Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G238200 Phaseolus vulgaris HOM05D008801 ORTHO05D010819 1.2e-35 154.1 211 100.0
VMungo0251G0048 Vigna mungo HOM05D008801 ORTHO05D010819 1.5e-25 120.6 220 84.1
Glyma.05G102100 Glycine max HOM05D008801 ORTHO05D010819 1.2e-22 110.9 212 74.5
Ca_24714_v3 Cicer arietinum L. HOM05D008801 ORTHO05D010819 6.3e-16 88.6 59 83.1
Ca_24729_v3 Cicer arietinum L. HOM05D008801 ORTHO05D010819 6.3e-16 88.6 59 83.1
arahy.Tifrunner.gnm1.ann1.N2JMJ4 Arachis hypogaea HOM05D008801 ORTHO05D010819 2.6e-14 83.2 58 79.3
Glyma.11G051300 Glycine max HOM05D008801 ORTHO05D010819 2.6e-14 83.2 59 79.7
Glyma.01G190900 Glycine max HOM05D008801 ORTHO05D010819 1.0e-13 81.3 59 78.0
Phvul.002G014100 Phaseolus vulgaris HOM05D008801 ORTHO05D010819 2.2e-13 80.1 59 74.6
arahy.Tifrunner.gnm1.ann1.EBVI20 Arachis hypogaea HOM05D008801 ORTHO05D010819 1.1e-12 77.8 61 75.4
VMungo1215G0318 Vigna mungo HOM05D008801 ORTHO05D010819 1.1e-12 77.8 59 72.9
Gohir.A11G218200 Gossypium hirsutum HOM05D008801 ORTHO05D010819 5.5e-12 75.5 58 72.4
TPR.G26876 Trifolium pratense HOM05D008801 ORTHO05D010819 7.2e-12 75.1 59 71.2
Ciclev10026322m.g Citrus clementina HOM05D008801 ORTHO05D010819 8.0e-11 71.6 59 66.1
Ca_13935_v3 Cicer arietinum L. HOM05D008801 ORTHO05D010819 1.4e-10 70.9 59 71.2
Lalb_Chr05g0213471 Lupinus albus HOM05D008801 ORTHO05D010819 3.0e-10 69.7 59 69.5
Duzib187G0657 Durio zibethinus HOM05D008801 ORTHO05D010819 5.2e-10 68.9 58 65.5
COL.COLO4_11520 Corchorus olitorius HOM05D008801 ORTHO05D010819 1.2e-09 67.8 58 65.5
Thecc.01G067400 Theobroma cacao HOM05D008801 ORTHO05D010819 4.4e-09 65.9 58 63.8
CARHR245850 Cardamine hirsuta HOM05D010159 ORTHO05D012416 5.7e-09 65.5 59 61.0
Gohir.A12G067800 Gossypium hirsutum HOM05D008801 ORTHO05D010819 7.5e-09 65.1 58 63.8
Gohir.A12G068100 Gossypium hirsutum HOM05D008801 ORTHO05D010819 7.5e-09 65.1 58 63.8
Gohir.D12G072500 Gossypium hirsutum HOM05D008801 ORTHO05D010819 7.5e-09 65.1 58 63.8
Gorai.008G079800 Gossypium raimondii HOM05D008801 ORTHO05D010819 7.5e-09 65.1 58 63.8
Gorai.008G079900 Gossypium raimondii HOM05D008801 ORTHO05D010819 7.5e-09 65.1 58 63.8
THA.LOC104807612 Tarenaya hassleriana HOM05D008801 ORTHO05D010819 4.8e-08 62.4 58 58.6
Duzib264G0993 Durio zibethinus HOM05D008801 ORTHO05D010819 6.3e-08 62.0 58 63.8
Gohir.D12G072600 Gossypium hirsutum HOM05D008801 ORTHO05D010819 6.3e-08 62.0 58 62.1
Carub.0007s0283 Capsella rubella HOM05D010159 ORTHO05D012416 8.3e-08 61.6 59 57.6
Lalb_Chr16g0378731 Lupinus albus HOM05D008801 ORTHO05D010819 1.1e-07 61.2 59 61.0
Glyma.17G164800 Glycine max HOM05D012197 ORTHO05D017034 1.8e-07 60.5 34 88.2
Lj2g0006888 Lotus japonicus HOM05D008801 ORTHO05D010819 1.8e-07 60.5 54 66.7
CSS0031242 Camellia sinensis var. sinensis HOM05D013097 ORTHO05D010819 4.1e-07 59.3 58 55.2
Medtr4g095280 Medicago truncatula HOM05D008801 ORTHO05D010819 5.4e-07 58.9 211 64.0
CSS0039488 Camellia sinensis var. sinensis HOM05D013097 ORTHO05D010819 9.1e-07 58.2 58 53.4
CiPaw.01G008400 Carya illinoinensis HOM05D008801 ORTHO05D010819 9.1e-07 58.2 52 65.4
Manes.12G113000 Manihot esculenta HOM05D008801 ORTHO05D010819 1.6e-06 57.4 58 60.3
AT4G37450 Arabidopsis thaliana HOM05D010159 ORTHO05D012416 2.0e-06 57.0 59 57.6
Medtr5g016250 Medicago truncatula HOM05D008801 ORTHO05D010819 2.0e-06 57.0 59 61.0
Duzib147G0385 Durio zibethinus HOM05D008801 ORTHO05D010819 5.9e-06 55.5 91 57.1


User provided reference genes

Program Settings