Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G225600 Phaseolus vulgaris HOM05D006150 ORTHO05D007745 1.2e-174 616.3 297 100.0
VMungo0251G1767 Vigna mungo HOM05D006150 ORTHO05D007745 3.3e-164 581.6 297 92.9
Glyma.17G148400 Glycine max HOM05D006150 ORTHO05D007745 1.5e-159 566.2 294 90.8
Glyma.05G066500 Glycine max HOM05D006150 ORTHO05D007745 5.2e-157 557.8 295 89.8
arahy.Tifrunner.gnm1.ann1.IPM3U6 Arachis hypogaea HOM05D006150 ORTHO05D007745 3.5e-145 518.5 294 81.3
arahy.Tifrunner.gnm1.ann1.YY6LCE Arachis hypogaea HOM05D006150 ORTHO05D007745 6.1e-142 507.7 294 80.6
TPR.G25747 Trifolium pratense HOM05D006150 ORTHO05D007745 1.4e-141 506.5 294 80.3
Lj4g0002003 Lotus japonicus HOM05D006150 ORTHO05D007745 6.8e-141 504.2 297 80.1
Ca_22017_v3 Cicer arietinum L. HOM05D006150 ORTHO05D007745 1.2e-140 503.4 295 79.7
Lalb_Chr09g0329771 Lupinus albus HOM05D006150 ORTHO05D007745 1.7e-139 499.6 301 79.1
Medtr4g099290 Medicago truncatula HOM05D006150 ORTHO05D007745 4.9e-139 498.0 298 80.2
Solyc08g077840.3 Solanum lycopersicum HOM05D006150 ORTHO05D007745 6.8e-133 477.6 295 73.6
Sopen08g026350 Solanum pennellii HOM05D006150 ORTHO05D007745 3.4e-132 475.3 295 73.2
PGSC0003DMG400026243 Solanum tuberosum HOM05D006150 ORTHO05D007745 1.7e-131 473.0 295 73.2
Duzib084G0008 Durio zibethinus HOM05D006150 ORTHO05D007745 3.7e-131 471.9 289 73.7
TAR636G1440 Trochodendron aralioides HOM05D006150 ORTHO05D007745 8.3e-131 470.7 294 72.8
Gohir.A12G212700 Gossypium hirsutum HOM05D006150 ORTHO05D007745 1.1e-130 470.3 297 72.1
Gorai.008G230800 Gossypium raimondii HOM05D006150 ORTHO05D007745 1.1e-130 470.3 297 71.7
THA.LOC104807929 Tarenaya hassleriana HOM05D006150 ORTHO05D007745 1.4e-130 469.9 290 73.4
COL.COLO4_07285 Corchorus olitorius HOM05D006150 ORTHO05D007745 1.9e-130 469.5 288 73.6
Hma1.2p1_0570F.1_g180430 Hydrangea macrophylla HOM05D006150 ORTHO05D007745 4.1e-130 468.4 288 73.6
CSS0019555 Camellia sinensis var. sinensis HOM05D006150 ORTHO05D007745 9.2e-130 467.2 297 71.4
Gohir.D12G215200 Gossypium hirsutum HOM05D006150 ORTHO05D007745 9.2e-130 467.2 297 71.0
CAN.G572.11 Capsicum annuum HOM05D006150 ORTHO05D007745 2.7e-129 465.7 297 72.4
Thecc.03G240100 Theobroma cacao HOM05D006150 ORTHO05D007745 2.7e-129 465.7 295 71.5
MSTRG.6640 Avicennia marina HOM05D006150 ORTHO05D007745 6.0e-129 464.5 294 71.8
EL10Ac5g12270 Beta vulgaris HOM05D006150 ORTHO05D007745 6.0e-129 464.5 293 73.7
CiPaw.11G072300 Carya illinoinensis HOM05D006150 ORTHO05D007745 6.0e-129 464.5 292 72.6
MBI04_g13858_MAGBIO Magnolia biondii HOM05D006150 ORTHO05D007745 6.0e-129 464.5 295 71.9
Rhsim07G0136400 Rhododendron simsii HOM05D006150 ORTHO05D007745 2.3e-128 462.6 294 71.8
CARHR223610 Cardamine hirsuta HOM05D006150 ORTHO05D007745 5.0e-128 461.5 298 71.1
Psat4g076080 Pisum sativum HOM05D006150 ORTHO05D007745 1.9e-127 459.5 277 78.7
Cfa012327 Carpinus fangiana HOM05D006150 ORTHO05D007745 4.3e-127 458.4 292 72.6
Ciclev10021365m.g Citrus clementina HOM05D006150 ORTHO05D007745 7.3e-127 457.6 294 71.4
Eucgr.D02133 Eucalyptus grandis HOM05D006150 ORTHO05D007745 9.5e-127 457.2 293 71.7
Lj8A277T42 Lonicera japonica HOM05D006150 ORTHO05D007745 9.5e-127 457.2 285 71.9
Atru.chr9.1206 Acer truncatum HOM05D006150 ORTHO05D007745 1.2e-126 456.8 291 72.2
MD04G1055500 Malus domestica HOM05D006150 ORTHO05D007745 1.6e-126 456.4 295 71.9
Potri.003G083600 Populus trichocarpa HOM05D006150 ORTHO05D007745 1.6e-126 456.4 302 71.2
AT4G17050 Arabidopsis thaliana HOM05D006150 ORTHO05D007745 3.6e-126 455.3 298 70.1
BolC1t02493H Brassica oleracea HOM05D006150 ORTHO05D007745 3.6e-126 455.3 296 70.9
BcaNung04656 Brassica carinata HOM05D006150 ORTHO05D007745 4.7e-126 454.9 295 70.8
CANSAT21G0710 Cannabis sativa HOM05D006150 ORTHO05D007745 4.7e-126 454.9 295 70.8
RcHm_v2.0_Chr7g0205681 Rosa chinensis HOM05D006150 ORTHO05D007745 4.7e-126 454.9 295 72.9
AL7G37660 Arabidopsis lyrata HOM05D006150 ORTHO05D007745 6.2e-126 454.5 289 71.3
BraA03t14117Z Brassica rapa HOM05D006150 ORTHO05D007745 6.2e-126 454.5 302 69.9
Nn6g33757 Nelumbo nucifera HOM05D006150 ORTHO05D007745 8.0e-126 454.1 295 70.5
Carub.0007s2437 Capsella rubella HOM05D006150 ORTHO05D007745 1.4e-125 453.4 299 69.9
SalBow7G3619 Salvia bowleyana HOM05D006150 ORTHO05D007745 1.4e-125 453.4 278 73.0
ECA234G2169 Erigeron canadensis HOM05D006150 ORTHO05D007745 1.8e-125 453.0 291 71.1
TWI60G0542 Tripterygium wilfordii HOM05D006150 ORTHO05D007745 1.8e-125 453.0 288 70.5
Sp7g17140 Schrenkiella parvula HOM05D006150 ORTHO05D007745 2.3e-125 452.6 299 69.9
C07p48520 Brassica napus HOM05D006150 ORTHO05D007745 3.1e-125 452.2 302 69.5
BolC7t45360H Brassica oleracea HOM05D006150 ORTHO05D007745 3.1e-125 452.2 302 69.5
PGR031G0533 Punica granatum HOM05D006150 ORTHO05D007745 3.1e-125 452.2 259 78.4
BraA01t01953Z Brassica rapa HOM05D006150 ORTHO05D007745 5.2e-125 451.4 295 70.5
Sed0022790 Sechium edule HOM05D006150 ORTHO05D007745 5.2e-125 451.4 278 71.6
PSO732G0290 Papaver somniferum HOM05D006150 ORTHO05D007745 8.9e-125 450.7 279 73.5
C07p48460 Brassica napus HOM05D006150 ORTHO05D007745 1.2e-124 450.3 300 70.0
A03p50280 Brassica napus HOM05D006150 ORTHO05D007745 1.5e-124 449.9 302 69.5
CsaV3_3G004750 Cucumis sativus L. HOM05D006150 ORTHO05D007745 2.0e-124 449.5 294 69.7
PSO675G6476 Papaver somniferum HOM05D006150 ORTHO05D007745 2.0e-124 449.5 279 73.1
ClCG10G005070 Citrullus lanatus HOM05D006150 ORTHO05D007745 4.4e-124 448.4 295 68.5
Manes.01G089000 Manihot esculenta HOM05D006150 ORTHO05D007745 4.4e-124 448.4 279 74.2
BcaNung00130 Brassica carinata HOM05D006150 ORTHO05D007745 5.8e-124 448.0 297 70.7
HanXRQChr17g0534011 Helianthus annuus HOM05D006150 ORTHO05D007745 1.7e-123 446.4 297 69.4
Ah.12g053980 Amaranthus hybridus HOM05D006150 ORTHO05D007745 3.7e-123 445.3 291 69.8
Cc08_g11330 Coffea canephora HOM05D006150 ORTHO05D007745 4.9e-123 444.9 291 69.8
Haze_08363 Corylus avellana HOM05D006150 ORTHO05D007745 6.4e-123 444.5 317 67.5
BcaC06g33538 Brassica carinata HOM05D006150 ORTHO05D007745 8.3e-123 444.1 294 69.4
DCAR_008330 Daucus carota HOM05D006150 ORTHO05D007745 1.9e-122 443.0 294 69.7
C07p48390 Brassica napus HOM05D006150 ORTHO05D007745 2.4e-122 442.6 301 69.1
FvH4_5g20400 Fragaria vesca HOM05D006150 ORTHO05D007745 2.7e-121 439.1 296 70.3
FAN04G1813 Fragaria x ananassa HOM05D006150 ORTHO05D007745 6.0e-121 438.0 300 70.3
FAN08G0760 Fragaria x ananassa HOM05D006150 ORTHO05D007745 1.3e-120 436.8 294 71.4
Nitab4.5_0009451g0030 Nicotiana tabacum HOM05D006150 ORTHO05D007745 2.5e-119 432.6 301 68.1
Nitab4.5_0000500g0240 Nicotiana tabacum HOM05D006150 ORTHO05D007745 9.5e-119 430.6 297 68.4
PSO732G0039 Papaver somniferum HOM05D006150 ORTHO05D007745 1.6e-118 429.9 273 72.2
Aqoxy5G02622 Aquilegia oxysepala HOM05D006150 ORTHO05D007745 2.1e-118 429.5 290 68.6
A01p20260 Brassica napus HOM05D006150 ORTHO05D007745 2.1e-118 429.5 282 70.9
Os07g0495000 Oryza sativa ssp. japonica HOM05D006150 ORTHO05D007745 4.7e-118 428.3 280 69.6
ATR0665G013 Amborella trichopoda HOM05D006150 ORTHO05D007745 6.2e-118 427.9 294 68.4
Peaxi162Scf00301g00519 Petunia axillaris HOM05D006150 ORTHO05D007745 6.8e-117 424.5 286 68.9
unitig_746.g26644 Utricularia gibba HOM05D006150 ORTHO05D007745 8.9e-117 424.1 292 65.1
CDE12G0966 Ceratophyllum demersum HOM05D006150 ORTHO05D007745 1.5e-116 423.3 296 65.2
Zm00001eb322060 Zea mays HOM05D006150 ORTHO05D007745 4.9e-115 418.3 276 69.2
QL12p008732 Quercus lobata HOM05D006150 ORTHO05D007745 1.4e-114 416.8 399 54.4
HPP92_025744 Vanilla planifolia HOM05D006150 ORTHO05D007745 6.6e-112 407.9 281 67.6
SEGI_33649 Sequoiadendron giganteum HOM05D006150 ORTHO05D007745 2.5e-111 406.0 293 64.8
Thhalv10026866m.g Eutrema salsugineum HOM05D006150 ORTHO05D007745 9.5e-111 404.1 310 64.2
Aa31LG2G13130 Aethionema arabicum HOM05D006150 ORTHO05D007745 2.6e-108 396.0 322 61.2
vmacro00832 Vaccinium macrocarpon HOM05D006150 ORTHO05D007745 2.6e-108 396.0 295 63.4
BcaC09g50439 Brassica carinata HOM05D006150 ORTHO05D007745 1.4e-106 390.2 297 63.3
C01p25410 Brassica napus HOM05D006150 ORTHO05D007745 1.4e-106 390.2 297 63.3
Actinidia02195 Actinidia chinensis HOM05D006150 ORTHO05D007745 5.1e-104 381.7 259 68.7
Dinv28876 Davidia involucrata HOM05D006150 ORTHO05D007745 5.6e-103 378.3 247 70.0
Sc01g0007980 Simmondsia chinensis HOM05D006150 ORTHO05D007745 4.0e-101 372.1 246 69.5
Mapoly0072s0097 Marchantia polymorpha HOM05D006150 ORTHO05D007745 4.6e-97 358.6 258 62.8
AagrBONN_evm.TU.Sc2ySwM_228.2274 Anthoceros agrestis HOM05D006150 ORTHO05D007745 1.0e-96 357.5 255 66.3
Prupe.5G055300 Prunus persica HOM05D006150 ORTHO05D007745 3.9e-96 355.5 211 76.3
Oeu012348.1 Olea europaea HOM05D006150 ORTHO05D007745 2.5e-95 352.8 209 76.1
Pp3c9_12580 Physcomitrium patens HOM05D006150 ORTHO05D007745 4.3e-95 352.1 268 61.2
AUR62018839 Chenopodium quinoa HOM05D006150 ORTHO05D007745 5.8e-92 341.7 201 77.1
AUR62007167 Chenopodium quinoa HOM05D006150 ORTHO05D007745 7.6e-92 341.3 201 77.6
SGA_v2.0_scaffold181G39680 Striga asiatica HOM05D006150 ORTHO05D007745 1.3e-91 340.5 242 66.9
GSVIVG01003685001 Vitis vinifera HOM05D006150 ORTHO05D007745 4.9e-91 338.6 279 60.6
Lsat_1_v5_gn_3_15361 Lactuca sativa HOM05D006150 ORTHO05D007745 2.8e-86 322.8 249 61.8
MCO07G379 Micromonas commoda HOM05D006150 ORTHO05D007745 1.4e-69 267.3 266 48.9
Cre06.g290000 Chlamydomonas reinhardtii HOM05D006150 ORTHO05D007745 1.5e-68 263.8 252 51.2
Actinidia25909 Actinidia chinensis HOM05D006150 ORTHO05D007745 1.4e-66 257.3 296 46.6
Potri.001G150800 Populus trichocarpa HOM05D006150 ORTHO05D007745 1.7e-62 243.8 195 60.0
MCO04G282 Micromonas commoda HOM05D006150 ORTHO05D007745 5.9e-60 235.3 261 47.9
MD06G1047100 Malus domestica HOM05D006150 ORTHO05D007745 1.7e-59 233.8 262 49.2
MELO3C014174.2 Cucumis melo HOM05D006150 ORTHO05D007745 2.5e-50 203.4 288 42.7
Hma1.2p1_0570F.1_g180440 Hydrangea macrophylla HOM05D006150 ORTHO05D007745 3.0e-48 196.4 128 69.5
Sabra01G0120800 Salix brachista HOM05D006150 ORTHO05D007745 2.2e-46 190.3 175 56.0
FAN18G0603 Fragaria x ananassa HOM05D006150 ORTHO05D007745 1.4e-40 171.0 141 59.6
CSS0048254 Camellia sinensis var. sinensis HOM05D006150 ORTHO05D007745 1.2e-39 167.9 96 79.2
Sabra01G0120600 Salix brachista HOM05D006150 ORTHO05D007745 2.4e-37 160.2 162 53.1
Cpa.g.sc98.38 Carica papaya HOM05D006150 ORTHO05D007745 2.2e-30 137.1 80 72.5
PSO717G0125 Papaver somniferum HOM05D006150 ORTHO05D007745 6.3e-30 135.6 91 63.7
CBR_g38093 Chara braunii HOM05D006150 ORTHO05D007745 1.6e-28 131.0 66 81.8
BcaC01g03436 Brassica carinata HOM05D006150 ORTHO05D007745 5.9e-28 129.0 99 59.6
GSVIVG01021810001 Vitis vinifera HOM05D006150 ORTHO05D007745 1.4e-13 81.3 67 53.7
Cpa.g.sc98.35 Carica papaya HOM05D006150 ORTHO05D007745 1.9e-13 80.9 56 62.5
Oeu040463.1 Olea europaea HOM05D001574 ORTHO05D000708 1.2e-09 68.2 57 54.4
MELO3C000773.2 Cucumis melo HOM05D006150 ORTHO05D007745 5.8e-07 59.3 40 67.5
Lsat_1_v5_gn_6_74120 Lactuca sativa HOM05D006150 ORTHO05D233887 5.8e-07 59.3 33 72.7
Lsat_1_v5_gn_2_23540 Lactuca sativa HOM05D002379 ORTHO05D003469 1.3e-06 58.2 48 52.1
Lsat_1_v5_gn_8_14120 Lactuca sativa HOM05D002379 ORTHO05D021531 1.3e-06 58.2 48 52.1
Lsat_1_v5_gn_9_81181 Lactuca sativa HOM05D002379 ORTHO05D003469 1.3e-06 58.2 48 52.1


User provided reference genes

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