Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G227000 Phaseolus vulgaris HOM05D006116 ORTHO05D007795 5.8e-234 813.9 430 100.0
VMungo0251G0386 Vigna mungo HOM05D006116 ORTHO05D007795 2.3e-198 695.7 450 81.1
Lj4g0012718 Lotus japonicus HOM05D006116 ORTHO05D007795 2.2e-177 625.9 441 72.1
Ca_22031_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 2.9e-177 625.5 442 77.8
Glyma.17G150200 Glycine max HOM05D006116 ORTHO05D007795 5.0e-177 624.8 437 72.8
Medtr4g099100 Medicago truncatula HOM05D006116 ORTHO05D007795 3.0e-174 615.5 466 67.2
Lalb_Chr05g0220761 Lupinus albus HOM05D006116 ORTHO05D007795 5.7e-173 611.3 442 70.4
arahy.Tifrunner.gnm1.ann1.F87Z6X Arachis hypogaea HOM05D006116 ORTHO05D007795 1.7e-172 609.8 449 70.2
arahy.Tifrunner.gnm1.ann1.L13TYF Arachis hypogaea HOM05D006116 ORTHO05D007795 1.1e-171 607.1 449 69.9
TPR.G11192 Trifolium pratense HOM05D006116 ORTHO05D007795 1.5e-168 596.7 444 71.6
Actinidia03408 Actinidia chinensis HOM05D006116 ORTHO05D007795 1.7e-161 573.2 438 65.3
Ciclev10020221m.g Citrus clementina HOM05D006116 ORTHO05D007795 3.6e-159 565.5 442 63.6
vmacro00376 Vaccinium macrocarpon HOM05D006116 ORTHO05D007795 1.4e-158 563.5 444 63.3
COL.COLO4_06703 Corchorus olitorius HOM05D006116 ORTHO05D007795 6.8e-158 561.2 443 63.0
CSS0043999 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 2.0e-157 559.7 441 62.8
Prupe.5G050800 Prunus persica HOM05D006116 ORTHO05D007795 3.7e-156 555.4 445 62.5
Gorai.008G230000 Gossypium raimondii HOM05D006116 ORTHO05D007795 4.8e-156 555.1 439 69.5
Rhsim11G0056500 Rhododendron simsii HOM05D006116 ORTHO05D007795 6.3e-156 554.7 443 62.1
Gohir.A12G211900 Gossypium hirsutum HOM05D006116 ORTHO05D007795 7.0e-155 551.2 439 69.0
PGR042G3339 Punica granatum HOM05D006116 ORTHO05D007795 1.6e-154 550.1 451 60.5
ClCG10G002040 Citrullus lanatus HOM05D006116 ORTHO05D007795 5.9e-154 548.1 435 63.4
FAN08G3374 Fragaria x ananassa HOM05D006116 ORTHO05D007795 1.0e-153 547.4 443 60.7
MD04G1057000 Malus domestica HOM05D006116 ORTHO05D007795 1.3e-153 547.0 440 62.0
FAN04G0705 Fragaria x ananassa HOM05D006116 ORTHO05D007795 2.9e-153 545.8 443 60.7
Lalb_Chr09g0329681 Lupinus albus HOM05D006116 ORTHO05D007795 2.9e-153 545.8 327 79.8
FAN18G3779 Fragaria x ananassa HOM05D006116 ORTHO05D007795 5.0e-153 545.0 439 60.1
THA.LOC104813328 Tarenaya hassleriana HOM05D006116 ORTHO05D007795 3.3e-152 542.3 442 61.5
FvH4_5g20810 Fragaria vesca HOM05D006116 ORTHO05D007795 5.5e-152 541.6 443 59.6
Nitab4.5_0006135g0020 Nicotiana tabacum HOM05D006116 ORTHO05D007795 2.1e-151 539.7 438 60.3
Oeu020145.1 Olea europaea HOM05D006116 ORTHO05D007795 6.1e-151 538.1 436 62.6
CANSAT21G1244 Cannabis sativa HOM05D006116 ORTHO05D007795 8.0e-151 537.7 460 58.9
CSS0034154 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 2.3e-150 536.2 436 61.0
Hma1.2p1_0414F.1_g147510 Hydrangea macrophylla HOM05D006116 ORTHO05D007795 2.3e-150 536.2 441 61.9
CsaV3_3G002130 Cucumis sativus L. HOM05D006116 ORTHO05D007795 4.0e-150 535.4 437 62.7
MELO3C013885.2 Cucumis melo HOM05D006116 ORTHO05D007795 2.6e-149 532.7 437 62.5
BolC7t45369H Brassica oleracea HOM05D006116 ORTHO05D007795 3.4e-149 532.3 440 62.0
Nitab4.5_0001255g0040 Nicotiana tabacum HOM05D006116 ORTHO05D007795 3.4e-149 532.3 447 59.1
HanXRQChr03g0087311 Helianthus annuus HOM05D006116 ORTHO05D007795 1.3e-148 530.4 439 63.1
C07p48610 Brassica napus HOM05D006116 ORTHO05D007795 1.7e-148 530.0 440 61.8
PGSC0003DMG400001856 Solanum tuberosum HOM05D006116 ORTHO05D007795 1.4e-147 526.9 443 57.8
CAN.G1445.8 Capsicum annuum HOM05D006116 ORTHO05D007795 2.4e-147 526.2 439 59.2
ECA240G2524 Erigeron canadensis HOM05D006116 ORTHO05D007795 4.5e-146 521.9 437 61.3
Duzib205G0680 Durio zibethinus HOM05D006116 ORTHO05D007795 7.8e-146 521.2 439 60.6
Eucgr.E00329 Eucalyptus grandis HOM05D006116 ORTHO05D007795 2.3e-145 519.6 450 57.8
Sopen08g026090 Solanum pennellii HOM05D006116 ORTHO05D007795 5.0e-145 518.5 439 56.7
Solyc08g077510.4 Solanum lycopersicum HOM05D006116 ORTHO05D007795 6.6e-145 518.1 439 56.7
Cc08_g01540 Coffea canephora HOM05D006116 ORTHO05D007795 1.1e-144 517.3 452 58.2
Migut.E00901 Erythranthe guttata HOM05D006116 ORTHO05D007795 3.3e-144 515.8 307 77.5
TWI60G0034 Tripterygium wilfordii HOM05D006116 ORTHO05D007795 4.3e-144 515.4 437 63.4
GSVIVG01013271001 Vitis vinifera HOM05D006116 ORTHO05D007795 7.3e-144 514.6 445 59.1
QL12p007972 Quercus lobata HOM05D006116 ORTHO05D007795 9.5e-144 514.2 456 58.8
Thecc.03G237000 Theobroma cacao HOM05D006116 ORTHO05D007795 1.6e-143 513.5 445 58.2
Potri.003G085600 Populus trichocarpa HOM05D006116 ORTHO05D007795 6.1e-143 511.5 431 60.1
CiPaw.11G085600 Carya illinoinensis HOM05D006116 ORTHO05D007795 5.2e-142 508.4 442 60.2
Peaxi162Scf00084g00117 Petunia axillaris HOM05D006116 ORTHO05D007795 5.2e-142 508.4 434 58.1
Hund14464 Selenicereus undatus HOM05D006116 ORTHO05D007795 8.9e-142 507.7 449 58.8
DCAR_008310 Daucus carota HOM05D006116 ORTHO05D007795 2.6e-141 506.1 460 57.0
Gohir.D12G214400 Gossypium hirsutum HOM05D006116 ORTHO05D007795 5.8e-141 505.0 301 79.1
RcHm_v2.0_Chr7g0207741 Rosa chinensis HOM05D006116 ORTHO05D007795 5.8e-141 505.0 444 57.7
Sed0023369 Sechium edule HOM05D006116 ORTHO05D007795 6.4e-140 501.5 294 78.9
Ah.12g053810 Amaranthus hybridus HOM05D006116 ORTHO05D007795 1.4e-139 500.4 448 57.1
Lj8A287G22 Lonicera japonica HOM05D006116 ORTHO05D007795 1.4e-139 500.4 327 70.9
CARHR223700 Cardamine hirsuta HOM05D006116 ORTHO05D007795 2.4e-139 499.6 440 58.4
A03p50320 Brassica napus HOM05D006116 ORTHO05D007795 5.4e-139 498.4 438 58.7
Thhalv10025290m.g Eutrema salsugineum HOM05D006116 ORTHO05D007795 9.2e-139 497.7 433 65.6
Lsat_1_v5_gn_6_88480 Lactuca sativa HOM05D006116 ORTHO05D007795 1.6e-138 496.9 449 61.2
BraA03t14121Z Brassica rapa HOM05D006116 ORTHO05D007795 2.0e-138 496.5 438 59.1
Nn1g00701 Nelumbo nucifera HOM05D006116 ORTHO05D007795 2.0e-138 496.5 442 58.4
Aa31LG2G13210 Aethionema arabicum HOM05D006116 ORTHO05D007795 1.7e-137 493.4 428 59.1
MSTRG.1960 Avicennia marina HOM05D006116 ORTHO05D007795 2.5e-136 489.6 437 58.1
SGA_v2.0_scaffold20G09247 Striga asiatica HOM05D006116 ORTHO05D007795 5.6e-136 488.4 304 72.4
Aqoxy7G00869 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 2.8e-135 486.1 439 59.5
ClCG00G004790 Citrullus lanatus HOM05D006116 ORTHO05D007795 2.8e-135 486.1 435 58.6
unitig_21.g20374 Utricularia gibba HOM05D006116 ORTHO05D007795 3.1e-134 482.6 329 69.9
AL7G37600 Arabidopsis lyrata HOM05D006116 ORTHO05D007795 5.2e-134 481.9 446 55.8
PSO732G0356 Papaver somniferum HOM05D006116 ORTHO05D007795 5.2e-134 481.9 439 55.4
Sp7g17070 Schrenkiella parvula HOM05D006116 ORTHO05D007795 7.5e-133 478.0 436 58.9
Carub.0007s2428 Capsella rubella HOM05D006116 ORTHO05D007795 9.8e-133 477.6 299 74.6
Sc07g0009020 Simmondsia chinensis HOM05D006116 ORTHO05D007795 2.4e-131 473.0 448 54.0
EL10Ac5g12218 Beta vulgaris HOM05D006116 ORTHO05D007795 5.4e-131 471.9 519 50.9
Manes.17G019700 Manihot esculenta HOM05D006116 ORTHO05D007795 3.5e-130 469.2 441 55.6
AUR62018802 Chenopodium quinoa HOM05D006116 ORTHO05D007795 3.0e-129 466.1 415 56.9
ATR0829G115 Amborella trichopoda HOM05D006116 ORTHO05D007795 2.5e-128 463.0 454 54.6
PSO675G1792 Papaver somniferum HOM05D006116 ORTHO05D007795 5.6e-128 461.8 444 54.5
AUR62007200 Chenopodium quinoa HOM05D006116 ORTHO05D007795 6.2e-127 458.4 302 69.9
Os04g0542900 Oryza sativa ssp. japonica HOM05D006116 ORTHO05D007795 1.1e-126 457.6 477 50.5
Psat4g077320 Pisum sativum HOM05D006116 ORTHO05D007795 2.3e-126 456.4 363 69.7
Zm00001eb075030 Zea mays HOM05D006116 ORTHO05D007795 4.9e-124 448.7 325 63.1
HPP92_020688 Vanilla planifolia HOM05D006116 ORTHO05D007795 7.6e-117 424.9 278 71.6
SEGI_40490 Sequoiadendron giganteum HOM05D006116 ORTHO05D007795 4.2e-115 419.1 295 67.1
Pp3c14_16100 Physcomitrium patens HOM05D006116 ORTHO05D007795 1.3e-111 407.5 330 59.1
Pp3c14_16101 Physcomitrium patens HOM05D006116 ORTHO05D007795 1.3e-111 407.5 330 59.1
Mapoly0141s0023 Marchantia polymorpha HOM05D006116 ORTHO05D007795 3.4e-109 399.4 373 54.7
AagrBONN_evm.TU.Sc2ySwM_368.518 Anthoceros agrestis HOM05D006116 ORTHO05D007795 1.4e-107 394.0 445 46.5
CiPaw.12G058000 Carya illinoinensis HOM05D006116 ORTHO05D007795 2.4e-107 393.3 238 77.7
Pp3c2_10960 Physcomitrium patens HOM05D006116 ORTHO05D007795 1.7e-105 387.1 316 58.5
TAR375G0725 Trochodendron aralioides HOM05D006116 ORTHO05D007795 3.9e-105 386.0 388 53.4
SMO356G0030 Selaginella moellendorffii HOM05D006116 ORTHO05D007795 5.1e-105 385.6 305 60.0
Migut.E00812 Erythranthe guttata HOM05D006116 ORTHO05D007795 3.1e-102 376.3 220 80.0
TAR375G0708 Trochodendron aralioides HOM05D006116 ORTHO05D007795 3.5e-98 362.8 371 52.8
FAN13G0371 Fragaria x ananassa HOM05D006116 ORTHO05D007795 7.4e-96 355.1 340 52.6
Zm00001eb313880 Zea mays HOM05D006116 ORTHO05D007795 2.8e-95 353.2 268 60.4
Haze_08334 Corylus avellana HOM05D006116 ORTHO05D007795 6.2e-95 352.1 362 52.8
BcaC06g33529 Brassica carinata HOM05D006116 ORTHO05D007795 2.0e-93 347.1 351 53.0
Zm00001eb091650 Zea mays HOM05D006116 ORTHO05D007795 2.1e-90 337.0 304 52.6
Zm00001eb319310 Zea mays HOM05D006116 ORTHO05D007795 3.3e-80 303.1 203 68.5
CBR_g27781 Chara braunii HOM05D006116 ORTHO05D007795 4.3e-72 276.2 267 47.6
Dinv28896 Davidia involucrata HOM05D006116 ORTHO05D007795 3.6e-66 256.5 200 63.0
Cre14.g631900 Chlamydomonas reinhardtii HOM05D006116 ORTHO05D007795 3.0e-65 253.4 276 43.1
Zm00001eb129530 Zea mays HOM05D006116 ORTHO05D007795 1.3e-63 248.1 205 54.6
Zm00001eb391960 Zea mays HOM05D006116 ORTHO05D007795 1.3e-63 248.1 205 54.6
Atru.chr9.1147 Acer truncatum HOM05D006116 ORTHO05D007795 1.3e-55 221.5 120 85.8
Ca_20974_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 4.0e-49 199.9 155 65.8
Zm00001eb268110 Zea mays HOM05D006116 ORTHO05D007795 8.0e-42 175.6 190 44.7
PSO732G0385 Papaver somniferum HOM05D006116 ORTHO05D007795 1.4e-41 174.9 251 39.4
Lsat_1_v5_gn_7_9401 Lactuca sativa HOM05D006116 ORTHO05D000290 2.1e-34 151.0 123 56.9
Zm00001eb276710 Zea mays HOM05D006116 ORTHO05D007795 6.1e-34 149.4 131 51.1
EL10Ac5g12217 Beta vulgaris HOM05D006116 ORTHO05D007795 2.0e-29 134.4 78 74.4
TAR375G0859 Trochodendron aralioides HOM05D006116 ORTHO05D007795 6.2e-26 122.9 70 84.3
DCAR_005654 Daucus carota HOM05D006116 ORTHO05D007795 5.4e-22 109.8 68 70.6
CAN.G507.3 Capsicum annuum HOM05D006116 ORTHO05D007795 4.3e-19 100.1 73 60.3
CDE11G0087 Ceratophyllum demersum HOM05D006116 ORTHO05D007795 8.3e-15 85.9 53 71.7
Aqoxy6G01690 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 1.1e-11 75.5 118 30.5
TAR375G0706 Trochodendron aralioides HOM05D006116 ORTHO05D009946 8.1e-10 69.3 62 46.8
Aqoxy7G03532 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 4.4e-08 63.5 59 45.8
BolC8t48435H Brassica oleracea HOM05D006116 ORTHO05D007795 2.2e-07 61.2 41 65.9


User provided reference genes

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