Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G233500 Phaseolus vulgaris HOM05D008250 ORTHO05D010361 2.7e-25 117.9 58 100.0
Lalb_Chr05g0230301 Lupinus albus HOM05D008250 ORTHO05D010361 7.8e-17 89.7 58 75.9
GSVIVG01002948001 Vitis vinifera HOM05D008250 ORTHO05D010361 1.3e-16 89.0 55 80.0
GSVIVG01004436001 Vitis vinifera HOM05D008250 ORTHO05D010361 1.3e-16 89.0 55 80.0
Actinidia16414 Actinidia chinensis HOM05D008250 ORTHO05D010361 2.3e-16 88.2 55 80.0
Hma1.2p1_1760F.1_g301220 Hydrangea macrophylla HOM05D008250 ORTHO05D010361 3.0e-16 87.8 58 77.6
Atru.chr3.1053 Acer truncatum HOM05D008250 ORTHO05D010361 5.0e-16 87.0 54 79.6
COL.COLO4_11607 Corchorus olitorius HOM05D008250 ORTHO05D010361 5.0e-16 87.0 58 77.6
Thecc.01G075500 Theobroma cacao HOM05D008250 ORTHO05D010361 5.0e-16 87.0 58 77.6
HanXRQChr09g0255361 Helianthus annuus HOM05D008250 ORTHO05D010361 8.6e-16 86.3 55 72.7
RcHm_v2.0_Chr2g0108561 Rosa chinensis HOM05D008250 ORTHO05D010361 8.6e-16 86.3 55 78.2
CiPaw.01G002500 Carya illinoinensis HOM05D008250 ORTHO05D010361 1.1e-15 85.9 53 83.0
Gohir.A12G078200 Gossypium hirsutum HOM05D008250 ORTHO05D010361 1.1e-15 85.9 58 77.6
ClCG02G012200 Citrullus lanatus HOM05D008250 ORTHO05D010361 1.5e-15 85.5 55 76.4
Gohir.D12G076400 Gossypium hirsutum HOM05D008250 ORTHO05D010361 1.5e-15 85.5 58 75.9
Gorai.008G085000 Gossypium raimondii HOM05D008250 ORTHO05D010361 1.5e-15 85.5 58 75.9
Lsat_1_v5_gn_4_159680 Lactuca sativa HOM05D008250 ORTHO05D010361 2.5e-15 84.7 58 72.4
Manes.12G117000 Manihot esculenta HOM05D008250 ORTHO05D010361 3.3e-15 84.3 58 74.1
Nn6g34516 Nelumbo nucifera HOM05D008250 ORTHO05D010361 3.3e-15 84.3 54 79.6
Glyma.05G107700 Glycine max HOM05D008250 ORTHO05D010361 5.6e-15 83.6 57 73.7
Potri.007G006700 Populus trichocarpa HOM05D008250 ORTHO05D010361 7.3e-15 83.2 58 75.9
MD02G1189100 Malus domestica HOM05D008250 ORTHO05D010361 9.5e-15 82.8 51 74.5
Glyma.17G159100 Glycine max HOM05D008250 ORTHO05D010361 1.2e-14 82.4 58 75.9
Migut.H00327 Erythranthe guttata HOM05D008250 ORTHO05D010361 2.1e-14 81.6 60 68.3
Ciclev10026916m.g Citrus clementina HOM05D008250 ORTHO05D010361 4.7e-14 80.5 54 74.1
TWI74G1530 Tripterygium wilfordii HOM05D008250 ORTHO05D010361 4.7e-14 80.5 49 75.5
Medtr4g097410 Medicago truncatula HOM05D008250 ORTHO05D010361 8.1e-14 79.7 61 68.9
Sed0009961 Sechium edule HOM05D008250 ORTHO05D010361 1.1e-13 79.3 55 72.7
Aqoxy6G02462 Aquilegia oxysepala HOM05D008250 ORTHO05D010361 3.1e-13 77.8 51 76.5
Prupe.6G217600 Prunus persica HOM05D008250 ORTHO05D010361 3.1e-13 77.8 54 70.4
Solyc02g092130.2 Solanum lycopersicum HOM05D008250 ORTHO05D010361 3.1e-13 77.8 50 80.0
CARHR279880 Cardamine hirsuta HOM05D008250 ORTHO05D010361 4.0e-13 77.4 53 69.8
TPR.G3717 Trifolium pratense HOM05D008250 ORTHO05D010361 5.2e-13 77.0 63 65.1
Thhalv10005252m.g Eutrema salsugineum HOM05D008250 ORTHO05D010361 6.8e-13 76.6 54 66.7
PGSC0003DMG400021408 Solanum tuberosum HOM05D008250 ORTHO05D010361 8.9e-13 76.3 50 78.0
AT5G65880 Arabidopsis thaliana HOM05D008250 ORTHO05D010361 1.2e-12 75.9 63 61.9
CDE02G1785 Ceratophyllum demersum HOM05D008250 ORTHO05D010361 1.5e-12 75.5 54 70.4
Psat4g080920 Pisum sativum HOM05D008250 ORTHO05D010361 1.5e-12 75.5 36 94.4
BcaB02g09904 Brassica carinata HOM05D008250 ORTHO05D010361 2.0e-12 75.1 54 64.8
Lj4g0012638 Lotus japonicus HOM05D008250 ORTHO05D010361 2.0e-12 75.1 37 89.2
Sc03g0002500 Simmondsia chinensis HOM05D008250 ORTHO05D010361 2.0e-12 75.1 58 63.8
BcaC01g02825 Brassica carinata HOM05D008250 ORTHO05D010361 2.6e-12 74.7 54 64.8
BraA06t26203Z Brassica rapa HOM05D008250 ORTHO05D010361 2.6e-12 74.7 54 64.8
Carub.0008s2677 Capsella rubella HOM05D008250 ORTHO05D010361 2.6e-12 74.7 59 62.7
AL8G43594 Arabidopsis lyrata HOM05D008250 ORTHO05D010361 5.8e-12 73.6 55 61.8
C03p59760 Brassica napus HOM05D008250 ORTHO05D010361 1.7e-11 72.0 54 63.0
C03p59770 Brassica napus HOM05D008250 ORTHO05D010361 1.7e-11 72.0 54 63.0
BolC3t18239H Brassica oleracea HOM05D008250 ORTHO05D010361 1.7e-11 72.0 54 63.0
BolC3t18240H Brassica oleracea HOM05D008250 ORTHO05D010361 1.7e-11 72.0 54 63.0
Potri.014G006850 Populus trichocarpa HOM05D008250 ORTHO05D010361 3.7e-11 70.9 45 75.6
SEGI_25339 Sequoiadendron giganteum HOM05D008250 ORTHO05D010361 6.4e-11 70.1 52 65.4
arahy.Tifrunner.gnm1.ann1.IKZ63P Arachis hypogaea HOM05D008250 ORTHO05D010361 1.9e-10 68.6 34 91.2
arahy.Tifrunner.gnm1.ann1.L5XXFX Arachis hypogaea HOM05D008250 ORTHO05D010361 1.9e-10 68.6 34 91.2
CsaV3_2G016360 Cucumis sativus L. HOM05D008250 ORTHO05D010361 9.2e-10 66.2 38 81.6
Rhsim08G0091900 Rhododendron simsii HOM05D008250 ORTHO05D010361 2.1e-09 65.1 104 42.3
Haze_15258 Corylus avellana HOM05D008250 ORTHO05D010361 2.3e-08 61.6 37 81.1
SGA_v2.0_scaffold15G07489 Striga asiatica HOM05D008250 ORTHO05D010361 2.3e-08 61.6 38 81.6
Os03g0675700 Oryza sativa ssp. japonica HOM05D008250 ORTHO05D010361 2.5e-07 58.2 51 51.0
CSS0002791 Camellia sinensis var. sinensis HOM05D008250 ORTHO05D010361 4.3e-07 57.4 40 75.0
CSS0014718 Camellia sinensis var. sinensis HOM05D008250 ORTHO05D010361 4.3e-07 57.4 40 75.0
Aa31LG1G16230 Aethionema arabicum HOM05D008250 ORTHO05D010361 4.7e-06 53.9 29 82.8


User provided reference genes

Program Settings