Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G237500 Phaseolus vulgaris HOM05D005407 ORTHO05D006544 1.9e-140 503.1 366 100.0
VMungo1011G0001 Vigna mungo HOM05D005407 ORTHO05D006544 1.1e-116 424.1 351 76.4
Glyma.05G103000 Glycine max HOM05D005407 ORTHO05D006544 2.8e-88 329.7 369 65.6
Glyma.17G164300 Glycine max HOM05D005407 ORTHO05D006544 2.0e-78 297.0 368 65.5
TPR.G23890 Trifolium pratense HOM05D005407 ORTHO05D006544 1.2e-54 218.0 362 50.3
Psat4g083080 Pisum sativum HOM05D005407 ORTHO05D006544 2.0e-49 200.7 367 48.0
Lj4g0004383 Lotus japonicus HOM05D005407 ORTHO05D006544 1.7e-45 187.6 330 49.7
Medtr4g095320 Medicago truncatula HOM05D005407 ORTHO05D006544 5.6e-44 182.6 363 55.9
VMungo1215G1030 Vigna mungo HOM05D005407 ORTHO05D006544 4.1e-39 166.4 327 53.8
Phvul.002G013600 Phaseolus vulgaris HOM05D005407 ORTHO05D006544 4.6e-38 162.9 351 51.9
Glyma.11G050800 Glycine max HOM05D005407 ORTHO05D006544 6.6e-37 159.1 328 44.8
Glyma.01G191400 Glycine max HOM05D005407 ORTHO05D006544 3.3e-36 156.8 329 51.4
Duzib187G0216 Durio zibethinus HOM05D005407 ORTHO05D006544 2.6e-33 147.1 390 42.6
arahy.Tifrunner.gnm1.ann1.IRX7P6 Arachis hypogaea HOM05D005407 ORTHO05D006544 1.6e-30 137.9 365 42.2
Duzib147G1232 Durio zibethinus HOM05D005407 ORTHO05D006544 2.7e-30 137.1 361 44.3
Duzib264G0474 Durio zibethinus HOM05D005407 ORTHO05D006544 2.7e-30 137.1 358 39.4
arahy.Tifrunner.gnm1.ann1.UV71K9 Arachis hypogaea HOM05D005407 ORTHO05D006544 4.6e-30 136.3 366 41.8
Thecc.01G067900 Theobroma cacao HOM05D005407 ORTHO05D006544 1.5e-28 131.3 361 42.9
Gohir.A12G074500 Gossypium hirsutum HOM05D005407 ORTHO05D006544 2.1e-27 127.5 370 40.8
Gorai.008G080000 Gossypium raimondii HOM05D005407 ORTHO05D006544 4.7e-27 126.3 341 43.4
QL06p039956 Quercus lobata HOM05D005407 ORTHO05D006544 1.8e-26 124.4 386 39.4
Gohir.D12G072700 Gossypium hirsutum HOM05D005407 ORTHO05D006544 4.0e-26 123.2 379 40.4
Manes.13G114000 Manihot esculenta HOM05D005407 ORTHO05D006544 5.2e-26 122.9 344 40.4
Potri.005G145100 Populus trichocarpa HOM05D005407 ORTHO05D006544 5.2e-26 122.9 400 34.0
Dinv26896 Davidia involucrata HOM05D005407 ORTHO05D006544 8.9e-26 122.1 347 29.7
Gorai.007G220900 Gossypium raimondii HOM05D005407 ORTHO05D006544 1.2e-25 121.7 347 34.9
Actinidia21238 Actinidia chinensis HOM05D005407 ORTHO05D006544 2.0e-25 120.9 349 32.4
Gohir.A11G217700 Gossypium hirsutum HOM05D005407 ORTHO05D006544 2.0e-25 120.9 347 35.2
CiPaw.02G004700 Carya illinoinensis HOM05D005407 ORTHO05D006544 2.6e-25 120.6 357 37.0
Ciclev10025829m.g Citrus clementina HOM05D005407 ORTHO05D006544 2.6e-25 120.6 382 32.5
Gohir.D11G205800 Gossypium hirsutum HOM05D005407 ORTHO05D006544 2.6e-25 120.6 347 35.7
TAR628G1677 Trochodendron aralioides HOM05D005407 ORTHO05D006544 8.4e-24 115.5 322 37.3
Potri.007G051800 Populus trichocarpa HOM05D005407 ORTHO05D006544 1.9e-23 114.4 402 36.8
Cpa.g.sc6.55 Carica papaya HOM05D005407 ORTHO05D006544 2.4e-23 114.0 352 37.2
Gohir.A02G153500 Gossypium hirsutum HOM05D005407 ORTHO05D006544 2.4e-23 114.0 339 37.2
Gohir.D03G026900 Gossypium hirsutum HOM05D005407 ORTHO05D006544 3.2e-23 113.6 331 42.0
Gorai.003G028600 Gossypium raimondii HOM05D005407 ORTHO05D006544 9.2e-23 112.1 331 41.4
Lj2g0008966 Lotus japonicus HOM05D005407 ORTHO05D006544 2.1e-22 110.9 368 32.1
Cfa004094 Carpinus fangiana HOM05D005407 ORTHO05D006544 1.0e-21 108.6 347 41.2
Nn5g30501 Nelumbo nucifera HOM05D005407 ORTHO05D006544 1.0e-21 108.6 350 31.1
Haze_15320 Corylus avellana HOM05D005407 ORTHO05D006544 1.3e-21 108.2 336 39.6
CiPaw.01G007800 Carya illinoinensis HOM05D005407 ORTHO05D006544 1.1e-20 105.1 325 31.4
Sabra07G0045500 Salix brachista HOM05D005407 ORTHO05D006544 3.3e-20 103.6 374 36.6
Oeu040602.1 Olea europaea HOM05D005407 ORTHO05D006544 1.2e-19 101.7 320 34.7
TWI53G1118 Tripterygium wilfordii HOM05D005407 ORTHO05D006544 3.6e-19 100.1 366 39.9
GSVIVG01000158001 Vitis vinifera HOM05D005407 ORTHO05D006544 1.8e-18 97.8 362 30.9
Nn1g04631 Nelumbo nucifera HOM05D005407 ORTHO05D006544 4.0e-18 96.7 317 31.2
Sabra05G0114800 Salix brachista HOM05D005407 ORTHO05D006544 4.0e-18 96.7 313 32.6
Sabra05G0115900 Salix brachista HOM05D005407 ORTHO05D006544 4.0e-18 96.7 313 32.6
Nitab4.5_0007941g0010 Nicotiana tabacum HOM05D005407 ORTHO05D006544 5.2e-18 96.3 328 32.6
Nitab4.5_0003878g0070 Nicotiana tabacum HOM05D005407 ORTHO05D006544 6.9e-18 95.9 328 33.5
Cc07_g06740 Coffea canephora HOM05D005407 ORTHO05D006544 2.0e-17 94.4 322 38.8
Gohir.A10G090300 Gossypium hirsutum HOM05D005407 ORTHO05D006544 5.8e-17 92.8 276 33.7
Solyc02g092720.1 Solanum lycopersicum HOM05D005407 ORTHO05D006544 5.8e-17 92.8 317 32.5
Actinidia32821 Actinidia chinensis HOM05D005407 ORTHO05D006544 7.6e-17 92.4 319 34.8
Gohir.D10G097800 Gossypium hirsutum HOM05D005407 ORTHO05D006544 1.3e-16 91.7 268 35.1
Sopen02g037270 Solanum pennellii HOM05D005407 ORTHO05D006544 1.7e-16 91.3 345 32.8
Manes.12G112400 Manihot esculenta HOM05D005407 ORTHO05D006544 2.2e-16 90.9 341 45.5
Gorai.011G107400 Gossypium raimondii HOM05D005407 ORTHO05D006544 2.9e-16 90.5 268 32.1
Lalb_Chr16g0389101 Lupinus albus HOM05D005407 ORTHO05D006544 6.4e-16 89.4 280 30.7
PGR004G2820 Punica granatum HOM05D005407 ORTHO05D006544 1.1e-15 88.6 349 34.1
MSTRG.2839 Avicennia marina HOM05D005407 ORTHO05D006544 4.2e-15 86.7 323 30.7
CAN.G1075.9 Capsicum annuum HOM05D005407 ORTHO05D006544 1.2e-14 85.1 319 30.1
Prupe.6G224800 Prunus persica HOM05D005407 ORTHO05D006544 1.2e-14 85.1 282 36.5
TWI09G0600 Tripterygium wilfordii HOM05D005407 ORTHO05D006544 1.6e-14 84.7 267 36.7
CsaV3_6G043820 Cucumis sativus L. HOM05D005407 ORTHO05D006544 2.1e-14 84.3 337 29.7
ClCG01G017290 Citrullus lanatus HOM05D005407 ORTHO05D006544 4.6e-14 83.2 347 35.2
Aqoxy6G02765 Aquilegia oxysepala HOM05D005407 ORTHO05D006544 6.0e-14 82.8 195 41.0
MELO3C007607.2 Cucumis melo HOM05D005407 ORTHO05D006544 6.0e-14 82.8 338 35.5
MSTRG.23698 Avicennia marina HOM05D005407 ORTHO05D006544 1.0e-13 82.0 327 30.0
Dinv30062 Davidia involucrata HOM05D005407 ORTHO05D006544 1.3e-13 81.6 277 41.2
PSO675G4008 Papaver somniferum HOM05D005407 ORTHO05D006544 2.3e-13 80.9 264 36.4
Eucgr.I00726 Eucalyptus grandis HOM05D005407 ORTHO05D006544 3.9e-13 80.1 351 33.0
PGSC0003DMG400024943 Solanum tuberosum HOM05D005407 ORTHO05D006544 6.6e-13 79.3 323 31.0
CANSAT01G3084 Cannabis sativa HOM05D005407 ORTHO05D006544 8.7e-13 79.0 355 27.0
vmacro17985 Vaccinium macrocarpon HOM05D005407 ORTHO05D006544 2.5e-12 77.4 143 48.3
CSS0012811 Camellia sinensis var. sinensis HOM05D005407 ORTHO05D006544 3.6e-11 73.6 387 33.3
PSO541G0358 Papaver somniferum HOM05D005407 ORTHO05D006544 1.4e-10 71.6 268 35.4
SalBow1G5175 Salvia bowleyana HOM05D005407 ORTHO05D006544 2.4e-10 70.9 349 30.1
MSTRG.3457 Avicennia marina HOM05D005407 ORTHO05D006544 4.0e-10 70.1 324 30.6
Sed0008783 Sechium edule HOM05D005407 ORTHO05D006544 5.3e-10 69.7 318 30.5
DCAR_021471 Daucus carota HOM05D005407 ORTHO05D006544 6.9e-10 69.3 105 41.9
SGA_v2.0_scaffold15G07407 Striga asiatica HOM05D005407 ORTHO05D006544 1.5e-09 68.2 353 25.8
Lsat_1_v5_gn_4_162000 Lactuca sativa HOM05D005407 ORTHO05D006544 3.4e-09 67.0 322 25.8
MD02G1181700 Malus domestica HOM05D005407 ORTHO05D006544 4.5e-09 66.6 377 31.3
Migut.H00374 Erythranthe guttata HOM05D005407 ORTHO05D006544 1.3e-08 65.1 321 34.6
TAR376G1145 Trochodendron aralioides HOM05D005407 ORTHO05D006544 1.3e-08 65.1 221 43.4
FvH4_1g17130 Fragaria vesca HOM05D005407 ORTHO05D006544 2.9e-08 63.9 360 31.4
Atru.chr3.207 Acer truncatum HOM05D005407 ORTHO05D006544 3.8e-08 63.5 302 41.7
THA.LOC104827519 Tarenaya hassleriana HOM05D005407 ORTHO05D006544 6.4e-08 62.8 346 30.9
EL10Ac6g15663 Beta vulgaris HOM05D005407 ORTHO05D006544 1.9e-07 61.2 246 33.7
CDE07G1425 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 1.9e-07 61.2 200 35.0
FAN19G1545 Fragaria x ananassa HOM05D005407 ORTHO05D006544 1.9e-07 61.2 360 31.1
FAN26G3453 Fragaria x ananassa HOM05D005407 ORTHO05D006544 1.9e-07 61.2 360 31.1
Lsat_1_v5_gn_3_87740 Lactuca sativa HOM05D005407 ORTHO05D006544 1.9e-07 61.2 258 25.6
RcHm_v2.0_Chr2g0107301 Rosa chinensis HOM05D005407 ORTHO05D006544 1.9e-07 61.2 356 31.2
BcaC04g19788 Brassica carinata HOM05D005407 ORTHO05D006544 5.4e-07 59.7 215 29.3
A09p09420 Brassica napus HOM05D005407 ORTHO05D006544 5.4e-07 59.7 327 28.4
C09p51650 Brassica napus HOM05D005407 ORTHO05D006544 5.4e-07 59.7 215 29.3
BolC9t58026H Brassica oleracea HOM05D005407 ORTHO05D006544 5.4e-07 59.7 215 29.3
CDE04G2817 Ceratophyllum demersum HOM05D005407 ORTHO05D006544 5.4e-07 59.7 197 27.9
Peaxi162Scf00365g00076 Petunia axillaris HOM05D005407 ORTHO05D006544 7.1e-07 59.3 334 26.3
ClCG02G012410 Citrullus lanatus HOM05D005407 ORTHO05D006544 9.3e-07 58.9 101 37.6
MD15G1292600 Malus domestica HOM05D005407 ORTHO05D006544 9.3e-07 58.9 287 31.4
Sp2g29310 Schrenkiella parvula HOM05D005407 ORTHO05D006544 1.6e-06 58.2 327 27.2
FAN28G2899 Fragaria x ananassa HOM05D005407 ORTHO05D006544 2.7e-06 57.4 262 32.1
Thhalv10005384m.g Eutrema salsugineum HOM05D005407 ORTHO05D006544 3.5e-06 57.0 231 28.6
FAN23G2725 Fragaria x ananassa HOM05D005407 ORTHO05D006544 3.5e-06 57.0 360 30.3
BraA09t36591Z Brassica rapa HOM05D005407 ORTHO05D006544 4.6e-06 56.6 320 28.8
MELO3C020864.2 Cucumis melo HOM05D005407 ORTHO05D006544 4.6e-06 56.6 69 44.9
CsaV3_2G016540 Cucumis sativus L. HOM05D005407 ORTHO05D006544 4.6e-06 56.6 69 43.5
HanXRQChr12g0373231 Helianthus annuus HOM05D005407 ORTHO05D006544 6.0e-06 56.2 325 29.8
AL8G43980 Arabidopsis lyrata HOM05D005407 ORTHO05D006544 7.9e-06 55.8 224 29.9
unitig_62.g23420 Utricularia gibba HOM05D005407 ORTHO05D006544 7.9e-06 55.8 234 29.1


User provided reference genes

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