Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G233700 Phaseolus vulgaris HOM05D005432 ORTHO05D004599 3.3e-92 341.7 169 100.0
VMungo0251G2573 Vigna mungo HOM05D005432 ORTHO05D004599 1.2e-78 296.6 169 89.9
Glyma.05G107500 Glycine max HOM05D005432 ORTHO05D004599 1.1e-50 203.8 192 62.0
Glyma.17G159600 Glycine max HOM05D005432 ORTHO05D004599 1.0e-45 187.2 196 60.2
Lj4g0003965 Lotus japonicus HOM05D005432 ORTHO05D004599 9.5e-31 137.5 193 50.3
Ca_22097_v3 Cicer arietinum L. HOM05D005432 ORTHO05D004599 1.1e-26 124.0 191 45.5
Medtr4g097280 Medicago truncatula HOM05D005432 ORTHO05D004599 1.3e-24 117.1 191 43.5
Glyma.01G195300 Glycine max HOM05D005432 ORTHO05D004599 2.3e-24 116.3 151 51.0
Medtr4g097350 Medicago truncatula HOM05D005432 ORTHO05D004599 1.9e-23 113.2 191 41.9
Potri.014G006400 Populus trichocarpa HOM05D005432 ORTHO05D004599 2.5e-23 112.8 202 41.6
Glyma.11G046400 Glycine max HOM05D005432 ORTHO05D004599 3.3e-23 112.5 141 50.4
Lalb_Chr05g0225821 Lupinus albus HOM05D005432 ORTHO05D004599 2.1e-22 109.8 194 41.8
Potri.007G006200 Populus trichocarpa HOM05D005432 ORTHO05D004599 6.2e-22 108.2 199 42.2
TPR.G24244 Trifolium pratense HOM05D005432 ORTHO05D004599 6.2e-22 108.2 196 40.8
Medtr4g097360 Medicago truncatula HOM05D005432 ORTHO05D004599 1.4e-21 107.1 184 40.2
Sabra07G0004500 Salix brachista HOM05D005432 ORTHO05D004599 1.4e-21 107.1 193 43.0
Psat4g081760 Pisum sativum HOM05D005432 ORTHO05D004599 2.3e-21 106.3 190 40.0
TPR.G24220 Trifolium pratense HOM05D005432 ORTHO05D004599 5.2e-21 105.1 198 38.9
Thecc.01G075000 Theobroma cacao HOM05D005432 ORTHO05D004599 1.5e-20 103.6 191 41.9
QL06p039087 Quercus lobata HOM05D005432 ORTHO05D004599 1.7e-19 100.1 192 41.1
Sabra14G0006100 Salix brachista HOM05D005432 ORTHO05D004599 2.9e-19 99.4 185 38.4
TPR.G24237 Trifolium pratense HOM05D005432 ORTHO05D004599 3.7e-19 99.0 194 39.7
Duzib187G0823 Durio zibethinus HOM05D005432 ORTHO05D004599 4.9e-19 98.6 190 41.6
VMungo1215G3148 Vigna mungo HOM05D005432 ORTHO05D004599 4.9e-19 98.6 144 44.4
Psat4g081120 Pisum sativum HOM05D005432 ORTHO05D004599 8.3e-19 97.8 102 58.8
Manes.13G109800 Manihot esculenta HOM05D005432 ORTHO05D004599 1.1e-18 97.4 198 38.9
Gohir.A12G078000 Gossypium hirsutum HOM05D005432 ORTHO05D004599 2.7e-17 92.8 192 41.1
MD02G1188600 Malus domestica HOM05D005432 ORTHO05D004599 7.8e-17 91.3 195 36.9
Phvul.002G009700 Phaseolus vulgaris HOM05D005432 ORTHO05D004599 7.8e-17 91.3 140 47.1
Prupe.6G218300 Prunus persica HOM05D005432 ORTHO05D004599 1.0e-16 90.9 197 35.5
Manes.12G116300 Manihot esculenta HOM05D005432 ORTHO05D004599 1.3e-16 90.5 206 39.3
FvH4_1g18020 Fragaria vesca HOM05D005432 ORTHO05D004599 3.0e-16 89.4 190 37.9
FAN19G1119 Fragaria x ananassa HOM05D005432 ORTHO05D004599 3.0e-16 89.4 190 37.9
FAN23G2070 Fragaria x ananassa HOM05D005432 ORTHO05D004599 3.0e-16 89.4 189 37.6
FAN26G1008 Fragaria x ananassa HOM05D005432 ORTHO05D004599 3.0e-16 89.4 160 39.4
Gohir.D11G210200 Gossypium hirsutum HOM05D005432 ORTHO05D004599 3.0e-16 89.4 185 40.5
Gorai.008G084600 Gossypium raimondii HOM05D005432 ORTHO05D004599 1.5e-15 87.0 192 39.1
RcHm_v2.0_Chr2g0108511 Rosa chinensis HOM05D005432 ORTHO05D004599 1.5e-15 87.0 160 39.4
TAR625G0570 Trochodendron aralioides HOM05D005432 ORTHO05D004599 4.3e-15 85.5 160 39.4
Gohir.D12G076200 Gossypium hirsutum HOM05D005432 ORTHO05D004599 5.6e-15 85.1 192 38.0
CiPaw.02G001400 Carya illinoinensis HOM05D005432 ORTHO05D004599 9.5e-15 84.3 186 37.6
Duzib264G0647 Durio zibethinus HOM05D005432 ORTHO05D004599 9.5e-15 84.3 97 55.7
TAR628G1364 Trochodendron aralioides HOM05D005432 ORTHO05D004599 1.2e-14 84.0 176 39.8
Actinidia11967 Actinidia chinensis HOM05D005432 ORTHO05D004599 3.6e-14 82.4 161 36.6
Duzib147G0737 Durio zibethinus HOM05D005432 ORTHO05D004599 4.7e-14 82.0 196 36.7
TWI77G0559 Tripterygium wilfordii HOM05D005432 ORTHO05D004599 4.7e-14 82.0 134 42.5
CiPaw.01G002700 Carya illinoinensis HOM05D005432 ORTHO05D004599 8.1e-14 81.3 170 40.0
FAN28G2020 Fragaria x ananassa HOM05D005432 ORTHO05D004599 8.1e-14 81.3 113 46.0
Gohir.A11G213000 Gossypium hirsutum HOM05D005432 ORTHO05D004599 8.1e-14 81.3 186 38.2
Gorai.007G225500 Gossypium raimondii HOM05D005432 ORTHO05D004599 8.1e-14 81.3 190 37.9
Prupe.6G218200 Prunus persica HOM05D005432 ORTHO05D004599 8.1e-14 81.3 197 34.0
TAR381G0486 Trochodendron aralioides HOM05D005432 ORTHO05D004599 1.1e-13 80.9 198 40.4
Ciclev10026545m.g Citrus clementina HOM05D005432 ORTHO05D004599 1.8e-13 80.1 198 35.9
Dinv23035 Davidia involucrata HOM05D005432 ORTHO05D004599 1.8e-13 80.1 124 43.5
TWI74G0597 Tripterygium wilfordii HOM05D005432 ORTHO05D004599 1.8e-13 80.1 171 36.8
Atru.chr3.1044 Acer truncatum HOM05D005432 ORTHO05D004599 4.0e-13 79.0 183 35.5
Medtr5g015190 Medicago truncatula HOM05D005432 ORTHO05D004599 6.8e-13 78.2 69 58.0
Gohir.A11G048800 Gossypium hirsutum HOM05D005432 ORTHO05D004599 4.4e-12 75.5 188 39.4
COL.COLO4_11602 Corchorus olitorius HOM05D005432 ORTHO05D004599 1.7e-11 73.6 134 38.1
TPR.G9336 Trifolium pratense HOM05D005432 ORTHO05D004599 2.9e-11 72.8 67 56.7
SalBow5G2133 Salvia bowleyana HOM05D005432 ORTHO05D004599 3.7e-11 72.4 186 34.9
PGSC0003DMG400012977 Solanum tuberosum HOM05D005432 ORTHO05D004599 3.7e-11 72.4 217 31.3
DCAR_010807 Daucus carota HOM05D005432 ORTHO05D004599 4.9e-11 72.0 173 32.4
TAR376G0425 Trochodendron aralioides HOM05D005432 ORTHO05D004599 4.9e-11 72.0 201 34.8
Rhsim10G0095000 Rhododendron simsii HOM05D005432 ORTHO05D004599 8.3e-11 71.2 86 50.0
Nitab4.5_0008385g0010 Nicotiana tabacum HOM05D005432 ORTHO05D004599 1.1e-10 70.9 93 44.1
arahy.Tifrunner.gnm1.ann1.6CR1D2 Arachis hypogaea HOM05D005432 ORTHO05D004599 1.4e-10 70.5 132 36.4
ClCG01G017720 Citrullus lanatus HOM05D005432 ORTHO05D004599 2.4e-10 69.7 134 38.8
Gohir.D11G052400 Gossypium hirsutum HOM05D005432 ORTHO05D004599 2.4e-10 69.7 188 38.3
Gorai.007G056800 Gossypium raimondii HOM05D005432 ORTHO05D004599 2.4e-10 69.7 188 38.3
Peaxi162Scf00500g00034 Petunia axillaris HOM05D005432 ORTHO05D004599 3.2e-10 69.3 93 45.2
MD02G1188700 Malus domestica HOM05D005432 ORTHO05D004599 7.1e-10 68.2 95 48.4
Nitab4.5_0008385g0020 Nicotiana tabacum HOM05D005432 ORTHO05D004599 7.1e-10 68.2 82 48.8
Nitab4.5_0000680g0130 Nicotiana tabacum HOM05D005432 ORTHO05D004599 9.2e-10 67.8 90 46.7
Lalb_Chr16g0378951 Lupinus albus HOM05D005432 ORTHO05D004599 1.2e-09 67.4 85 51.8
SGA_v2.0_scaffold15G07481 Striga asiatica HOM05D005432 ORTHO05D004599 1.6e-09 67.0 163 35.0
Sed0012898 Sechium edule HOM05D005432 ORTHO05D004599 2.1e-09 66.6 171 35.7
arahy.Tifrunner.gnm1.ann1.0M6NCC Arachis hypogaea HOM05D005432 ORTHO05D004599 2.7e-09 66.2 56 60.7
MBI16_g39101_MAGBIO Magnolia biondii HOM05D005432 ORTHO05D004599 2.7e-09 66.2 171 33.9
PGSC0003DMG400003320 Solanum tuberosum HOM05D005432 ORTHO05D004599 2.7e-09 66.2 132 37.9
Psat2g172120 Pisum sativum HOM05D005432 ORTHO05D004599 3.5e-09 65.9 154 37.0
Sopen02g014700 Solanum pennellii HOM05D005432 ORTHO05D004599 6.0e-09 65.1 127 38.6
Eucgr.H02317 Eucalyptus grandis HOM05D005432 ORTHO05D004599 7.8e-09 64.7 96 47.9
CANSAT01G2351 Cannabis sativa HOM05D005432 ORTHO05D004599 1.0e-08 64.3 94 48.9
Solyc09g008750.1 Solanum lycopersicum HOM05D005432 ORTHO05D004599 1.0e-08 64.3 87 44.8
Rhsim10G0095100 Rhododendron simsii HOM05D005432 ORTHO05D004599 1.3e-08 63.9 85 43.5
Haze_15264 Corylus avellana HOM05D005432 ORTHO05D004599 2.3e-08 63.2 95 51.6
Eucgr.H02318 Eucalyptus grandis HOM05D005432 ORTHO05D004599 3.0e-08 62.8 91 46.2
Solyc02g064570.2 Solanum lycopersicum HOM05D005432 ORTHO05D004599 3.0e-08 62.8 90 45.6
Cfa004151 Carpinus fangiana HOM05D005432 ORTHO05D004599 5.1e-08 62.0 188 34.0
CDE04G1981 Ceratophyllum demersum HOM05D005432 ORTHO05D004599 5.1e-08 62.0 149 34.2
PGSC0003DMG400002732 Solanum tuberosum HOM05D005432 ORTHO05D004599 6.6e-08 61.6 54 51.9
MELO3C007650.2 Cucumis melo HOM05D005432 ORTHO05D004599 8.6e-08 61.2 57 56.1
Solyc09g008760.1 Solanum lycopersicum HOM05D005432 ORTHO05D004599 8.6e-08 61.2 105 36.2
Carub.0004s0201 Capsella rubella HOM05D009364 ORTHO05D004599 1.9e-07 60.1 127 33.9
Migut.H00333 Erythranthe guttata HOM05D005432 ORTHO05D004599 1.9e-07 60.1 66 54.5
Hma1.2p1_0424F.1_g150570 Hydrangea macrophylla HOM05D005432 ORTHO05D004599 4.3e-07 58.9 88 44.3
ECA232G3846 Erigeron canadensis HOM05D005432 ORTHO05D004599 1.6e-06 57.0 85 38.8
Lsat_1_v5_gn_4_160361 Lactuca sativa HOM05D005432 ORTHO05D004599 1.6e-06 57.0 87 39.1
Cc07_g07280 Coffea canephora HOM05D005432 ORTHO05D004599 2.8e-06 56.2 108 38.9
Hma1.2p1_1085F.1_g255410 Hydrangea macrophylla HOM05D005432 ORTHO05D004599 2.8e-06 56.2 185 34.6
Nn5g30641 Nelumbo nucifera HOM05D005432 ORTHO05D004599 2.8e-06 56.2 56 55.4
PGR102G0812 Punica granatum HOM05D005432 ORTHO05D004599 2.8e-06 56.2 120 35.8
ClCG02G012170 Citrullus lanatus HOM05D005432 ORTHO05D004599 3.6e-06 55.8 79 49.4
Peaxi162Scf00449g00414 Petunia axillaris HOM05D005432 ORTHO05D004599 3.6e-06 55.8 86 46.5
CAN.G775.5 Capsicum annuum HOM05D005432 ORTHO05D004599 6.2e-06 55.1 116 35.3
PGR004G1176 Punica granatum HOM05D005432 ORTHO05D004599 8.1e-06 54.7 187 33.2


User provided reference genes

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