Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G245400 Phaseolus vulgaris HOM05D008581 ORTHO05D009966 2.6e-49 198.4 98 100.0
Lalb_Chr05g0213241 Lupinus albus HOM05D008581 ORTHO05D011864 6.7e-21 104.0 104 55.8
Glyma.17G176900 Glycine max HOM05D008581 ORTHO05D009966 1.8e-18 95.9 108 54.6
Lalb_Chr16g0378261 Lupinus albus HOM05D008581 ORTHO05D011864 2.4e-18 95.5 97 56.7
Lalb_Chr16g0378441 Lupinus albus HOM05D008581 ORTHO05D011864 2.4e-18 95.5 97 56.7
Glyma.11G057100 Glycine max HOM05D008581 ORTHO05D011864 5.3e-18 94.4 98 51.0
TPR.G745 Trifolium pratense HOM05D008581 ORTHO05D009966 3.5e-17 91.7 113 49.6
Ca_21178_v3 Cicer arietinum L. HOM05D008581 ORTHO05D009966 2.5e-15 85.5 110 50.9
Ca_22185_v3 Cicer arietinum L. HOM05D008581 ORTHO05D009966 2.5e-15 85.5 110 50.9
Glyma.01G185100 Glycine max HOM05D008581 ORTHO05D009966 3.2e-15 85.1 101 47.5
Psat4g087360 Pisum sativum HOM05D008581 ORTHO05D011864 1.6e-14 82.8 112 45.5
VMungo1215G0067 Vigna mungo HOM05D008581 ORTHO05D011864 5.2e-13 77.8 102 51.0
Phvul.002G020000 Phaseolus vulgaris HOM05D008581 ORTHO05D011864 2.6e-12 75.5 99 49.5
TPR.G19008 Trifolium pratense HOM05D010906 ORTHO05D011864 6.3e-11 70.9 106 45.3
QL06p042046 Quercus lobata HOM05D008581 ORTHO05D009966 2.7e-09 65.5 111 36.0
Eucgr.I00949 Eucalyptus grandis HOM05D022674 ORTHO05D009966 3.5e-09 65.1 68 50.0
Eucgr.I00950 Eucalyptus grandis HOM05D022674 ORTHO05D009966 3.5e-09 65.1 126 33.3
Manes.12G100000 Manihot esculenta HOM05D008581 ORTHO05D009966 3.5e-09 65.1 123 37.4
Gohir.A02G159700 Gossypium hirsutum HOM05D013202 ORTHO05D009966 4.5e-09 64.7 98 39.8
QL06p042091 Quercus lobata HOM05D008581 ORTHO05D009966 5.9e-09 64.3 111 35.1
QL06p042132 Quercus lobata HOM05D008581 ORTHO05D009966 7.7e-09 63.9 120 37.5
Sabra07G0037300 Salix brachista HOM05D008581 ORTHO05D009966 7.7e-09 63.9 113 40.7
Lsat_1_v5_gn_4_167560 Lactuca sativa HOM05D008581 ORTHO05D009966 1.0e-08 63.5 103 37.9
Cfa004000 Carpinus fangiana HOM05D008581 ORTHO05D009966 1.3e-08 63.2 116 38.8
Lj7C67G2 Lonicera japonica HOM05D008581 ORTHO05D009966 1.7e-08 62.8 110 40.9
Ciclev10027209m.g Citrus clementina HOM05D008581 ORTHO05D009966 2.2e-08 62.4 121 35.5
Gorai.003G022300 Gossypium raimondii HOM05D013202 ORTHO05D009966 2.2e-08 62.4 98 38.8
Lj7C64T2 Lonicera japonica HOM05D008581 ORTHO05D009966 2.2e-08 62.4 104 40.4
Atru.chr3.367 Acer truncatum HOM05D008581 ORTHO05D009966 5.0e-08 61.2 126 34.9
Lj7C67T5 Lonicera japonica HOM05D008581 ORTHO05D009966 5.0e-08 61.2 113 40.7
arahy.Tifrunner.gnm1.ann1.HVX4VE Arachis hypogaea HOM05D010906 ORTHO05D011864 6.5e-08 60.8 98 41.8
Lj7C67T3 Lonicera japonica HOM05D008581 ORTHO05D009966 6.5e-08 60.8 106 41.5
Lj4g0014874 Lotus japonicus HOM05D008581 ORTHO05D011864 6.5e-08 60.8 103 43.7
DCAR_025723 Daucus carota HOM05D008581 ORTHO05D009966 8.5e-08 60.5 118 38.1
MELO3C007553.2 Cucumis melo HOM05D022436 ORTHO05D009966 1.1e-07 60.1 108 37.0
Rhsim10G0119400 Rhododendron simsii HOM05D008581 ORTHO05D009966 1.1e-07 60.1 131 36.6
ClCG01G016740 Citrullus lanatus HOM05D022436 ORTHO05D009966 1.9e-07 59.3 106 42.5
COL.COLO4_11388 Corchorus olitorius HOM05D008581 ORTHO05D009966 1.9e-07 59.3 117 35.9
ECA232G4194 Erigeron canadensis HOM05D008581 ORTHO05D009966 2.5e-07 58.9 62 51.6
Thecc.01G053400 Theobroma cacao HOM05D008581 ORTHO05D009966 2.5e-07 58.9 119 34.5
Potri.005G136800 Populus trichocarpa HOM05D008581 ORTHO05D009966 4.2e-07 58.2 108 36.1
Atru.chr3.365 Acer truncatum HOM05D008581 ORTHO05D009966 5.5e-07 57.8 123 35.0
Manes.13G126600 Manihot esculenta HOM05D008581 ORTHO05D009966 5.5e-07 57.8 123 34.1
Gohir.A02G159800 Gossypium hirsutum HOM05D013202 ORTHO05D009966 7.2e-07 57.4 98 37.8
arahy.Tifrunner.gnm1.ann1.7MI303 Arachis hypogaea HOM05D010906 ORTHO05D011864 9.4e-07 57.0 98 41.8
Ca_21180_v3 Cicer arietinum L. HOM05D010906 ORTHO05D011864 9.4e-07 57.0 79 46.8
CsaV3_6G043170 Cucumis sativus L. HOM05D022436 ORTHO05D009966 1.2e-06 56.6 109 36.7
Gohir.D03G020800 Gossypium hirsutum HOM05D013202 ORTHO05D009966 1.2e-06 56.6 98 38.8
Gorai.003G022000 Gossypium raimondii HOM05D013202 ORTHO05D009966 1.2e-06 56.6 98 38.8
Dinv39871 Davidia involucrata HOM05D008581 ORTHO05D009966 1.6e-06 56.2 123 35.8
Gorai.003G022200 Gossypium raimondii HOM05D013202 ORTHO05D009966 2.1e-06 55.8 98 38.8
Peaxi162Scf00916g00007 Petunia axillaris HOM05D012691 ORTHO05D009966 2.7e-06 55.5 124 36.3
Nitab4.5_0000310g0110 Nicotiana tabacum HOM05D012691 ORTHO05D009966 3.6e-06 55.1 123 35.0
Ciclev10027212m.g Citrus clementina HOM05D007434 ORTHO05D009541 4.7e-06 54.7 100 41.0
Sed0012386 Sechium edule HOM05D022436 ORTHO05D009966 4.7e-06 54.7 108 38.9
Aqoxy6G01382 Aquilegia oxysepala HOM05D007434 ORTHO05D009541 6.1e-06 54.3 103 38.8


User provided reference genes

Program Settings