Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G226000 Phaseolus vulgaris HOM05D006103 ORTHO05D007468 1.4e-155 553.1 318 100.0
VMungo0251G0880 Vigna mungo HOM05D006103 ORTHO05D007468 2.2e-137 492.7 318 89.0
Glyma.05G067000 Glycine max HOM05D006103 ORTHO05D007468 5.6e-133 478.0 318 88.1
arahy.Tifrunner.gnm1.ann1.GKQN4T Arachis hypogaea HOM05D006103 ORTHO05D007468 1.5e-122 443.4 319 81.2
Lalb_Chr16g0386381 Lupinus albus HOM05D006103 ORTHO05D007468 3.0e-118 429.1 318 76.7
Lj4g0004061 Lotus japonicus HOM05D006103 ORTHO05D007468 1.9e-112 409.8 329 73.6
Ca_22022_v3 Cicer arietinum L. HOM05D006103 ORTHO05D007468 3.3e-109 399.1 318 67.9
Medtr4g099190 Medicago truncatula HOM05D006103 ORTHO05D007468 2.4e-104 382.9 334 65.0
CiPaw.11G084400 Carya illinoinensis HOM05D006103 ORTHO05D007468 1.0e-102 377.5 325 69.8
TAR375G0262 Trochodendron aralioides HOM05D006103 ORTHO05D007468 1.9e-101 373.2 318 68.2
Gohir.D08G182200 Gossypium hirsutum HOM05D006103 ORTHO05D007468 2.5e-101 372.9 319 67.7
Thecc.03G237900 Theobroma cacao HOM05D006103 ORTHO05D007468 2.5e-101 372.9 319 72.1
Gorai.004G191100 Gossypium raimondii HOM05D006103 ORTHO05D007468 9.6e-101 370.9 319 67.4
Prupe.5G053300 Prunus persica HOM05D006103 ORTHO05D007468 4.0e-99 365.5 321 68.2
Haze_08348 Corylus avellana HOM05D006103 ORTHO05D007468 1.2e-98 364.0 323 70.3
Gohir.A08G162200 Gossypium hirsutum HOM05D006103 ORTHO05D007468 1.5e-98 363.6 319 66.8
FvH4_5g20690 Fragaria vesca HOM05D006103 ORTHO05D007468 2.6e-98 362.8 325 67.7
Duzib205G0801 Durio zibethinus HOM05D006103 ORTHO05D007468 3.4e-98 362.5 317 66.2
CSS0016826 Camellia sinensis var. sinensis HOM05D006103 ORTHO05D007468 4.5e-98 362.1 320 65.9
QL12p008443 Quercus lobata HOM05D006103 ORTHO05D007468 5.8e-98 361.7 317 68.5
CSS0027189 Camellia sinensis var. sinensis HOM05D006103 ORTHO05D007468 2.2e-97 359.8 316 67.7
FAN13G0941 Fragaria x ananassa HOM05D006103 ORTHO05D007468 2.2e-97 359.8 317 65.9
ClCG10G002100 Citrullus lanatus HOM05D006103 ORTHO05D007468 2.9e-97 359.4 326 67.2
RcHm_v2.0_Chr7g0206421 Rosa chinensis HOM05D006103 ORTHO05D007468 2.9e-97 359.4 328 68.6
FAN18G2558 Fragaria x ananassa HOM05D006103 ORTHO05D007468 3.8e-97 359.0 325 67.4
PGR042G3635 Punica granatum HOM05D006103 ORTHO05D007468 3.8e-97 359.0 318 68.9
FAN08G0488 Fragaria x ananassa HOM05D006103 ORTHO05D007468 6.4e-97 358.2 325 66.2
MD04G1054200 Malus domestica HOM05D006103 ORTHO05D007468 6.4e-97 358.2 336 64.6
Dinv25153 Davidia involucrata HOM05D006103 ORTHO05D007468 1.1e-96 357.5 316 65.8
FAN04G1103 Fragaria x ananassa HOM05D006103 ORTHO05D007468 1.4e-96 357.1 320 66.9
CANSAT21G0053 Cannabis sativa HOM05D006103 ORTHO05D007468 1.2e-95 354.0 311 67.2
Ciclev10021261m.g Citrus clementina HOM05D006103 ORTHO05D007468 1.6e-95 353.6 322 64.6
CsaV3_3G002190 Cucumis sativus L. HOM05D006103 ORTHO05D007468 1.6e-95 353.6 333 63.7
Atru.chr9.1156 Acer truncatum HOM05D006103 ORTHO05D007468 2.7e-95 352.8 318 64.8
MELO3C013891.2 Cucumis melo HOM05D006103 ORTHO05D007468 3.5e-95 352.4 340 67.9
Actinidia03414 Actinidia chinensis HOM05D006103 ORTHO05D007468 7.9e-95 351.3 312 67.6
Oeu054287.1 Olea europaea HOM05D006103 ORTHO05D007468 3.9e-94 349.0 323 62.2
Eucgr.E00334 Eucalyptus grandis HOM05D006103 ORTHO05D007468 8.7e-94 347.8 340 61.5
Sed0003222 Sechium edule HOM05D006103 ORTHO05D007468 1.1e-93 347.4 327 66.7
TWI60G1123 Tripterygium wilfordii HOM05D006103 ORTHO05D007468 1.1e-93 347.4 318 61.9
CAN.G422.12 Capsicum annuum HOM05D006103 ORTHO05D007468 3.3e-93 345.9 319 64.6
Nitab4.5_0000506g0180 Nicotiana tabacum HOM05D006103 ORTHO05D007468 3.3e-93 345.9 323 65.0
Lj8A286T53 Lonicera japonica HOM05D006103 ORTHO05D007468 5.6e-93 345.1 319 62.7
Lj8C280G0 Lonicera japonica HOM05D006103 ORTHO05D007468 6.2e-92 341.7 315 56.8
Potri.001G149800 Populus trichocarpa HOM05D006103 ORTHO05D007468 6.2e-92 341.7 316 63.0
Solyc06g060990.4 Solanum lycopersicum HOM05D006103 ORTHO05D007468 1.1e-91 340.9 323 63.8
Sabra01G0119800 Salix brachista HOM05D006103 ORTHO05D007468 2.4e-91 339.7 318 63.2
Sopen06g021130 Solanum pennellii HOM05D006103 ORTHO05D007468 3.1e-91 339.3 323 63.2
Cc08_g11160 Coffea canephora HOM05D006103 ORTHO05D007468 5.3e-91 338.6 313 62.3
Lsat_1_v5_gn_6_94780 Lactuca sativa HOM05D006103 ORTHO05D007468 1.5e-90 337.0 307 63.8
PGSC0003DMG400026583 Solanum tuberosum HOM05D006103 ORTHO05D007468 2.6e-90 336.3 322 64.3
Psat4g074520 Pisum sativum HOM05D006103 ORTHO05D007468 9.9e-90 334.3 318 58.5
Manes.17G024600 Manihot esculenta HOM05D006103 ORTHO05D007468 1.7e-89 333.6 316 63.3
MBI04_g46823_MAGBIO Magnolia biondii HOM05D006103 ORTHO05D007468 2.2e-89 333.2 315 63.5
Cpa.g.sc98.70 Carica papaya HOM05D006103 ORTHO05D007468 4.9e-89 332.0 323 54.2
BraA02t08094Z Brassica rapa HOM05D006103 ORTHO05D007468 6.4e-89 331.6 320 57.2
Sp2g11900 Schrenkiella parvula HOM05D006103 ORTHO05D007468 1.1e-88 330.9 318 61.3
HanXRQChr03g0089621 Helianthus annuus HOM05D006103 ORTHO05D007468 2.4e-88 329.7 315 61.6
MSTRG.13771 Avicennia marina HOM05D006103 ORTHO05D007468 4.2e-88 328.9 321 57.0
A02p30800 Brassica napus HOM05D006103 ORTHO05D007468 7.1e-88 328.2 320 56.6
DCAR_004514 Daucus carota HOM05D006103 ORTHO05D007468 7.1e-88 328.2 322 62.4
Carub.0008s0066 Capsella rubella HOM05D006103 ORTHO05D007468 9.3e-88 327.8 321 59.8
TPR.G25737 Trifolium pratense HOM05D006103 ORTHO05D007468 6.0e-87 325.1 334 61.4
CARHR174300 Cardamine hirsuta HOM05D006103 ORTHO05D007468 7.9e-87 324.7 318 57.2
PSO063G5173 Papaver somniferum HOM05D006103 ORTHO05D007468 1.0e-86 324.3 324 61.7
Aqoxy3G02600 Aquilegia oxysepala HOM05D006103 ORTHO05D007468 6.7e-86 321.6 316 62.7
AL8G11110 Arabidopsis lyrata HOM05D006103 ORTHO05D007468 1.1e-85 320.9 319 59.2
BcaC03g16934 Brassica carinata HOM05D006103 ORTHO05D007468 1.5e-85 320.5 320 58.8
SGA_v2.0_scaffold20G09256 Striga asiatica HOM05D006103 ORTHO05D007468 1.9e-85 320.1 325 57.8
C02p48360 Brassica napus HOM05D006103 ORTHO05D007468 5.6e-85 318.5 320 54.7
BolC2t10867H Brassica oleracea HOM05D006103 ORTHO05D007468 5.6e-85 318.5 320 54.7
Thhalv10000969m.g Eutrema salsugineum HOM05D006103 ORTHO05D007468 9.6e-85 317.8 320 57.5
AUR62007192 Chenopodium quinoa HOM05D006103 ORTHO05D007468 2.1e-84 316.6 319 53.6
C02p28550 Brassica napus HOM05D006103 ORTHO05D007468 2.4e-83 313.2 320 58.1
BolC2t08897H Brassica oleracea HOM05D006103 ORTHO05D007468 2.4e-83 313.2 320 58.1
AT5G47090 Arabidopsis thaliana HOM05D006103 ORTHO05D007468 1.2e-82 310.8 318 62.3
BcaC03g15262 Brassica carinata HOM05D006103 ORTHO05D007468 2.0e-82 310.1 320 57.8
vmacro00388 Vaccinium macrocarpon HOM05D006103 ORTHO05D007468 8.4e-81 304.7 398 47.0
CDE02G1890 Ceratophyllum demersum HOM05D006103 ORTHO05D007468 5.5e-80 302.0 318 52.8
ECA240G1687 Erigeron canadensis HOM05D005140 ORTHO05D006288 2.7e-79 299.7 293 57.3
unitig_699.g19773 Utricularia gibba HOM05D006103 ORTHO05D007468 1.3e-78 297.4 332 56.9
Aa31LG9G5870 Aethionema arabicum HOM05D006103 ORTHO05D007468 2.5e-77 293.1 351 57.5
GSVIVG01013285001 Vitis vinifera HOM05D006103 ORTHO05D007468 5.7e-77 292.0 187 73.8
Migut.E01036 Erythranthe guttata HOM05D006103 ORTHO05D007468 1.6e-76 290.4 317 53.9
Migut.E01310 Erythranthe guttata HOM05D006103 ORTHO05D007468 1.6e-76 290.4 317 53.9
EL10Ac5g12236 Beta vulgaris HOM05D006103 ORTHO05D007468 2.2e-76 290.0 321 57.3
Hund11307 Selenicereus undatus HOM05D006103 ORTHO05D007468 4.8e-76 288.9 272 62.9
Zm00001eb377550 Zea mays HOM05D006103 ORTHO05D007468 3.1e-75 286.2 337 51.3
SHI07660 Sapria himalayana HOM05D006103 ORTHO05D007468 4.1e-75 285.8 311 57.2
Os06g0139700 Oryza sativa ssp. japonica HOM05D006103 ORTHO05D007468 3.4e-74 282.7 322 56.2
Peaxi162Scf00190g00616 Petunia axillaris HOM05D006103 ORTHO05D007468 3.4e-74 282.7 266 65.8
Dinv28889 Davidia involucrata HOM05D006103 ORTHO05D007468 4.5e-74 282.3 191 70.7
Sc22g0001160 Simmondsia chinensis HOM05D006103 ORTHO05D007468 1.9e-72 276.9 192 67.7
Rhsim04G0176100 Rhododendron simsii HOM05D006103 ORTHO05D007468 7.2e-72 275.0 264 62.5
CANSAT21G0160 Cannabis sativa HOM05D001479 ORTHO05D007468 1.2e-71 274.2 183 70.5
CANSAT21G1035 Cannabis sativa HOM05D006103 ORTHO05D007468 1.2e-71 274.2 183 70.5
ATR0665G401 Amborella trichopoda HOM05D006103 ORTHO05D007468 2.7e-71 273.1 314 56.4
SEGI_16450 Sequoiadendron giganteum HOM05D006103 ORTHO05D007468 4.3e-69 265.8 319 49.5
CDE11G0859 Ceratophyllum demersum HOM05D006103 ORTHO05D007468 1.8e-67 260.4 267 55.1
BcaC07g39778 Brassica carinata HOM05D006103 ORTHO05D007468 7.7e-66 255.0 320 53.1
Nitab4.5_0013289g0030 Nicotiana tabacum HOM05D006103 ORTHO05D007468 3.6e-63 246.1 240 64.6
HPP92_014398 Vanilla planifolia HOM05D006103 ORTHO05D007468 1.3e-57 227.6 192 57.3
Hma1.2p1_1672F.1_g296810 Hydrangea macrophylla HOM05D006103 ORTHO05D007468 7.4e-53 211.8 222 59.0
Pp3c16_2730 Physcomitrium patens HOM05D006103 ORTHO05D007468 2.8e-52 209.9 330 41.8
BolC8t50609H Brassica oleracea HOM05D006103 ORTHO05D007468 6.5e-49 198.7 154 63.0
AUR62018811 Chenopodium quinoa HOM05D006103 ORTHO05D007468 2.1e-47 193.7 212 50.9
Lj8A284T15 Lonicera japonica HOM05D006103 ORTHO05D007468 6.3e-44 182.2 137 63.5
C08p30000 Brassica napus HOM05D006103 ORTHO05D007468 7.0e-43 178.7 140 62.1
AagrBONN_evm.TU.Sc2ySwM_368.2081 Anthoceros agrestis HOM05D006103 ORTHO05D007468 1.3e-41 174.5 313 39.9
SMO171G0121 Selaginella moellendorffii HOM05D006103 ORTHO05D007468 3.8e-41 172.9 318 39.3
CBR_g49667 Chara braunii HOM05D006103 ORTHO05D007468 2.3e-38 163.7 417 35.5
AL8G11000 Arabidopsis lyrata HOM05D006103 ORTHO05D007468 8.3e-28 128.6 162 57.4
RcHm_v2.0_Chr4g0446321 Rosa chinensis HOM05D006103 ORTHO05D007468 1.6e-23 114.4 196 40.3
Actinidia02205 Actinidia chinensis HOM05D006103 ORTHO05D007468 2.8e-23 113.6 69 78.3
SHI06573 Sapria himalayana HOM05D006103 ORTHO05D007468 8.0e-23 112.1 122 48.4
Cfa012348 Carpinus fangiana HOM05D006103 ORTHO05D007468 6.8e-22 109.0 73 72.6
Lj8A284T12 Lonicera japonica HOM05D006103 ORTHO05D007468 2.0e-21 107.5 137 45.3
MCO11G792 Micromonas commoda HOM05D006103 ORTHO05D007468 5.8e-21 105.9 337 27.6
COL.COLO4_06694 Corchorus olitorius HOM05D006103 ORTHO05D007468 4.6e-18 96.3 59 79.7
RcHm_v2.0_Chr6g0308851 Rosa chinensis HOM05D006103 ORTHO05D007468 4.3e-16 89.7 54 83.3
SHI06574 Sapria himalayana HOM05D006103 ORTHO05D007468 5.6e-16 89.4 155 35.5
Lj8C284T4 Lonicera japonica HOM05D006103 ORTHO05D007468 4.7e-15 86.3 55 69.1
CARHR174410 Cardamine hirsuta HOM05D006103 ORTHO05D007468 8.9e-14 82.0 46 84.8
Carub.0008s0069 Capsella rubella HOM05D006103 ORTHO05D007468 4.9e-12 76.3 56 67.9
Actinidia25920 Actinidia chinensis HOM05D006103 ORTHO05D007468 3.2e-11 73.6 76 55.3
Cre03.g170100 Chlamydomonas reinhardtii HOM05D006103 ORTHO05D007468 4.6e-10 69.7 138 34.1
arahy.Tifrunner.gnm1.ann1.NKK7HF Arachis hypogaea HOM05D006103 ORTHO05D007468 3.0e-09 67.0 94 63.8
Rhsim04G0176300 Rhododendron simsii HOM05D006103 ORTHO05D007468 6.6e-09 65.9 55 58.2
Lj8A280T20 Lonicera japonica HOM05D006103 ORTHO05D007468 8.6e-09 65.5 44 72.7


User provided reference genes

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