Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G222500 Phaseolus vulgaris HOM05D006677 ORTHO05D008348 0.0e+00 1505.7 770 100.0
VMungo0251G0668 Vigna mungo HOM05D006677 ORTHO05D008348 0.0e+00 1395.9 771 92.5
Glyma.17G143800 Glycine max HOM05D006677 ORTHO05D008348 0.0e+00 1198.7 783 80.7
Ca_21980_v3 Cicer arietinum L. HOM05D006677 ORTHO05D008348 1.1e-302 1043.1 794 70.3
Lj4g0000262 Lotus japonicus HOM05D006677 ORTHO05D008348 1.2e-301 1039.6 787 69.9
Medtr4g100700 Medicago truncatula HOM05D006677 ORTHO05D008348 4.3e-288 994.6 791 66.9
Psat4g072920 Pisum sativum HOM05D006677 ORTHO05D008348 2.1e-287 992.3 765 70.7
arahy.Tifrunner.gnm1.ann1.WU4RWF Arachis hypogaea HOM05D006677 ORTHO05D008348 1.4e-283 979.5 815 64.3
arahy.Tifrunner.gnm1.ann1.IBE8NF Arachis hypogaea HOM05D006677 ORTHO05D008348 3.9e-281 971.5 815 63.6
Lalb_Chr05g0221161 Lupinus albus HOM05D006677 ORTHO05D008348 7.3e-280 967.2 787 67.0
Glyma.05G062000 Glycine max HOM05D006677 ORTHO05D008348 5.3e-254 881.3 578 82.2
Cfa012688 Carpinus fangiana HOM05D006677 ORTHO05D008348 3.2e-243 845.5 793 57.4
CANSAT21G0792 Cannabis sativa HOM05D006677 ORTHO05D008348 1.6e-242 843.2 812 56.0
Thecc.03G248200 Theobroma cacao HOM05D006677 ORTHO05D008348 7.9e-242 840.9 804 57.2
Haze_07944 Corylus avellana HOM05D006677 ORTHO05D008348 2.3e-241 839.3 859 53.9
CiPaw.12G050300 Carya illinoinensis HOM05D006677 ORTHO05D008348 3.0e-241 839.0 799 57.1
QL12p011426 Quercus lobata HOM05D006677 ORTHO05D008348 1.5e-240 836.6 857 53.8
COL.COLO4_37128 Corchorus olitorius HOM05D006677 ORTHO05D008348 9.7e-240 833.9 807 57.1
Manes.02G041400 Manihot esculenta HOM05D006677 ORTHO05D008348 2.2e-236 822.8 796 55.3
Gorai.008G233700 Gossypium raimondii HOM05D006677 ORTHO05D008348 4.2e-235 818.5 805 55.9
Prupe.5G065400 Prunus persica HOM05D006677 ORTHO05D008348 5.1e-233 811.6 808 55.1
CSS0025591 Camellia sinensis var. sinensis HOM05D006677 ORTHO05D008348 8.8e-233 810.8 787 55.5
Gohir.D12G218100 Gossypium hirsutum HOM05D006677 ORTHO05D008348 1.1e-232 810.4 805 55.5
Duzib068G0477 Durio zibethinus HOM05D006677 ORTHO05D008348 2.2e-231 806.2 807 55.3
Lj2C223G6 Lonicera japonica HOM05D006677 ORTHO05D008348 8.2e-231 804.3 791 55.0
Hma1.2p1_0316F.1_g122840 Hydrangea macrophylla HOM05D006677 ORTHO05D008348 1.4e-230 803.5 789 54.1
Gohir.A12G215500 Gossypium hirsutum HOM05D006677 ORTHO05D008348 1.8e-230 803.1 802 55.5
Potri.001G155800 Populus trichocarpa HOM05D006677 ORTHO05D008348 2.4e-230 802.7 799 55.6
TWI60G0317 Tripterygium wilfordii HOM05D006677 ORTHO05D008348 4.1e-230 802.0 792 53.3
MD04G1060300 Malus domestica HOM05D006677 ORTHO05D008348 7.7e-229 797.7 808 54.7
MD06G1053300 Malus domestica HOM05D006677 ORTHO05D008348 3.8e-228 795.4 806 54.6
PGR031G0681 Punica granatum HOM05D006677 ORTHO05D008348 1.2e-226 790.4 810 52.8
Sopen08g026930 Solanum pennellii HOM05D006677 ORTHO05D008348 1.4e-225 786.9 786 53.8
Solyc08g078440.3 Solanum lycopersicum HOM05D006677 ORTHO05D008348 2.3e-225 786.2 786 53.8
TAR374G0600 Trochodendron aralioides HOM05D006677 ORTHO05D008348 3.0e-225 785.8 804 52.6
Nitab4.5_0001381g0100 Nicotiana tabacum HOM05D006677 ORTHO05D008348 3.3e-224 782.3 796 53.0
CSS0006614 Camellia sinensis var. sinensis HOM05D006677 ORTHO05D008348 4.4e-224 781.9 787 54.3
Migut.A01134 Erythranthe guttata HOM05D006677 ORTHO05D008348 1.7e-223 780.0 806 52.7
Cc08_g12180 Coffea canephora HOM05D006677 ORTHO05D008348 3.7e-223 778.9 781 53.6
FAN18G1193 Fragaria x ananassa HOM05D006677 ORTHO05D008348 9.1e-222 774.2 802 54.1
RcHm_v2.0_Chr7g0203921 Rosa chinensis HOM05D006677 ORTHO05D008348 9.1e-222 774.2 796 54.8
FAN13G0013 Fragaria x ananassa HOM05D006677 ORTHO05D008348 1.2e-221 773.9 806 54.2
Atru.chr9.1276 Acer truncatum HOM05D006677 ORTHO05D008348 1.6e-221 773.5 799 54.6
FAN04G1892 Fragaria x ananassa HOM05D006677 ORTHO05D008348 2.0e-221 773.1 805 53.9
FvH4_5g19410 Fragaria vesca HOM05D006677 ORTHO05D008348 5.9e-221 771.5 802 54.1
Ciclev10018892m.g Citrus clementina HOM05D006677 ORTHO05D008348 1.0e-220 770.8 812 53.4
MSTRG.12123 Avicennia marina HOM05D006677 ORTHO05D008348 2.9e-220 769.2 787 52.9
Peaxi162Scf00209g00130 Petunia axillaris HOM05D006677 ORTHO05D008348 8.5e-220 767.7 777 52.3
FAN08G3018 Fragaria x ananassa HOM05D006677 ORTHO05D008348 1.5e-219 766.9 804 53.9
CAN.G1178.20 Capsicum annuum HOM05D006677 ORTHO05D008348 3.2e-219 765.8 790 52.5
Rhsim07G0111300 Rhododendron simsii HOM05D006677 ORTHO05D008348 3.6e-218 762.3 789 53.4
vmacro14066 Vaccinium macrocarpon HOM05D006677 ORTHO05D008348 1.4e-217 760.4 779 52.5
Nn6g33880 Nelumbo nucifera HOM05D006677 ORTHO05D008348 3.4e-216 755.7 813 51.3
SGA_v2.0_scaffold104G30177 Striga asiatica HOM05D006677 ORTHO05D008348 5.7e-216 755.0 826 49.9
Duzib205G2017 Durio zibethinus HOM05D006677 ORTHO05D008348 2.8e-215 752.7 806 53.3
Rhsim07G0110800 Rhododendron simsii HOM05D006677 ORTHO05D008348 1.4e-214 750.4 810 52.0
AL8G10640 Arabidopsis lyrata HOM05D006677 ORTHO05D008348 1.8e-214 750.0 800 51.1
Nitab4.5_0002289g0120 Nicotiana tabacum HOM05D006677 ORTHO05D008348 2.0e-213 746.5 789 51.7
Hund14577 Selenicereus undatus HOM05D006677 ORTHO05D008348 5.9e-213 745.0 792 51.9
THA.LOC104806670 Tarenaya hassleriana HOM05D006677 ORTHO05D008348 7.7e-213 744.6 798 52.1
CARHR173970 Cardamine hirsuta HOM05D006677 ORTHO05D008348 5.0e-212 741.9 804 50.7
AT5G47400 Arabidopsis thaliana HOM05D006677 ORTHO05D008348 4.2e-211 738.8 802 50.6
Manes.01G083200 Manihot esculenta HOM05D006677 ORTHO05D008348 9.4e-211 737.6 804 51.9
Carub.0008s0038 Capsella rubella HOM05D006677 ORTHO05D008348 1.4e-209 733.8 796 50.4
Sc22g0000980 Simmondsia chinensis HOM05D006677 ORTHO05D008348 2.3e-209 733.0 794 51.0
AUR62007111 Chenopodium quinoa HOM05D006677 ORTHO05D008348 1.5e-208 730.3 798 50.8
Aqoxy7G00821 Aquilegia oxysepala HOM05D006677 ORTHO05D008348 2.8e-207 726.1 805 50.4
Thhalv10000783m.g Eutrema salsugineum HOM05D006677 ORTHO05D008348 2.4e-206 723.0 798 50.3
Sp2g12115 Schrenkiella parvula HOM05D006677 ORTHO05D008348 2.4e-206 723.0 798 49.9
BolC7t43648H Brassica oleracea HOM05D006677 ORTHO05D008348 4.1e-206 722.2 793 50.6
C07p31040 Brassica napus HOM05D006677 ORTHO05D008348 2.0e-205 719.9 793 50.4
HanXRQChr16g0501081 Helianthus annuus HOM05D006677 ORTHO05D008348 2.7e-205 719.5 793 50.8
BcaC06g34255 Brassica carinata HOM05D006677 ORTHO05D008348 5.9e-205 718.4 796 50.4
AUR62019973 Chenopodium quinoa HOM05D006677 ORTHO05D008348 5.9e-205 718.4 798 49.6
EL10Ac5g12357 Beta vulgaris HOM05D006677 ORTHO05D008348 1.7e-204 716.8 797 50.6
DCAR_004989 Daucus carota HOM05D006677 ORTHO05D008348 5.0e-204 715.3 785 49.6
A06p45110 Brassica napus HOM05D006677 ORTHO05D008348 3.6e-202 709.1 788 49.9
SalBow6G5281 Salvia bowleyana HOM05D006677 ORTHO05D008348 8.0e-202 708.0 847 46.8
BraA06t27381Z Brassica rapa HOM05D006677 ORTHO05D008348 2.6e-200 703.0 786 49.5
Ah.12g054330 Amaranthus hybridus HOM05D006677 ORTHO05D008348 8.3e-199 698.0 799 50.2
Aa31sc151G40 Aethionema arabicum HOM05D006677 ORTHO05D008348 1.5e-195 687.2 762 50.5
Lsat_1_v5_gn_6_18041 Lactuca sativa HOM05D006677 ORTHO05D008348 2.8e-194 682.9 784 49.2
Dinv21656 Davidia involucrata HOM05D006677 ORTHO05D008348 4.1e-190 669.1 650 55.8
Eucgr.D02100 Eucalyptus grandis HOM05D006677 ORTHO05D008348 5.6e-187 658.7 585 58.1
HanXRQChr08g0227751 Helianthus annuus HOM05D006677 ORTHO05D008348 3.1e-185 652.9 797 46.9
Oeu017057.2 Olea europaea HOM05D006677 ORTHO05D008348 2.2e-183 646.7 832 46.8
ECA233G6125 Erigeron canadensis HOM05D006677 ORTHO05D008348 4.9e-183 645.6 736 49.6
Actinidia26803 Actinidia chinensis HOM05D006677 ORTHO05D008348 1.4e-182 644.0 634 54.3
Sabra01G0125500 Salix brachista HOM05D006677 ORTHO05D008348 1.2e-181 641.0 637 54.0
CDE11G0086 Ceratophyllum demersum HOM05D006677 ORTHO05D008348 3.3e-179 632.9 778 45.0
BcaC06g31390 Brassica carinata HOM05D006677 ORTHO05D008348 5.1e-172 609.0 665 49.8
HPP92_022463 Vanilla planifolia HOM05D006677 ORTHO05D008348 1.6e-170 604.0 809 44.1
BcaC06g31392 Brassica carinata HOM05D006677 ORTHO05D008348 6.2e-162 575.5 779 44.9
ATR0057G118 Amborella trichopoda HOM05D006677 ORTHO05D008348 8.4e-151 538.5 784 42.1
Zm00001eb000330 Zea mays HOM05D006677 ORTHO05D008348 3.7e-138 496.5 773 39.1
TPR.G37689 Trifolium pratense HOM05D006677 ORTHO05D008348 1.3e-130 471.5 305 78.4
TPR.G36090 Trifolium pratense HOM05D006677 ORTHO05D008348 7.2e-118 429.1 405 65.2
Actinidia10841 Actinidia chinensis HOM05D006677 ORTHO05D008348 5.7e-115 419.5 776 37.1
unitig_21.g20314 Utricularia gibba HOM05D006677 ORTHO05D008348 2.4e-97 360.9 781 33.3
GSVIVG01006275001 Vitis vinifera HOM05D006677 ORTHO05D000005 2.6e-91 340.9 260 65.8
DCAR_004986 Daucus carota HOM05D006677 ORTHO05D008348 5.0e-87 326.6 290 55.5
Pp3c19_23280 Physcomitrium patens HOM05D006677 ORTHO05D008348 8.6e-87 325.9 872 31.8
DCAR_004979 Daucus carota HOM05D006677 ORTHO05D008348 5.6e-86 323.2 290 54.1
Cpa.g.sc3684.1 Carica papaya HOM05D006677 ORTHO05D008348 3.4e-83 313.9 257 59.9
AagrBONN_evm.TU.Sc2ySwM_228.2440 Anthoceros agrestis HOM05D006677 ORTHO05D008348 7.1e-65 253.1 859 26.9
GSVIVG01006276001 Vitis vinifera HOM05D006677 ORTHO05D008348 6.4e-50 203.4 259 48.6
TAR365G0661 Trochodendron aralioides HOM05D006677 ORTHO05D008348 2.1e-48 198.4 264 43.2
DCAR_004983 Daucus carota HOM05D006677 ORTHO05D008348 7.3e-46 189.9 225 44.4
DCAR_004974 Daucus carota HOM05D006677 ORTHO05D008348 1.2e-43 182.6 209 45.0
TAR633G2042 Trochodendron aralioides HOM05D006677 ORTHO05D008348 3.8e-42 177.6 195 49.7
DCAR_004984 Daucus carota HOM05D006677 ORTHO05D008348 1.9e-33 148.7 87 78.2
CBR_g16835 Chara braunii HOM05D000019 ORTHO05D000048 8.4e-26 123.2 991 21.2
CAN.G26.36 Capsicum annuum HOM05D006677 ORTHO05D008348 6.7e-23 113.6 174 42.5
Os10g0560500 Oryza sativa ssp. japonica HOM05D006677 ORTHO05D008348 1.5e-22 112.5 199 41.2
DCAR_004972 Daucus carota HOM05D006677 ORTHO05D008348 2.0e-19 102.1 116 46.6
TPR.G36480 Trifolium pratense HOM05D004733 ORTHO05D008348 3.3e-14 84.7 46 82.6
MCO13G224 Micromonas commoda HOM05D006677 ORTHO05D008348 4.3e-14 84.3 855 20.9
CAN.G1178.24 Capsicum annuum HOM05D006677 ORTHO05D008348 7.4e-14 83.6 70 54.3
TAR629G1120 Trochodendron aralioides HOM05D006677 ORTHO05D008348 2.2e-13 82.0 91 49.5
ECA233G4789 Erigeron canadensis HOM05D006677 ORTHO05D008348 8.5e-10 70.1 50 66.0
ECA234G1619 Erigeron canadensis HOM05D000206 ORTHO05D000232 4.6e-08 64.3 49 59.2
Cre06.g278126 Chlamydomonas reinhardtii HOM05D006677 ORTHO05D008348 8.8e-07 60.1 107 35.5


User provided reference genes

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