Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G230000 Phaseolus vulgaris HOM05D007134 ORTHO05D009004 7.4e-197 690.3 330 100.0
Glyma.05G112400 Glycine max HOM05D007134 ORTHO05D009004 3.7e-164 581.6 315 88.6
Glyma.17G154600 Glycine max HOM05D007134 ORTHO05D009004 3.5e-162 575.1 319 86.8
Ca_22068_v3 Cicer arietinum L. HOM05D007134 ORTHO05D009004 2.9e-153 545.4 319 80.6
Lj4g0007831 Lotus japonicus HOM05D007134 ORTHO05D009004 3.6e-151 538.5 315 80.3
TPR.G28658 Trifolium pratense HOM05D007134 ORTHO05D009004 6.1e-151 537.7 319 80.6
Lalb_Chr05g0220571 Lupinus albus HOM05D007134 ORTHO05D009004 7.0e-147 524.2 319 78.7
Psat4g079040 Pisum sativum HOM05D007134 ORTHO05D009004 4.6e-146 521.5 319 78.4
arahy.Tifrunner.gnm1.ann1.40JZG2 Arachis hypogaea HOM05D007134 ORTHO05D009004 4.3e-144 515.0 319 77.7
arahy.Tifrunner.gnm1.ann1.2XNM6Q Arachis hypogaea HOM05D007134 ORTHO05D009004 3.6e-143 511.9 319 76.8
CiPaw.11G091800 Carya illinoinensis HOM05D007134 ORTHO05D009004 1.0e-129 467.2 318 70.4
Cfa012416 Carpinus fangiana HOM05D007134 ORTHO05D009004 3.4e-125 452.2 318 67.9
Manes.15G172000 Manihot esculenta HOM05D007134 ORTHO05D009004 2.9e-124 449.1 294 70.7
Atru.chr6.1744 Acer truncatum HOM05D007134 ORTHO05D009004 8.4e-124 447.6 319 67.1
Haze_08260 Corylus avellana HOM05D007134 ORTHO05D009004 2.4e-123 446.0 346 63.6
GSVIVG01013189001 Vitis vinifera HOM05D007134 ORTHO05D009004 3.2e-123 445.7 289 72.7
Thecc.03G230400 Theobroma cacao HOM05D007134 ORTHO05D009004 7.1e-123 444.5 295 70.2
Potri.001G144000 Populus trichocarpa HOM05D007134 ORTHO05D009004 2.1e-122 443.0 296 71.3
TAR629G3531 Trochodendron aralioides HOM05D007134 ORTHO05D009004 6.0e-122 441.4 302 65.6
CSS0021568 Camellia sinensis var. sinensis HOM05D007134 ORTHO05D009004 1.7e-121 439.9 297 68.4
Dinv28939 Davidia involucrata HOM05D007134 ORTHO05D009004 3.9e-121 438.7 295 68.8
Gohir.D12G211900 Gossypium hirsutum HOM05D007134 ORTHO05D009004 3.3e-120 435.6 295 68.5
Gorai.008G227500 Gossypium raimondii HOM05D007134 ORTHO05D009004 3.3e-120 435.6 295 68.5
Actinidia03384 Actinidia chinensis HOM05D007134 ORTHO05D009004 7.3e-120 434.5 297 67.3
CANSAT21G0276 Cannabis sativa HOM05D007134 ORTHO05D009004 1.3e-119 433.7 301 66.4
TWI81G0484 Tripterygium wilfordii HOM05D007134 ORTHO05D009004 1.6e-119 433.3 295 66.8
COL.COLO4_17065 Corchorus olitorius HOM05D007134 ORTHO05D009004 2.8e-119 432.6 294 67.7
Hma1.2p1_2785F.1_g328490 Hydrangea macrophylla HOM05D007134 ORTHO05D009004 4.8e-119 431.8 323 63.2
Hma1.2p1_0991F.1_g244990 Hydrangea macrophylla HOM05D007134 ORTHO05D009004 1.1e-118 430.6 297 67.0
Sabra01G0112400 Salix brachista HOM05D007134 ORTHO05D009004 1.4e-118 430.3 327 65.4
Ciclev10032247m.g Citrus clementina HOM05D007134 ORTHO05D009004 6.9e-118 427.9 292 67.5
Duzib205G1618 Durio zibethinus HOM05D007134 ORTHO05D009004 4.4e-117 425.2 295 67.5
Solyc08g077090.3 Solanum lycopersicum HOM05D007134 ORTHO05D009004 5.8e-117 424.9 293 66.2
RcHm_v2.0_Chr7g0209231 Rosa chinensis HOM05D007134 ORTHO05D009004 1.3e-116 423.7 294 67.0
MELO3C013860.2 Cucumis melo HOM05D007134 ORTHO05D009004 1.7e-116 423.3 295 64.7
Prupe.5G039700 Prunus persica HOM05D007134 ORTHO05D009004 1.7e-116 423.3 313 63.3
Peaxi162Scf00006g04220 Petunia axillaris HOM05D007134 ORTHO05D009004 2.9e-116 422.5 297 65.7
FvH4_5g21740 Fragaria vesca HOM05D007134 ORTHO05D009004 6.4e-116 421.4 294 66.7
FAN08G2031 Fragaria x ananassa HOM05D007134 ORTHO05D009004 8.4e-116 421.0 294 66.7
Sopen08g025670 Solanum pennellii HOM05D007134 ORTHO05D009004 8.4e-116 421.0 295 66.1
PSO782G3567 Papaver somniferum HOM05D007134 ORTHO05D009004 2.4e-115 419.5 302 63.9
CsaV3_3G001860 Cucumis sativus L. HOM05D007134 ORTHO05D009004 3.2e-115 419.1 287 66.6
FAN13G3184 Fragaria x ananassa HOM05D007134 ORTHO05D009004 9.3e-115 417.5 312 63.5
Lj8A293T18 Lonicera japonica HOM05D007134 ORTHO05D009004 1.2e-114 417.2 294 65.3
CAN.G1659.3 Capsicum annuum HOM05D007134 ORTHO05D009004 2.1e-114 416.4 295 65.1
ClCG10G001760 Citrullus lanatus HOM05D007134 ORTHO05D009004 4.6e-114 415.2 295 64.4
EL10Ac5g12144 Beta vulgaris HOM05D007134 ORTHO05D009004 1.0e-113 414.1 292 64.4
PGR042G2424 Punica granatum HOM05D007134 ORTHO05D009004 1.0e-113 414.1 299 64.5
Aqoxy3G02427 Aquilegia oxysepala HOM05D007134 ORTHO05D009004 3.0e-113 412.5 288 66.0
Nitab4.5_0002931g0030 Nicotiana tabacum HOM05D007134 ORTHO05D009004 3.0e-113 412.5 295 64.7
Sed0020644 Sechium edule HOM05D007134 ORTHO05D009004 5.1e-113 411.8 294 64.6
PGSC0003DMG400017530 Solanum tuberosum HOM05D007134 ORTHO05D009004 6.6e-113 411.4 323 61.0
AUR62007266 Chenopodium quinoa HOM05D007134 ORTHO05D009004 1.1e-112 410.6 292 64.7
MD06G1032400 Malus domestica HOM05D007134 ORTHO05D009004 1.9e-112 409.8 313 61.7
Sc01g0007540 Simmondsia chinensis HOM05D007134 ORTHO05D009004 1.9e-112 409.8 320 58.4
Nitab4.5_0001276g0070 Nicotiana tabacum HOM05D007134 ORTHO05D009004 7.3e-112 407.9 287 66.6
FAN18G1678 Fragaria x ananassa HOM05D007134 ORTHO05D009004 1.6e-111 406.8 319 61.1
Cc08_g02480 Coffea canephora HOM05D007134 ORTHO05D009004 3.6e-111 405.6 288 66.3
Eucgr.E00292 Eucalyptus grandis HOM05D007134 ORTHO05D009004 1.4e-110 403.7 309 61.5
Ah.12g054890 Amaranthus hybridus HOM05D007134 ORTHO05D009004 1.8e-110 403.3 294 63.3
THA.LOC104814437 Tarenaya hassleriana HOM05D007134 ORTHO05D009004 2.0e-109 399.8 304 62.2
MSTRG.6669 Avicennia marina HOM05D007134 ORTHO05D009004 8.4e-108 394.4 294 61.9
CDE12G0960 Ceratophyllum demersum HOM05D007134 ORTHO05D009004 3.2e-107 392.5 295 63.1
Gohir.A12G209200 Gossypium hirsutum HOM05D007134 ORTHO05D009004 1.0e-105 387.5 259 70.7
AT2G35320 Arabidopsis thaliana HOM05D007134 ORTHO05D009004 3.0e-105 386.0 294 61.2
AL4G31350 Arabidopsis lyrata HOM05D007134 ORTHO05D009004 3.9e-105 385.6 294 62.2
Rhsim11G0013400 Rhododendron simsii HOM05D007134 ORTHO05D009004 5.1e-105 385.2 412 49.3
Oeu036071.3 Olea europaea HOM05D007134 ORTHO05D009004 6.7e-105 384.8 322 59.0
Carub.0004s1701 Capsella rubella HOM05D007134 ORTHO05D009004 8.7e-105 384.4 294 60.5
Sp4g17520 Schrenkiella parvula HOM05D007134 ORTHO05D009004 8.7e-105 384.4 294 61.2
CDE04G0512 Ceratophyllum demersum HOM05D007134 ORTHO05D009004 1.9e-104 383.3 298 62.1
AL457U10010 Arabidopsis lyrata HOM05D007134 ORTHO05D009004 3.3e-104 382.5 294 61.9
Lsat_1_v5_gn_6_64760 Lactuca sativa HOM05D007134 ORTHO05D009004 7.4e-104 381.3 290 61.7
ECA233G0754 Erigeron canadensis HOM05D007134 ORTHO05D009004 2.1e-103 379.8 292 61.3
Thhalv10016981m.g Eutrema salsugineum HOM05D007134 ORTHO05D009004 2.1e-103 379.8 291 60.8
SGA_v2.0_scaffold34G13941 Striga asiatica HOM05D007134 ORTHO05D009004 2.8e-103 379.4 330 55.8
DCAR_032214 Daucus carota HOM05D007134 ORTHO05D009004 1.1e-102 377.5 295 57.3
Aa31LG9G15330 Aethionema arabicum HOM05D007134 ORTHO05D009004 1.8e-102 376.7 292 61.0
A03p19520 Brassica napus HOM05D007134 ORTHO05D009004 4.0e-102 375.6 294 59.5
BraA03t11205Z Brassica rapa HOM05D007134 ORTHO05D009004 4.0e-102 375.6 294 59.5
Hund11255 Selenicereus undatus HOM05D007134 ORTHO05D009004 5.3e-102 375.2 340 54.4
HanXRQChr06g0178411 Helianthus annuus HOM05D007134 ORTHO05D009004 2.0e-101 373.2 295 60.0
CARHR129460 Cardamine hirsuta HOM05D007134 ORTHO05D009004 2.6e-101 372.9 294 58.5
Medtr4g098510 Medicago truncatula HOM05D007134 ORTHO05D009004 2.6e-101 372.9 243 75.7
C03p22750 Brassica napus HOM05D007134 ORTHO05D009004 3.4e-101 372.5 296 59.1
ATR0049G037 Amborella trichopoda HOM05D007134 ORTHO05D009004 4.5e-101 372.1 307 57.7
BolC3t14673H Brassica oleracea HOM05D007134 ORTHO05D009004 2.2e-100 369.8 307 58.0
VMungo0251G0669 Vigna mungo HOM05D007134 ORTHO05D009004 2.9e-100 369.4 179 96.6
SalBow7G1996 Salvia bowleyana HOM05D007134 ORTHO05D009004 8.4e-100 367.9 299 58.2
Migut.M00165 Erythranthe guttata HOM05D007134 ORTHO05D009004 1.1e-99 367.5 285 60.4
Os06g0110100 Oryza sativa ssp. japonica HOM05D007134 ORTHO05D009004 1.4e-99 367.1 291 58.4
SalBow7G3039 Salvia bowleyana HOM05D007134 ORTHO05D009004 1.4e-99 367.1 295 59.0
Zm00001eb417090 Zea mays HOM05D007134 ORTHO05D009004 1.9e-99 366.7 285 59.6
vmacro00339 Vaccinium macrocarpon HOM05D007134 ORTHO05D009004 1.2e-98 364.0 451 45.0
Nn6g33621 Nelumbo nucifera HOM05D007134 ORTHO05D009004 1.3e-95 354.0 295 56.9
unitig_749.g14086 Utricularia gibba HOM05D007134 ORTHO05D009004 1.2e-93 347.4 295 57.6
AUR62018733 Chenopodium quinoa HOM05D007134 ORTHO05D009004 1.8e-89 333.6 292 54.5
PSO063G6706 Papaver somniferum HOM05D007134 ORTHO05D009004 8.7e-89 331.3 300 52.3
FAN04G0135 Fragaria x ananassa HOM05D007134 ORTHO05D009004 9.7e-88 327.8 294 53.7
BcaC01g05731 Brassica carinata HOM05D007134 ORTHO05D009004 1.0e-84 317.8 305 52.1
Pp3c2_15970 Physcomitrium patens HOM05D007134 ORTHO05D009004 3.1e-78 296.2 292 49.0
AagrBONN_evm.TU.Sc2ySwM_117.2263 Anthoceros agrestis HOM05D007134 ORTHO05D009004 3.8e-76 289.3 320 44.4
Pp3c1_31250 Physcomitrium patens HOM05D007134 ORTHO05D009004 2.6e-69 266.5 306 44.1
VMungo0251G0585 Vigna mungo HOM05D007134 ORTHO05D009004 4.1e-62 242.7 138 86.2
Pp3c2_10940 Physcomitrium patens HOM05D007134 ORTHO05D009004 1.5e-59 234.2 298 42.3
QL12p006104 Quercus lobata HOM05D007134 ORTHO05D009004 7.0e-54 215.3 148 68.2
Pp3c17_17110 Physcomitrium patens HOM05D007134 ORTHO05D009004 8.5e-52 208.4 257 40.9
SEGI_12545 Sequoiadendron giganteum HOM05D007134 ORTHO05D009004 4.3e-35 152.9 146 50.7
Cpa.g.sc71.65 Carica papaya HOM05D007134 ORTHO05D009004 5.2e-33 146.0 85 68.2
Nn6g33134 Nelumbo nucifera HOM05D007134 ORTHO05D009004 3.4e-08 63.5 68 52.9
Cre09.g398150 Chlamydomonas reinhardtii HOM05D007134 ORTHO05D009004 1.9e-06 57.8 343 21.3


User provided reference genes

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