Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G245500 Phaseolus vulgaris HOM05D007434 ORTHO05D009541 9.0e-38 159.8 85 100.0
Glyma.17G176700 Glycine max HOM05D007434 ORTHO05D009541 1.4e-22 109.4 85 72.9
Glyma.05G084000 Glycine max HOM05D007434 ORTHO05D009541 1.0e-20 103.2 85 70.6
Lalb_Chr05g0226641 Lupinus albus HOM05D007434 ORTHO05D009541 2.4e-14 82.0 84 50.0
Lj4g0021906 Lotus japonicus HOM05D007434 ORTHO05D009541 5.3e-14 80.9 86 55.8
Lalb_Chr09g0333721 Lupinus albus HOM05D007434 ORTHO05D009541 1.7e-12 75.9 84 50.0
TPR.G19016 Trifolium pratense HOM05D007434 ORTHO05D009541 2.9e-12 75.1 88 53.4
Glyma.11G057300 Glycine max HOM05D007434 ORTHO05D009541 3.8e-12 74.7 87 56.3
Glyma.01G184900 Glycine max HOM05D007434 ORTHO05D009541 1.1e-11 73.2 87 54.0
Lj2g0026149 Lotus japonicus HOM05D007434 ORTHO05D009541 3.2e-11 71.6 87 48.3
Medtr5g017710 Medicago truncatula HOM05D007434 ORTHO05D009541 3.2e-11 71.6 86 51.2
Lalb_Chr09g0323081 Lupinus albus HOM05D007434 ORTHO05D009541 5.5e-11 70.9 87 51.7
Lalb_Chr05g0213231 Lupinus albus HOM05D007434 ORTHO05D009541 3.6e-10 68.2 86 48.8
DCAR_010906 Daucus carota HOM05D007434 ORTHO05D009541 4.6e-10 67.8 92 43.5
TPR.G21269 Trifolium pratense HOM05D007434 ORTHO05D009541 6.1e-10 67.4 86 50.0
Phvul.002G020200 Phaseolus vulgaris HOM05D007434 ORTHO05D009541 7.9e-10 67.0 92 50.0
Atru.chr3.394 Acer truncatum HOM05D007434 ORTHO05D009541 4.3e-08 61.2 91 38.5
Ciclev10027106m.g Citrus clementina HOM05D007434 ORTHO05D009541 4.3e-08 61.2 94 41.5
Gohir.A02G159900 Gossypium hirsutum HOM05D007434 ORTHO05D009541 4.3e-08 61.2 97 46.4
Gohir.D03G020700 Gossypium hirsutum HOM05D007434 ORTHO05D009541 4.3e-08 61.2 97 46.4
Gorai.003G021800 Gossypium raimondii HOM05D007434 ORTHO05D009541 1.7e-07 59.3 91 49.5
Sed0015330 Sechium edule HOM05D007434 ORTHO05D009541 2.2e-07 58.9 83 43.4
arahy.Tifrunner.gnm1.ann1.T0173K Arachis hypogaea HOM05D007434 ORTHO05D009541 2.8e-07 58.5 81 45.7
Prupe.7G136000 Prunus persica HOM05D007434 ORTHO05D009541 4.8e-07 57.8 77 41.6
Cpa.g.sc55.176 Carica papaya HOM05D007434 ORTHO05D009541 6.3e-07 57.4 86 44.2
QL06p042177 Quercus lobata HOM05D007434 ORTHO05D009541 1.4e-06 56.2 86 40.7
Atru.chr3.392 Acer truncatum HOM05D007434 ORTHO05D009541 2.4e-06 55.5 89 40.4
HanXRQChr12g0379321 Helianthus annuus HOM05D021427 ORTHO05D022523 2.4e-06 55.5 88 40.9
Aqoxy6G01381 Aquilegia oxysepala HOM05D007434 ORTHO05D009541 3.1e-06 55.1 80 42.5
Nn1g05850 Nelumbo nucifera HOM05D007434 ORTHO05D009541 4.1e-06 54.7 88 39.8
Potri.007G041500 Populus trichocarpa HOM05D007434 ORTHO05D009541 4.1e-06 54.7 89 38.2
COL.COLO4_11386 Corchorus olitorius HOM05D007434 ORTHO05D009541 5.3e-06 54.3 86 39.5
FvH4_1g15740 Fragaria vesca HOM05D007434 ORTHO05D009541 5.3e-06 54.3 97 39.2
FAN23G2206 Fragaria x ananassa HOM05D007434 ORTHO05D009541 6.9e-06 53.9 99 39.4


User provided reference genes

Program Settings