Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G243900 Phaseolus vulgaris HOM05D002093 ORTHO05D003877 1.5e-116 422.9 218 100.0
VMungo0251G2600 Vigna mungo HOM05D002093 ORTHO05D003877 5.2e-106 387.9 216 94.4
Glyma.17G174600 Glycine max HOM05D002093 ORTHO05D003877 7.3e-76 287.7 227 76.2
Glyma.05G095666 Glycine max HOM05D002093 ORTHO05D003877 4.4e-73 278.5 230 73.0
Lj4g0019433 Lotus japonicus HOM05D002093 ORTHO05D003877 3.5e-46 189.1 403 39.2
QL06p041362 Quercus lobata HOM05D002093 ORTHO05D003877 1.4e-42 177.2 403 38.0
TAR628G1162 Trochodendron aralioides HOM05D002093 ORTHO05D003877 4.1e-42 175.6 407 36.1
arahy.Tifrunner.gnm1.ann1.31X1J3 Arachis hypogaea HOM05D002093 ORTHO05D003877 5.3e-42 175.3 401 37.7
CiPaw.01G018000 Carya illinoinensis HOM05D002093 ORTHO05D003877 5.3e-42 175.3 404 37.6
arahy.Tifrunner.gnm1.ann1.KYX91V Arachis hypogaea HOM05D002093 ORTHO05D003877 6.9e-42 174.9 401 37.7
Cfa004024 Carpinus fangiana HOM05D002093 ORTHO05D003877 9.0e-42 174.5 404 37.4
Ca_22163_v3 Cicer arietinum L. HOM05D002093 ORTHO05D003877 9.0e-42 174.5 399 37.3
Haze_15397 Corylus avellana HOM05D002093 ORTHO05D003877 9.0e-42 174.5 404 37.4
Manes.13G124200 Manihot esculenta HOM05D002093 ORTHO05D003877 1.2e-41 174.1 404 36.4
Manes.12G106900 Manihot esculenta HOM05D002093 ORTHO05D003877 2.6e-41 172.9 404 36.1
CANSAT01G0818 Cannabis sativa HOM05D002093 ORTHO05D003877 3.4e-41 172.6 408 36.5
SalBow1G1545 Salvia bowleyana HOM05D002093 ORTHO05D003877 5.9e-41 171.8 345 39.1
Psat0s1281g0040 Pisum sativum HOM05D002093 ORTHO05D003877 7.6e-41 171.4 400 36.8
COL.COLO4_11417 Corchorus olitorius HOM05D002093 ORTHO05D003877 1.3e-40 170.6 403 36.2
Duzib147G0327 Durio zibethinus HOM05D002093 ORTHO05D003877 1.3e-40 170.6 403 36.0
Thecc.01G056400 Theobroma cacao HOM05D002093 ORTHO05D003877 1.7e-40 170.2 403 36.7
Dinv39847 Davidia involucrata HOM05D002093 ORTHO05D003877 2.2e-40 169.9 402 35.8
Sabra07G0038900 Salix brachista HOM05D002093 ORTHO05D003877 2.9e-40 169.5 402 36.1
Actinidia16482 Actinidia chinensis HOM05D002093 ORTHO05D003877 3.8e-40 169.1 403 36.2
Ciclev10025785m.g Citrus clementina HOM05D002093 ORTHO05D003877 5.0e-40 168.7 401 35.7
Phvul.002G018800 Phaseolus vulgaris HOM05D002093 ORTHO05D003877 5.0e-40 168.7 401 35.7
CiPaw.02G008200 Carya illinoinensis HOM05D002093 ORTHO05D003877 1.4e-39 167.2 404 36.4
THA.LOC104827141 Tarenaya hassleriana HOM05D002093 ORTHO05D003877 1.9e-39 166.8 403 35.2
VMungo1215G2131 Vigna mungo HOM05D002093 ORTHO05D003877 2.5e-39 166.4 400 35.5
Sed0011926 Sechium edule HOM05D002093 ORTHO05D003877 7.2e-39 164.9 376 36.2
Lalb_Chr09g0323191 Lupinus albus HOM05D002093 ORTHO05D003877 9.3e-39 164.5 394 35.3
Lalb_Chr16g0378551 Lupinus albus HOM05D002093 ORTHO05D003877 9.3e-39 164.5 397 34.8
TWI73G0884 Tripterygium wilfordii HOM05D002093 ORTHO05D003877 9.3e-39 164.5 401 36.2
Lj2g0008573 Lotus japonicus HOM05D002093 ORTHO05D003877 1.2e-38 164.1 399 34.8
ClCG02G012510 Citrullus lanatus HOM05D002093 ORTHO05D003877 1.6e-38 163.7 399 34.1
Migut.K00766 Erythranthe guttata HOM05D002093 ORTHO05D003877 1.6e-38 163.7 389 35.0
Glyma.11G055900 Glycine max HOM05D002093 ORTHO05D003877 2.7e-38 162.9 401 34.2
Gohir.D12G069400 Gossypium hirsutum HOM05D002093 ORTHO05D003877 2.7e-38 162.9 402 35.1
PGSC0003DMG400004041 Solanum tuberosum HOM05D002093 ORTHO05D003877 2.7e-38 162.9 402 34.8
Glyma.01G186100 Glycine max HOM05D002093 ORTHO05D003877 3.6e-38 162.5 398 34.2
Potri.007G044200 Populus trichocarpa HOM05D002093 ORTHO05D003877 3.6e-38 162.5 405 35.1
CSS0045673 Camellia sinensis var. sinensis HOM05D002093 ORTHO05D003877 4.6e-38 162.2 405 35.3
Duzib187G1344 Durio zibethinus HOM05D002093 ORTHO05D003877 6.1e-38 161.8 403 35.2
Gohir.A11G192500 Gossypium hirsutum HOM05D002093 ORTHO05D003877 6.1e-38 161.8 403 35.0
Gorai.008G076000 Gossypium raimondii HOM05D002093 ORTHO05D003877 6.1e-38 161.8 402 35.1
Solyc02g090870.1 Solanum lycopersicum HOM05D002093 ORTHO05D003877 6.1e-38 161.8 402 34.8
Sopen02g035520 Solanum pennellii HOM05D002093 ORTHO05D003877 6.1e-38 161.8 402 34.8
CARHR159800 Cardamine hirsuta HOM05D002093 ORTHO05D003877 1.3e-37 160.6 405 34.6
Thhalv10010424m.g Eutrema salsugineum HOM05D002093 ORTHO05D003877 1.3e-37 160.6 404 33.9
Cpa.g.sc55.147 Carica papaya HOM05D002093 ORTHO05D003877 1.8e-37 160.2 402 35.3
AL5G30460 Arabidopsis lyrata HOM05D002093 ORTHO05D003877 2.3e-37 159.8 404 34.4
AT3G50340 Arabidopsis thaliana HOM05D002093 ORTHO05D003877 2.3e-37 159.8 404 34.4
Carub.0005s1665 Capsella rubella HOM05D002093 ORTHO05D003877 2.3e-37 159.8 403 34.7
Gohir.A12G070900 Gossypium hirsutum HOM05D002093 ORTHO05D003877 2.3e-37 159.8 402 34.6
PGR004G1935 Punica granatum HOM05D002093 ORTHO05D003877 3.9e-37 159.1 403 36.0
Sp5g11850 Schrenkiella parvula HOM05D002093 ORTHO05D003877 5.1e-37 158.7 404 33.4
Gohir.D11G199200 Gossypium hirsutum HOM05D002093 ORTHO05D003877 6.7e-37 158.3 403 34.7
TWI09G1584 Tripterygium wilfordii HOM05D002093 ORTHO05D003877 6.7e-37 158.3 403 36.2
SalBow5G0755 Salvia bowleyana HOM05D002093 ORTHO05D003877 8.7e-37 157.9 349 35.8
SalBow5G4513 Salvia bowleyana HOM05D002093 ORTHO05D003877 8.7e-37 157.9 349 35.8
MELO3C020873.2 Cucumis melo HOM05D002093 ORTHO05D003877 1.1e-36 157.5 399 33.6
Migut.H00432 Erythranthe guttata HOM05D002093 ORTHO05D003877 1.1e-36 157.5 404 34.7
Gorai.007G213400 Gossypium raimondii HOM05D002093 ORTHO05D003877 1.1e-36 157.5 403 34.7
MBI03_g13471_MAGBIO Magnolia biondii HOM05D002093 ORTHO05D003877 1.1e-36 157.5 394 34.3
Potri.005G138300 Populus trichocarpa HOM05D002093 ORTHO05D003877 1.5e-36 157.1 406 35.0
Cc07_g06000 Coffea canephora HOM05D002093 ORTHO05D003877 1.9e-36 156.8 409 34.5
Sabra05G0112200 Salix brachista HOM05D002093 ORTHO05D003877 1.9e-36 156.8 405 34.3
ClCG01G016830 Citrullus lanatus HOM05D002093 ORTHO05D003877 3.3e-36 156.0 397 35.3
Psat2g167200 Pisum sativum HOM05D002093 ORTHO05D003877 3.3e-36 156.0 400 34.8
Nitab4.5_0002440g0020 Nicotiana tabacum HOM05D002093 ORTHO05D003877 4.3e-36 155.6 404 34.2
BcaC09g50022 Brassica carinata HOM05D002093 ORTHO05D003877 5.7e-36 155.2 400 33.0
C01p29900 Brassica napus HOM05D002093 ORTHO05D003877 5.7e-36 155.2 400 33.0
BolC1t02932H Brassica oleracea HOM05D002093 ORTHO05D003877 5.7e-36 155.2 400 33.0
Nitab4.5_0002016g0100 Nicotiana tabacum HOM05D002093 ORTHO05D003877 5.7e-36 155.2 404 34.2
Ca_24769_v3 Cicer arietinum L. HOM05D002093 ORTHO05D003877 9.7e-36 154.5 388 35.1
CsaV3_2G016640 Cucumis sativus L. HOM05D002093 ORTHO05D003877 9.7e-36 154.5 397 33.2
CAN.G660.8 Capsicum annuum HOM05D002093 ORTHO05D003877 1.3e-35 154.1 399 33.3
AT5G67020 Arabidopsis thaliana HOM05D002093 ORTHO05D003877 2.2e-35 153.3 398 34.9
Hma1.2p1_1705F.1_g298390 Hydrangea macrophylla HOM05D002093 ORTHO05D003877 2.8e-35 152.9 404 35.1
Sed0009898 Sechium edule HOM05D002093 ORTHO05D003877 2.8e-35 152.9 364 34.6
BcaB05g23211 Brassica carinata HOM05D002093 ORTHO05D003877 6.3e-35 151.8 404 32.7
BraA09t39804Z Brassica rapa HOM05D002093 ORTHO05D003877 8.2e-35 151.4 403 33.5
MELO3C000152.2 Cucumis melo HOM05D002093 ORTHO05D003877 8.2e-35 151.4 397 34.0
Medtr5g017410 Medicago truncatula HOM05D002093 ORTHO05D003877 1.1e-34 151.0 398 34.2
BcaC07g39493 Brassica carinata HOM05D002093 ORTHO05D003877 1.4e-34 150.6 404 33.2
C08p25380 Brassica napus HOM05D002093 ORTHO05D003877 1.4e-34 150.6 404 33.2
BolC8t50159H Brassica oleracea HOM05D002093 ORTHO05D003877 1.4e-34 150.6 404 33.2
Actinidia36495 Actinidia chinensis HOM05D002093 ORTHO05D003877 2.4e-34 149.8 384 35.7
Peaxi162Scf00450g00035 Petunia axillaris HOM05D002093 ORTHO05D003877 2.4e-34 149.8 410 32.7
CsaV3_6G043270 Cucumis sativus L. HOM05D002093 ORTHO05D003877 3.1e-34 149.4 397 33.5
TPR.G30703 Trifolium pratense HOM05D002093 ORTHO05D003877 3.1e-34 149.4 405 33.3
Rhsim08G0100300 Rhododendron simsii HOM05D002093 ORTHO05D003877 4.1e-34 149.1 403 33.5
CSS0014053 Camellia sinensis var. sinensis HOM05D002093 ORTHO05D003877 5.3e-34 148.7 192 52.1
Atru.chr3.326 Acer truncatum HOM05D002093 ORTHO05D003877 6.9e-34 148.3 157 56.7
Oeu018957.1 Olea europaea HOM05D002093 ORTHO05D003877 6.9e-34 148.3 402 33.3
TPR.G19073 Trifolium pratense HOM05D002093 ORTHO05D003877 9.1e-34 147.9 186 52.2
Lj7A69T48 Lonicera japonica HOM05D002093 ORTHO05D003877 1.2e-33 147.5 403 32.5
MSTRG.23745 Avicennia marina HOM05D002093 ORTHO05D003877 2.6e-33 146.4 407 33.7
A01p24190 Brassica napus HOM05D002093 ORTHO05D003877 3.4e-33 146.0 404 31.9
A09p43350 Brassica napus HOM05D002093 ORTHO05D003877 3.4e-33 146.0 403 33.0
BraA01t02331Z Brassica rapa HOM05D002093 ORTHO05D003877 3.4e-33 146.0 404 31.9
AL8G44340 Arabidopsis lyrata HOM05D002093 ORTHO05D003877 5.9e-33 145.2 398 33.7
MSTRG.2884 Avicennia marina HOM05D002093 ORTHO05D003877 5.9e-33 145.2 403 33.0
MSTRG.3425 Avicennia marina HOM05D002093 ORTHO05D003877 5.9e-33 145.2 401 31.9
TAR381G1348 Trochodendron aralioides HOM05D002093 ORTHO05D003877 5.9e-33 145.2 410 32.9
PGR102G1838 Punica granatum HOM05D002093 ORTHO05D003877 7.7e-33 144.8 402 33.3
Rhsim10G0117500 Rhododendron simsii HOM05D002093 ORTHO05D003877 1.3e-32 144.1 387 33.9
Lsat_1_v5_gn_4_166281 Lactuca sativa HOM05D002093 ORTHO05D003877 1.7e-32 143.7 407 32.2
AUR62001927 Chenopodium quinoa HOM05D002093 ORTHO05D003877 2.9e-32 142.9 398 33.4
Aa31LG4G18570 Aethionema arabicum HOM05D002093 ORTHO05D003877 3.8e-32 142.5 381 32.8
arahy.Tifrunner.gnm1.ann1.6LZ9WW Arachis hypogaea HOM05D002093 ORTHO05D003877 3.8e-32 142.5 382 34.6
DCAR_025734 Daucus carota HOM05D002093 ORTHO05D003877 8.5e-32 141.4 396 32.8
Sp2g29650 Schrenkiella parvula HOM05D002093 ORTHO05D003877 1.9e-31 140.2 399 33.6
MSTRG.15388 Avicennia marina HOM05D002093 ORTHO05D003877 2.5e-31 139.8 403 31.3
AUR62003883 Chenopodium quinoa HOM05D002093 ORTHO05D003877 2.5e-31 139.8 184 49.5
Eucgr.H02035 Eucalyptus grandis HOM05D002093 ORTHO05D003877 2.5e-31 139.8 386 32.1
Sed0000549 Sechium edule HOM05D002093 ORTHO05D003877 2.5e-31 139.8 399 33.6
GSVIVG01022129001 Vitis vinifera HOM05D002093 ORTHO05D003877 2.5e-31 139.8 341 35.2
Oeu031527.1 Olea europaea HOM05D002093 ORTHO05D003877 3.2e-31 139.4 356 34.8
Ah.02g124300 Amaranthus hybridus HOM05D002093 ORTHO05D003877 4.2e-31 139.0 403 31.8
BcaB01g00624 Brassica carinata HOM05D002093 ORTHO05D003877 4.2e-31 139.0 404 31.7
arahy.Tifrunner.gnm1.ann1.R7X80S Arachis hypogaea HOM05D002093 ORTHO05D003877 5.5e-31 138.7 382 34.0
TAR625G0453 Trochodendron aralioides HOM05D002093 ORTHO05D003877 7.2e-31 138.3 402 32.8
HanXRQChr09g0263831 Helianthus annuus HOM05D002093 ORTHO05D003877 1.2e-30 137.5 401 31.4
Aqoxy6G01309 Aquilegia oxysepala HOM05D002093 ORTHO05D003877 1.6e-30 137.1 419 31.7
Sc03g0001590 Simmondsia chinensis HOM05D002093 ORTHO05D003877 2.7e-30 136.3 403 31.5
Gohir.D03G023700 Gossypium hirsutum HOM05D002093 ORTHO05D003877 4.6e-30 135.6 404 32.7
Gorai.003G025200 Gossypium raimondii HOM05D002093 ORTHO05D003877 4.6e-30 135.6 404 32.7
CARHR280640 Cardamine hirsuta HOM05D002093 ORTHO05D003877 1.4e-29 134.0 404 32.4
MD15G1284400 Malus domestica HOM05D002093 ORTHO05D003877 1.4e-29 134.0 412 31.6
FvH4_1g16070 Fragaria vesca HOM05D002093 ORTHO05D003877 3.9e-29 132.5 411 31.6
FAN19G2882 Fragaria x ananassa HOM05D002093 ORTHO05D003877 3.9e-29 132.5 411 31.6
FAN23G2320 Fragaria x ananassa HOM05D002093 ORTHO05D003877 3.9e-29 132.5 411 31.9
FAN26G2318 Fragaria x ananassa HOM05D002093 ORTHO05D003877 3.9e-29 132.5 411 31.6
PSO675G7228 Papaver somniferum HOM05D002093 ORTHO05D003877 3.9e-29 132.5 422 31.0
Prupe.7G133200 Prunus persica HOM05D002093 ORTHO05D003877 8.8e-29 131.3 413 31.7
RcHm_v2.0_Chr2g0105691 Rosa chinensis HOM05D002093 ORTHO05D003877 8.8e-29 131.3 411 31.9
Oeu031528.1 Olea europaea HOM05D002093 ORTHO05D003877 1.1e-28 131.0 402 32.6
FAN28G1260 Fragaria x ananassa HOM05D002093 ORTHO05D003877 1.5e-28 130.6 411 31.4
MD02G1172200 Malus domestica HOM05D002093 ORTHO05D003877 2.6e-28 129.8 412 31.1
EL10Ac6g15743 Beta vulgaris HOM05D002093 ORTHO05D003877 3.3e-28 129.4 185 45.9
PSO541G0340 Papaver somniferum HOM05D002093 ORTHO05D003877 7.4e-28 128.3 422 30.6
Gohir.A02G157200 Gossypium hirsutum HOM05D002093 ORTHO05D003877 1.3e-27 127.5 404 31.9
vmacro05338 Vaccinium macrocarpon HOM05D002093 ORTHO05D003877 1.7e-27 127.1 118 57.6
TWI53G0455 Tripterygium wilfordii HOM05D002093 ORTHO05D003877 2.2e-27 126.7 398 32.7
Oeu031953.1 Olea europaea HOM05D002093 ORTHO05D003877 3.7e-27 125.9 116 57.8
ECA232G3993 Erigeron canadensis HOM05D002093 ORTHO05D003877 4.8e-27 125.6 397 29.2
Actinidia12051 Actinidia chinensis HOM05D002093 ORTHO05D003877 2.4e-26 123.2 323 35.6
A07p16910 Brassica napus HOM05D002093 ORTHO05D003877 3.1e-26 122.9 389 30.6
Carub.0008s2748 Capsella rubella HOM05D002093 ORTHO05D003877 9.1e-26 121.3 405 31.1
BraA07t29417Z Brassica rapa HOM05D002093 ORTHO05D003877 1.5e-25 120.6 389 30.3
CDE03G0206 Ceratophyllum demersum HOM05D002093 ORTHO05D003877 1.5e-25 120.6 401 30.9
CDE04G2094 Ceratophyllum demersum HOM05D002093 ORTHO05D003877 2.0e-25 120.2 401 29.9
C07p24730 Brassica napus HOM05D002093 ORTHO05D003877 7.7e-25 118.2 389 29.6
BolC7t42993H Brassica oleracea HOM05D002093 ORTHO05D003877 7.7e-25 118.2 389 29.6
Lj4C149T6 Lonicera japonica HOM05D002093 ORTHO05D003877 1.7e-24 117.1 118 54.2
HanXRQChr15g0490521 Helianthus annuus HOM05D002093 ORTHO05D003877 2.2e-24 116.7 410 30.5
THA.LOC104821255 Tarenaya hassleriana HOM05D002093 ORTHO05D003877 2.9e-24 116.3 397 29.5
PSO210G1107 Papaver somniferum HOM05D002093 ORTHO05D003877 6.5e-24 115.2 161 41.0
PSO170G6176 Papaver somniferum HOM05D002093 ORTHO05D003877 1.4e-23 114.0 120 47.5
BcaC06g34778 Brassica carinata HOM05D002093 ORTHO05D003877 1.9e-23 113.6 126 49.2
ATR0009G029 Amborella trichopoda HOM05D002093 ORTHO05D003877 2.5e-23 113.2 147 42.9
Aa31LG1G15550 Aethionema arabicum HOM05D002093 ORTHO05D003877 4.2e-23 112.5 384 28.6
HPP92_016719 Vanilla planifolia HOM05D002093 ORTHO05D003877 9.4e-23 111.3 397 29.5
Os08g0472400 Oryza sativa ssp. japonica HOM05D002093 ORTHO05D003877 9.7e-20 101.3 125 44.0
Zm00001eb038030 Zea mays HOM05D002093 ORTHO05D003877 2.8e-19 99.8 123 43.1
unitig_899.g14941 Utricularia gibba HOM05D002093 ORTHO05D003877 3.7e-19 99.4 178 38.2
unitig_899.g14664 Utricularia gibba HOM05D002093 ORTHO05D003877 8.2e-19 98.2 381 28.9
BcaC06g34779 Brassica carinata HOM05D002093 ORTHO05D003877 1.4e-18 97.4 367 28.3
Zm00001eb176690 Zea mays HOM05D002093 ORTHO05D003877 1.8e-18 97.1 118 44.9
Os09g0456700 Oryza sativa ssp. japonica HOM05D002093 ORTHO05D003877 5.3e-18 95.5 118 41.5
SGA_v2.0_scaffold15G07304 Striga asiatica HOM05D002093 ORTHO05D003877 3.5e-17 92.8 249 36.1
unitig_736.g22665 Utricularia gibba HOM05D002093 ORTHO05D003877 4.7e-14 82.4 114 41.2
Zm00001eb314880 Zea mays HOM05D002093 ORTHO05D003877 6.1e-14 82.0 201 28.4
CDE08G0082 Ceratophyllum demersum HOM05D002093 ORTHO05D003877 1.4e-13 80.9 112 42.0
Oeu031526.1 Olea europaea HOM05D002093 ORTHO05D003877 5.2e-13 79.0 246 35.0
Eucgr.I00924 Eucalyptus grandis HOM05D002093 ORTHO05D003877 1.2e-12 77.8 322 28.9
Oeu031954.1 Olea europaea HOM05D002093 ORTHO05D003877 4.8e-11 72.4 60 68.3
C07p24720 Brassica napus HOM05D002093 ORTHO05D003877 2.4e-10 70.1 73 53.4
SEGI_36257 Sequoiadendron giganteum HOM05D002093 ORTHO05D003877 2.7e-09 66.6 109 33.0
Lj4C149T5 Lonicera japonica HOM05D002093 ORTHO05D003877 7.7e-09 65.1 60 60.0
Os03g0396000 Oryza sativa ssp. japonica HOM05D002093 ORTHO05D003877 7.7e-09 65.1 112 33.0
Pp3c10_11830 Physcomitrium patens HOM05D002093 ORTHO05D003877 7.7e-09 65.1 124 34.7
Pp3c23_14360 Physcomitrium patens HOM05D002093 ORTHO05D003877 7.2e-07 58.5 82 37.8
ClCG02G005190 Citrullus lanatus HOM05D002093 ORTHO05D003877 4.7e-06 55.8 149 33.6


User provided reference genes

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