypogaea HOM05D000963 ORTHO05D004715 5.0e-33 144.1 88 78.4
arahy.Tifrunner.gnm1.ann1.TDDH8C Arachis hypogaea HOM05D000963 ORTHO05D004715 5.0e-33 144.1 88 78.4
arahy.Tifrunner.gnm1.ann1.UGP0DD Arachis hypogaea HOM05D000963 ORTHO05D004715 5.0e-33 144.1 88 78.4
arahy.Tifrunner.gnm1.ann1.WD30LQ Arachis hypogaea HOM05D000963 ORTHO05D004715 5.0e-33 144.1 88 78.4
arahy.Tifrunner.gnm1.ann1.ZA1EMG Arachis hypogaea HOM05D000963 ORTHO05D004715 5.0e-33 144.1 88 78.4
FvH4_c3g00050 Fragaria vesca HOM05D000963 ORTHO05D004715 5.0e-33 144.1 88 77.3
Lsat_1_v5_gn_1_88180 Lactuca sativa HOM05D000963 ORTHO05D004715 8.5e-33 143.3 88 78.4
Lsat_1_v5_gn_2_97121 Lactuca sativa HOM05D000963 ORTHO05D004715 8.5e-33 143.3 88 78.4
Lsat_1_v5_gn_9_121741 Lactuca sativa HOM05D000963 ORTHO05D004715 8.5e-33 143.3 88 78.4
Sed0014585 Sechium edule HOM05D000963 ORTHO05D004715 8.5e-33 143.3 88 78.4
QL10p017079 Quercus lobata HOM05D000963 ORTHO05D004715 1.1e-32 142.9 87 78.2
QL93p0141_0000 Quercus lobata HOM05D000963 ORTHO05D004715 1.1e-32 142.9 87 78.2
QL93p0141_0026 Quercus lobata HOM05D000963 ORTHO05D004715 1.1e-32 142.9 87 78.2
Migut.D01391 Erythranthe guttata HOM05D000963 ORTHO05D004715 1.9e-32 142.1 88 77.3
Atru.chr1.3576 Acer truncatum HOM05D000963 ORTHO05D004715 2.5e-32 141.7 88 77.3
arahy.Tifrunner.gnm1.ann1.WSE485 Arachis hypogaea HOM05D000963 ORTHO05D004715 2.5e-32 141.7 88 77.3
AL9U11970 Arabidopsis lyrata HOM05D000963 ORTHO05D004715 4.2e-32 141.0 88 77.3
C09p40280 Brassica napus HOM05D000963 ORTHO05D004715 4.2e-32 141.0 88 77.3
BolSC44t60816H Brassica oleracea HOM05D000963 ORTHO05D004715 4.2e-32 141.0 88 77.3
BolSC44t60829H Brassica oleracea HOM05D000963 ORTHO05D004715 4.2e-32 141.0 88 77.3
BolSC49t61135H Brassica oleracea HOM05D000963 ORTHO05D004715 4.2e-32 141.0 88 77.3
BraSC103t45422Z Brassica rapa HOM05D000963 ORTHO05D004715 4.2e-32 141.0 88 77.3
BraSC103t45433Z Brassica rapa HOM05D000963 ORTHO05D004715 4.2e-32 141.0 88 77.3
BraSC138t45541Z Brassica rapa HOM05D000963 ORTHO05D004715 4.2e-32 141.0 88 77.3
BraSC25t45904Z Brassica rapa HOM05D000963 ORTHO05D004715 4.2e-32 141.0 88 77.3
BraSC25t45917Z Brassica rapa HOM05D000963 ORTHO05D004715 4.2e-32 141.0 88 77.3
Lsat_1_v5_gn_8_139840 Lactuca sativa HOM05D000963 ORTHO05D004715 4.2e-32 141.0 88 77.3
BolC9t56918H Brassica oleracea HOM05D000963 ORTHO05D004715 9.4e-32 139.8 88 76.1
Potri.011G074033 Populus trichocarpa HOM05D000963 ORTHO05D004715 1.2e-31 139.4 88 76.1
BolSC29t60541H Brassica oleracea HOM05D000963 ORTHO05D004715 1.6e-31 139.0 88 77.3
COL.COLO4_02154 Corchorus olitorius HOM05D000963 ORTHO05D004715 2.7e-31 138.3 88 76.1
BraSC58t46456Z Brassica rapa HOM05D000963 ORTHO05D004715 3.6e-31 137.9 86 76.7
Sopen06g015060 Solanum pennellii HOM05D000963 ORTHO05D004715 4.7e-31 137.5 89 76.4
PGSC0003DMG400034831 Solanum tuberosum HOM05D000963 ORTHO05D004715 4.7e-31 137.5 89 76.4
Aqoxy38s008 Aquilegia oxysepala HOM05D000963 ORTHO05D004715 1.0e-30 136.3 88 75.0
BolSC37t60787H Brassica oleracea HOM05D000963 ORTHO05D004715 1.0e-30 136.3 89 76.4
BraSC59t46533Z Brassica rapa HOM05D000963 ORTHO05D004715 1.4e-30 136.0 88 75.0
Sed0012027 Sechium edule HOM05D000963 ORTHO05D004715 3.0e-30 134.8 88 73.9
BolSC45t60916H Brassica oleracea HOM05D000963 ORTHO05D004715 3.9e-30 134.4 84 76.2
Gohir.1Z049781 Gossypium hirsutum HOM05D000963 ORTHO05D004715 3.9e-30 134.4 88 75.0
Gohir.A07G151200 Gossypium hirsutum HOM05D000963 ORTHO05D004715 5.1e-30 134.0 88 75.0
Gohir.A05G286366 Gossypium hirsutum HOM05D000963 ORTHO05D004715 6.7e-30 133.7 88 76.1
Gohir.D04G096676 Gossypium hirsutum HOM05D000963 ORTHO05D004715 8.8e-30 133.3 88 73.9
Gohir.A02G134101 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.6e-29 131.7 84 75.0
Gohir.A04G057626 Gossypium hirsutum HOM05D000963 ORTHO05D004715 4.4e-29 131.0 88 71.6
CAN.G1298.20 Capsicum annuum HOM05D000963 ORTHO05D004715 5.7e-29 130.6 89 73.0
CAN.G929.1 Capsicum annuum HOM05D000963 ORTHO05D004715 5.7e-29 130.6 89 73.0
Lsat_1_v5_gn_5_181901 Lactuca sativa HOM05D000963 ORTHO05D004715 5.7e-29 130.6 85 74.1
Lsat_1_v5_gn_5_4701 Lactuca sativa HOM05D000963 ORTHO05D004715 5.7e-29 130.6 85 74.1
Lsat_1_v5_gn_2_50801 Lactuca sativa HOM05D000963 ORTHO05D004715 7.4e-29 130.2 87 73.6
CAN.G67.2 Capsicum annuum HOM05D000963 ORTHO05D004715 2.8e-28 128.3 89 73.0
arahy.Tifrunner.gnm1.ann1.0QCF99 Arachis hypogaea HOM05D000963 ORTHO05D004715 3.7e-28 127.9 79 77.2
arahy.Tifrunner.gnm1.ann1.6K111H Arachis hypogaea HOM05D000963 ORTHO05D004715 3.7e-28 127.9 79 77.2
arahy.Tifrunner.gnm1.ann1.B9EW81 Arachis hypogaea HOM05D000963 ORTHO05D004715 3.7e-28 127.9 79 77.2
arahy.Tifrunner.gnm1.ann1.NMB5YK Arachis hypogaea HOM05D000963 ORTHO05D004715 3.7e-28 127.9 79 77.2
arahy.Tifrunner.gnm1.ann1.QIDR5S Arachis hypogaea HOM05D000963 ORTHO05D004715 3.7e-28 127.9 79 77.2
Gohir.D04G054150 Gossypium hirsutum HOM05D000963 ORTHO05D004715 4.8e-28 127.5 88 72.7
HPP92_028430 Vanilla planifolia HOM05D000963 ORTHO05D004715 1.4e-27 125.9 88 71.6
CAN.G1185.10 Capsicum annuum HOM05D000963 ORTHO05D004715 2.4e-27 125.2 86 69.8
arahy.Tifrunner.gnm1.ann1.LM30Y3 Arachis hypogaea HOM05D000963 ORTHO05D004715 3.1e-27 124.8 79 73.4
CAN.G965.10 Capsicum annuum HOM05D000963 ORTHO05D004715 9.1e-27 123.2 89 70.8
Dinv39831 Davidia involucrata HOM05D000963 ORTHO05D004715 2.0e-26 122.1 78 75.6
Medtr5g080940 Medicago truncatula HOM05D000963 ORTHO05D004715 2.0e-26 122.1 86 68.6
Sc01g0005720 Simmondsia chinensis HOM05D000963 ORTHO05D004715 5.9e-26 120.6 88 68.2
Gohir.D03G074976 Gossypium hirsutum HOM05D000963 ORTHO05D004715 7.7e-26 120.2 79 72.2
Lsat_1_v5_gn_1_109481 Lactuca sativa HOM05D000963 ORTHO05D004715 1.3e-25 119.4 87 65.5
arahy.Tifrunner.gnm1.ann1.R4PVYI Arachis hypogaea HOM05D000963 ORTHO05D004715 1.7e-25 119.0 78 73.1
Dinv05169 Davidia involucrata HOM05D000963 ORTHO05D004715 1.7e-25 119.0 78 74.4
CsaV3_2G008200 Cucumis sativus L. HOM05D000963 ORTHO05D004715 2.9e-25 118.2 75 76.0
Sed0003522 Sechium edule HOM05D000963 ORTHO05D004715 2.9e-25 118.2 82 72.0
Sed0006422 Sechium edule HOM05D000963 ORTHO05D004715 2.9e-25 118.2 82 72.0
Actinidia23508 Actinidia chinensis HOM05D000963 ORTHO05D004715 5.0e-25 117.5 77 74.0
FAN13G1706 Fragaria x ananassa HOM05D000963 ORTHO05D004715 5.0e-25 117.5 74 75.7
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 1.9e-24 115.5 74 77.0
ECA074G0008 Erigeron canadensis HOM05D000963 ORTHO05D004715 1.9e-24 115.5 74 77.0
Gohir.D01G023469 Gossypium hirsutum HOM05D000963 ORTHO05D004715 3.2e-24 114.8 74 74.3
BraSC143t45652Z Brassica rapa HOM05D000963 ORTHO05D004715 4.2e-24 114.4 89 67.4
unitig_91.g26522 Utricularia gibba HOM05D000963 ORTHO05D004715 7.2e-24 113.6 85 64.7
unitig_91.g26525 Utricularia gibba HOM05D000963 ORTHO05D004715 7.2e-24 113.6 85 64.7
Sabra11G0069300 Salix brachista HOM05D000963 ORTHO05D004715 9.4e-24 113.2 82 69.5
Oeu015131.2 Olea europaea HOM05D000963 ORTHO05D004715 1.6e-23 112.5 77 68.8
FAN18G1953 Fragaria x ananassa HOM05D000315 ORTHO05D004100 2.1e-23 112.1 81 67.9
HPP92_028419 Vanilla planifolia HOM05D000963 ORTHO05D004715 3.6e-23 111.3 81 69.1
HPP92_028432 Vanilla planifolia HOM05D000963 ORTHO05D004715 3.6e-23 111.3 81 69.1
C09p39330 Brassica napus HOM05D000963 ORTHO05D004715 8.0e-23 110.2 88 64.8
Oeu012821.1 Olea europaea HOM05D000963 ORTHO05D004715 1.4e-22 109.4 83 66.3
HPP92_028383 Vanilla planifolia HOM05D000963 ORTHO05D004715 4.0e-22 107.8 81 67.9
HPP92_028406 Vanilla planifolia HOM05D000963 ORTHO05D004715 4.0e-22 107.8 81 67.9
HPP92_028415 Vanilla planifolia HOM05D000963 ORTHO05D004715 4.0e-22 107.8 81 67.9
VMungo0331G0858 Vigna mungo HOM05D000963 ORTHO05D004715 1.1e-21 106.3 69 72.5
Glyma.06G274000 Glycine max HOM05D000963 ORTHO05D004715 1.5e-21 105.9 88 64.8
Gorai.012G060700 Gossypium raimondii HOM05D000963 ORTHO05D004715 2.6e-21 105.1 74 71.6
Nitab4.5_0008665g0030 Nicotiana tabacum HOM05D000963 ORTHO05D004715 2.6e-21 105.1 79 67.1
Oeu050315.1 Olea europaea HOM05D000963 ORTHO05D004715 1.7e-20 102.4 60 80.0
Gorai.002G027900 Gossypium raimondii HOM05D000963 ORTHO05D004715 2.2e-20 102.1 74 68.9
Gohir.A01G139826 Gossypium hirsutum HOM05D000963 ORTHO05D004715 3.7e-20 101.3 88 61.4
Gohir.A04G039030 Gossypium hirsutum HOM05D000963 ORTHO05D004715 6.3e-20 100.5 64 75.0
Gohir.D01G169154 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.4e-19 98.6 64 73.4
SalBow1G2814 Salvia bowleyana HOM05D000963 ORTHO05D004715 1.2e-18 96.3 58 79.3
SalBow1G5969 Salvia bowleyana HOM05D000963 ORTHO05D004715 1.2e-18 96.3 58 79.3
BraSC59t46506Z Brassica rapa HOM05D000963 ORTHO05D004715 3.5e-18 94.7 58 77.6
Rhsim12G0135200 Rhododendron simsii HOM05D000963 ORTHO05D004715 3.5e-18 94.7 56 78.6
arahy.Tifrunner.gnm1.ann1.D5AR02 Arachis hypogaea HOM05D000963 ORTHO05D004715 1.0e-17 93.2 60 75.0
BcaNung01516 Brassica carinata HOM05D000963 ORTHO05D004715 1.2e-15 86.3 60 71.7
CSS0016818 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D004715 6.1e-15 84.0 53 73.6
Sed0011513 Sechium edule HOM05D000963 ORTHO05D004715 2.3e-14 82.0 82 57.3
Psat3g162200 Pisum sativum HOM05D000963 ORTHO05D004715 5.2e-14 80.9 49 77.6
DCAR_017253 Daucus carota HOM05D000963 ORTHO05D004715 2.6e-13 78.6 55 67.3
Mapoly0147s0015 Marchantia polymorpha HOM05D000963 ORTHO05D004715 5.7e-13 77.4 59 62.7
SabraPtG0005400 Salix brachista HOM05D000963 ORTHO05D004715 2.8e-12 75.1 48 75.0
Nitab4.5_0012234g0080 Nicotiana tabacum HOM05D000963 ORTHO05D004715 3.7e-12 74.7 38 89.5
TPR.G27622 Trifolium pratense HOM05D000963 ORTHO05D004715 8.3e-12 73.6 46 73.9
Gohir.A01G139250 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.1e-11 73.2 46 76.1
Hma1.2p1_0051F.1_g029250 Hydrangea macrophylla HOM05D000963 ORTHO05D004715 1.4e-11 72.8 43 76.7
Sc25g0002020 Simmondsia chinensis HOM05D000963 ORTHO05D004715 1.4e-11 72.8 45 73.3
Gohir.D11G164850 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.8e-11 72.4 46 76.1
Lsat_1_v5_gn_2_90421 Lactuca sativa HOM05D000963 ORTHO05D004715 3.1e-11 71.6 48 75.0
Nitab4.5_0004137g0020 Nicotiana tabacum HOM05D000963 ORTHO05D004715 9.1e-11 70.1 48 75.0
CAN.G1594.2 Capsicum annuum HOM05D016096 ORTHO05D016167 1.2e-10 69.7 39 82.1
Nitab4.5_0007400g0120 Nicotiana tabacum HOM05D000963 ORTHO05D004715 1.0e-09 66.6 49 69.4
Medtr1g105230 Medicago truncatula HOM05D000963 ORTHO05D004715 2.9e-09 65.1 42 71.4
Psat5g119040 Pisum sativum HOM05D000963 ORTHO05D004715 4.2e-08 61.2 82 45.1
arahy.Tifrunner.gnm1.ann1.3DS1LI Arachis hypogaea HOM05D004473 ORTHO05D005652 7.2e-08 60.5 37 75.7
arahy.Tifrunner.gnm1.ann1.SGP77C Arachis hypogaea HOM05D004473 ORTHO05D005652 7.2e-08 60.5 37 75.7
Oeu033793.1 Olea europaea HOM05D001982 ORTHO05D003938 4.7e-07 57.8 36 75.0
Manes.18G094701 Manihot esculenta HOM05D000963 ORTHO05D004715 8.0e-07 57.0 34 79.4
Gohir.A01G119775 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.3e-06 55.5 36 75.0


User provided reference genes

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