Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G245601 Phaseolus vulgaris HOM05D007434 ORTHO05D009541 2.5e-46 188.3 90 100.0
Glyma.17G176500 Glycine max HOM05D007434 ORTHO05D009541 4.1e-33 144.4 90 80.0
Glyma.05G083900 Glycine max HOM05D007434 ORTHO05D009541 1.3e-31 139.4 90 76.7
Lalb_Chr05g0213221 Lupinus albus HOM05D007434 ORTHO05D009541 1.1e-20 103.2 95 60.0
Lj4g0023681 Lotus japonicus HOM05D007434 ORTHO05D009541 1.7e-18 95.9 104 56.7
TPR.G19007 Trifolium pratense HOM05D007434 ORTHO05D009541 2.2e-18 95.5 91 57.1
Glyma.01G184800 Glycine max HOM05D007434 ORTHO05D009541 1.2e-16 89.7 101 54.5
Glyma.11G057400 Glycine max HOM05D007434 ORTHO05D009541 1.6e-16 89.4 98 56.1
Lj2g0001941 Lotus japonicus HOM05D007434 ORTHO05D009541 3.5e-16 88.2 101 51.5
Lalb_Chr16g0378251 Lupinus albus HOM05D007434 ORTHO05D009541 1.7e-15 85.9 103 52.4
Lalb_Chr16g0378431 Lupinus albus HOM05D007434 ORTHO05D009541 1.7e-15 85.9 103 52.4
Potri.007G041400 Populus trichocarpa HOM05D007434 ORTHO05D009541 6.2e-13 77.4 96 46.9
COL.COLO4_11385 Corchorus olitorius HOM05D007434 ORTHO05D009541 5.8e-11 70.9 95 49.5
QL06p042201 Quercus lobata HOM05D007434 ORTHO05D009541 5.8e-11 70.9 84 46.4
FAN26G1295 Fragaria x ananassa HOM05D007434 ORTHO05D019139 7.6e-11 70.5 87 42.5
FAN28G0171 Fragaria x ananassa HOM05D007434 ORTHO05D009541 9.9e-11 70.1 87 42.5
Atru.chr3.395 Acer truncatum HOM05D007434 ORTHO05D013638 1.3e-10 69.7 94 50.0
CiPaw.01G021300 Carya illinoinensis HOM05D007434 ORTHO05D009541 1.7e-10 69.3 80 47.5
FvH4_1g15720 Fragaria vesca HOM05D007434 ORTHO05D009541 1.7e-10 69.3 82 43.9
FAN19G1812 Fragaria x ananassa HOM05D007434 ORTHO05D019139 1.7e-10 69.3 82 43.9
Thecc.01G053200 Theobroma cacao HOM05D007434 ORTHO05D009541 1.1e-09 66.6 97 44.3
Prupe.7G136100 Prunus persica HOM05D007434 ORTHO05D013638 4.2e-09 64.7 89 42.7
Manes.13G126300 Manihot esculenta HOM05D007434 ORTHO05D009541 9.3e-09 63.5 82 46.3
arahy.Tifrunner.gnm1.ann1.68HAUH Arachis hypogaea HOM05D048825 ORTHO05D009541 1.6e-08 62.8 80 46.2
ClCG01G016720 Citrullus lanatus HOM05D007434 ORTHO05D009541 1.6e-08 62.8 79 44.3
Oeu050758.1 Olea europaea HOM05D007434 ORTHO05D009541 1.6e-08 62.8 80 42.5
arahy.Tifrunner.gnm1.ann1.M8F4SW Arachis hypogaea HOM05D048825 ORTHO05D009541 2.7e-08 62.0 80 46.2
VMungo1083G0001 Vigna mungo HOM05D007434 ORTHO05D009541 2.7e-08 62.0 83 45.8
Sed0002185 Sechium edule HOM05D007434 ORTHO05D009541 3.5e-08 61.6 99 40.4
Manes.12G100300 Manihot esculenta HOM05D007434 ORTHO05D009541 7.8e-08 60.5 83 43.4
Lj4g0021906 Lotus japonicus HOM05D007434 ORTHO05D009541 1.0e-07 60.1 78 42.3
Ciclev10027212m.g Citrus clementina HOM05D007434 ORTHO05D009541 1.3e-07 59.7 83 45.8
Gohir.A11G190600 Gossypium hirsutum HOM05D007434 ORTHO05D009541 1.3e-07 59.7 98 39.8
Sed0004872 Sechium edule HOM05D007434 ORTHO05D009541 1.3e-07 59.7 83 39.8
Cpa.g.sc55.177 Carica papaya HOM05D007434 ORTHO05D009541 1.7e-07 59.3 117 39.3
DCAR_025721 Daucus carota HOM05D007434 ORTHO05D009541 3.0e-07 58.5 84 34.5
Gorai.007G211200 Gossypium raimondii HOM05D007434 ORTHO05D009541 3.9e-07 58.2 98 38.8
Gohir.D11G197400 Gossypium hirsutum HOM05D007434 ORTHO05D009541 5.1e-07 57.8 98 37.8
Lalb_Chr09g0333721 Lupinus albus HOM05D007434 ORTHO05D009541 6.6e-07 57.4 90 37.8
Lalb_Chr14g0368851 Lupinus albus HOM05D012250 ORTHO05D014447 8.7e-07 57.0 89 41.6
Nn1g05851 Nelumbo nucifera HOM05D007434 ORTHO05D009541 8.7e-07 57.0 96 40.6
Sed0015330 Sechium edule HOM05D007434 ORTHO05D009541 8.7e-07 57.0 86 41.9
QL06p042177 Quercus lobata HOM05D007434 ORTHO05D009541 1.1e-06 56.6 80 40.0
CsaV3_6G043140 Cucumis sativus L. HOM05D007434 ORTHO05D009541 1.5e-06 56.2 92 40.2
Sabra07G0037300 Salix brachista HOM05D008581 ORTHO05D009966 1.9e-06 55.8 102 33.3
TPR.G19016 Trifolium pratense HOM05D007434 ORTHO05D009541 1.9e-06 55.8 95 44.2
Lsat_1_v5_gn_4_167700 Lactuca sativa HOM05D007434 ORTHO05D009541 3.3e-06 55.1 79 39.2
QL06p042091 Quercus lobata HOM05D008581 ORTHO05D009966 5.6e-06 54.3 104 37.5
ClCG01G016730 Citrullus lanatus HOM05D007434 ORTHO05D009541 7.3e-06 53.9 89 38.2
Prupe.7G136000 Prunus persica HOM05D007434 ORTHO05D009541 7.3e-06 53.9 91 35.2
MELO3C007552.2 Cucumis melo HOM05D007434 ORTHO05D009541 9.6e-06 53.5 83 41.0
Lalb_Chr05g0226641 Lupinus albus HOM05D007434 ORTHO05D009541 9.6e-06 53.5 93 40.9
QL06p042046 Quercus lobata HOM05D008581 ORTHO05D009966 9.6e-06 53.5 104 37.5


User provided reference genes

Program Settings