Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G219800 Phaseolus vulgaris HOM05D006466 ORTHO05D008084 6.5e-104 380.9 222 100.0
VMungo0251G3296 Vigna mungo HOM05D006466 ORTHO05D008084 5.3e-82 308.1 224 86.2
Glyma.17G140900 Glycine max HOM05D006466 ORTHO05D008084 2.3e-56 223.0 236 66.5
TPR.G37616 Trifolium pratense HOM05D006466 ORTHO05D008084 5.4e-50 201.8 245 55.9
arahy.Tifrunner.gnm1.ann1.VT8LY8 Arachis hypogaea HOM05D006466 ORTHO05D008084 4.6e-49 198.7 243 59.7
Gohir.A12G217700 Gossypium hirsutum HOM05D006466 ORTHO05D008084 7.8e-49 198.0 229 56.8
Medtr4g101030 Medicago truncatula HOM05D006466 ORTHO05D008084 7.8e-49 198.0 238 51.7
Thecc.03G253200 Theobroma cacao HOM05D006466 ORTHO05D008084 1.7e-48 196.8 233 57.9
ClCG01G004000 Citrullus lanatus HOM05D006466 ORTHO05D008084 1.1e-47 194.1 208 55.8
Gorai.008G235900 Gossypium raimondii HOM05D006466 ORTHO05D008084 1.5e-47 193.7 230 56.1
Gohir.D12G220200 Gossypium hirsutum HOM05D006466 ORTHO05D008084 2.5e-47 193.0 230 56.1
QL12p012545 Quercus lobata HOM05D006466 ORTHO05D008084 3.3e-47 192.6 230 53.9
CsaV3_5G004180 Cucumis sativus L. HOM05D006466 ORTHO05D008084 9.5e-47 191.0 209 54.1
Haze_07889 Corylus avellana HOM05D006466 ORTHO05D008084 1.6e-46 190.3 227 57.7
MELO3C005537.2 Cucumis melo HOM05D006466 ORTHO05D008084 2.1e-46 189.9 208 54.3
arahy.Tifrunner.gnm1.ann1.HK6I2L Arachis hypogaea HOM05D006466 ORTHO05D008084 4.7e-46 188.7 243 53.9
Cfa012739 Carpinus fangiana HOM05D006466 ORTHO05D008084 4.7e-46 188.7 228 56.6
CiPaw.11G153200 Carya illinoinensis HOM05D006466 ORTHO05D008084 4.7e-46 188.7 229 56.8
Sed0012351 Sechium edule HOM05D006466 ORTHO05D008084 4.7e-46 188.7 210 54.8
Ciclev10005762m.g Citrus clementina HOM05D006466 ORTHO05D008084 6.2e-46 188.3 226 51.8
FvH4_5g18710 Fragaria vesca HOM05D006466 ORTHO05D008084 1.0e-45 187.6 233 54.1
FAN18G0606 Fragaria x ananassa HOM05D006466 ORTHO05D008084 1.4e-45 187.2 220 54.5
GSVIVG01001313001 Vitis vinifera HOM05D006466 ORTHO05D008084 1.4e-45 187.2 219 52.1
arahy.Tifrunner.gnm1.ann1.MY6G43 Arachis hypogaea HOM05D006466 ORTHO05D008084 2.3e-45 186.4 241 56.8
Eucgr.D02068 Eucalyptus grandis HOM05D006466 ORTHO05D008084 2.3e-45 186.4 220 53.6
Lj4g0024258 Lotus japonicus HOM05D006466 ORTHO05D008084 2.3e-45 186.4 222 55.0
Potri.001G123200 Populus trichocarpa HOM05D006466 ORTHO05D008084 3.1e-45 186.0 227 54.6
arahy.Tifrunner.gnm1.ann1.LISY29 Arachis hypogaea HOM05D006466 ORTHO05D008084 4.0e-45 185.7 252 53.2
Sabra01G0094900 Salix brachista HOM05D006466 ORTHO05D008084 4.0e-45 185.7 226 53.1
Sed0026776 Sechium edule HOM05D006466 ORTHO05D008084 4.0e-45 185.7 207 56.5
FAN04G2180 Fragaria x ananassa HOM05D006466 ORTHO05D008084 5.2e-45 185.3 220 52.7
TWI81G0148 Tripterygium wilfordii HOM05D006466 ORTHO05D008084 1.5e-44 183.7 233 51.5
PGR031G1557 Punica granatum HOM05D006466 ORTHO05D008084 1.3e-43 180.6 211 55.9
Actinidia27463 Actinidia chinensis HOM05D006466 ORTHO05D008084 2.9e-43 179.5 216 52.3
Cpa.g.sc29.144 Carica papaya HOM05D006466 ORTHO05D008084 2.9e-43 179.5 228 59.6
Hma1.2p1_2380F.1_g320960 Hydrangea macrophylla HOM05D006466 ORTHO05D008084 4.9e-43 178.7 243 47.7
Lalb_Chr16g0389331 Lupinus albus HOM05D006466 ORTHO05D008084 6.4e-43 178.3 235 52.8
Ah.12g056750 Amaranthus hybridus HOM05D006466 ORTHO05D008084 1.4e-42 177.2 235 47.2
Dinv39131 Davidia involucrata HOM05D006466 ORTHO05D008084 1.9e-42 176.8 216 56.0
CARHR222950 Cardamine hirsuta HOM05D006466 ORTHO05D008084 2.4e-42 176.4 256 49.6
Manes.15G178400 Manihot esculenta HOM05D006466 ORTHO05D008084 3.2e-42 176.0 225 50.7
RcHm_v2.0_Chr7g0203001 Rosa chinensis HOM05D006466 ORTHO05D008084 3.2e-42 176.0 217 52.1
Atru.chr2.1841 Acer truncatum HOM05D006466 ORTHO05D008084 4.1e-42 175.6 235 53.6
Ca_21959_v3 Cicer arietinum L. HOM05D006466 ORTHO05D008084 4.1e-42 175.6 224 57.6
PGSC0003DMG401004755 Solanum tuberosum HOM05D006466 ORTHO05D008084 4.1e-42 175.6 235 46.8
Aa31LG2G12660 Aethionema arabicum HOM05D006466 ORTHO05D008084 5.4e-42 175.3 245 50.2
Solyc08g078740.1 Solanum lycopersicum HOM05D006466 ORTHO05D008084 5.4e-42 175.3 233 47.2
Sopen08g027210 Solanum pennellii HOM05D006466 ORTHO05D008084 5.4e-42 175.3 233 47.2
Carub.0007s2494 Capsella rubella HOM05D006466 ORTHO05D008084 1.6e-41 173.7 254 50.0
Manes.01G079600 Manihot esculenta HOM05D006466 ORTHO05D008084 2.0e-41 173.3 217 53.9
Manes.15G178500 Manihot esculenta HOM05D006466 ORTHO05D008084 4.6e-41 172.2 226 50.0
AL7G38350 Arabidopsis lyrata HOM05D006466 ORTHO05D008084 6.0e-41 171.8 256 49.6
AL7G38400 Arabidopsis lyrata HOM05D006466 ORTHO05D008084 6.0e-41 171.8 256 49.6
MSTRG.12091 Avicennia marina HOM05D006466 ORTHO05D008084 7.8e-41 171.4 239 50.6
FAN13G1623 Fragaria x ananassa HOM05D006466 ORTHO05D008084 7.8e-41 171.4 220 50.9
Psat4g071640 Pisum sativum HOM05D006466 ORTHO05D008084 1.0e-40 171.0 241 49.4
Prupe.5G071300 Prunus persica HOM05D006466 ORTHO05D008084 2.3e-40 169.9 169 60.9
Lsat_1_v5_gn_3_521 Lactuca sativa HOM05D006466 ORTHO05D008084 3.0e-40 169.5 224 48.7
Sp7g15110 Schrenkiella parvula HOM05D006466 ORTHO05D008084 5.0e-40 168.7 257 47.9
Lj1A353T9 Lonicera japonica HOM05D006466 ORTHO05D008084 6.6e-40 168.3 208 51.0
CDE02G4728 Ceratophyllum demersum HOM05D006466 ORTHO05D008084 8.6e-40 167.9 213 47.9
PSO170G1975 Papaver somniferum HOM05D006466 ORTHO05D008084 4.3e-39 165.6 210 51.0
PSO528G0015 Papaver somniferum HOM05D006466 ORTHO05D008084 7.3e-39 164.9 227 49.8
CANSAT21G1921 Cannabis sativa HOM05D006466 ORTHO05D008084 1.2e-38 164.1 229 52.4
SHI10480 Sapria himalayana HOM05D006466 ORTHO05D008084 1.2e-38 164.1 225 47.6
BcaNung02868 Brassica carinata HOM05D006466 ORTHO05D008084 2.1e-38 163.3 253 46.6
Nn1g01036 Nelumbo nucifera HOM05D006466 ORTHO05D008084 2.1e-38 163.3 221 53.8
Nitab4.5_0000312g0170 Nicotiana tabacum HOM05D006466 ORTHO05D008084 2.8e-38 162.9 233 48.1
unitig_61.g26196 Utricularia gibba HOM05D006466 ORTHO05D008084 2.8e-38 162.9 239 45.6
Nitab4.5_0008481g0010 Nicotiana tabacum HOM05D006466 ORTHO05D008084 3.6e-38 162.5 238 47.1
FAN08G0853 Fragaria x ananassa HOM05D006466 ORTHO05D008084 6.2e-38 161.8 220 50.9
AT4G16535 Arabidopsis thaliana HOM05D006466 ORTHO05D008084 4.0e-37 159.1 257 49.4
Peaxi162Scf00002g00172 Petunia axillaris HOM05D006466 ORTHO05D008084 8.9e-37 157.9 253 45.1
TAR375G0032 Trochodendron aralioides HOM05D006466 ORTHO05D008084 8.9e-37 157.9 220 50.9
Thhalv10026056m.g Eutrema salsugineum HOM05D006466 ORTHO05D008084 2.0e-36 156.8 256 44.5
DCAR_008489 Daucus carota HOM05D005079 ORTHO05D006362 9.8e-36 154.5 218 47.7
SalBow6G4398 Salvia bowleyana HOM05D006466 ORTHO05D008084 1.3e-35 154.1 182 50.0
Nn6g33981 Nelumbo nucifera HOM05D006466 ORTHO05D008084 1.7e-35 153.7 161 57.1
ATR0193G040 Amborella trichopoda HOM05D006466 ORTHO05D008084 2.2e-35 153.3 171 52.6
HPP92_014482 Vanilla planifolia HOM05D006466 ORTHO05D008084 3.7e-35 152.5 247 44.5
Cc08_g12600 Coffea canephora HOM05D006466 ORTHO05D008084 4.9e-35 152.1 195 49.2
SGA_v2.0_scaffold120G32877 Striga asiatica HOM05D006466 ORTHO05D008084 8.3e-35 151.4 242 45.9
Rhsim07G0108000 Rhododendron simsii HOM05D006466 ORTHO05D008084 2.4e-34 149.8 158 55.1
ECA232G3467 Erigeron canadensis HOM05D006466 ORTHO05D008084 5.4e-34 148.7 217 44.2
BcaC06g33488 Brassica carinata HOM05D006466 ORTHO05D008084 2.7e-33 146.4 259 43.2
MD04G1088600 Malus domestica HOM05D006466 ORTHO05D008084 2.7e-33 146.4 239 47.3
A03p49940 Brassica napus HOM05D006466 ORTHO05D008084 3.5e-33 146.0 252 42.9
BraA03t14087Z Brassica rapa HOM05D006466 ORTHO05D008084 3.5e-33 146.0 252 42.9
C07p47980 Brassica napus HOM05D006466 ORTHO05D008084 6.0e-33 145.2 258 43.0
BolC7t45321H Brassica oleracea HOM05D006466 ORTHO05D008084 6.0e-33 145.2 258 43.0
Aqoxy6G01886 Aquilegia oxysepala HOM05D006466 ORTHO05D008084 3.9e-32 142.5 240 47.5
GSVIVG01030884001 Vitis vinifera HOM05D006466 ORTHO05D008084 5.1e-32 142.1 203 45.8
Migut.A00968 Erythranthe guttata HOM05D006466 ORTHO05D008084 1.5e-31 140.6 249 44.2
Os10g0507500 Oryza sativa ssp. japonica HOM05D006466 ORTHO05D008084 1.9e-31 140.2 251 43.8
Eucgr.D02058 Eucalyptus grandis HOM05D006466 ORTHO05D008084 5.6e-31 138.7 214 47.2
AUR62007505 Chenopodium quinoa HOM05D006466 ORTHO05D008084 4.0e-29 132.5 178 45.5
Lj8A452G56 Lonicera japonica HOM05D006466 ORTHO05D008084 5.8e-28 128.6 138 54.3
SEGI_30297 Sequoiadendron giganteum HOM05D006466 ORTHO05D008084 8.4e-27 124.8 226 40.3
AUR62039958 Chenopodium quinoa HOM05D006466 ORTHO05D008084 3.2e-26 122.9 225 40.0
CDE11G0010 Ceratophyllum demersum HOM05D006466 ORTHO05D008084 5.4e-26 122.1 187 44.9
AagrBONN_evm.TU.Sc2ySwM_228.639 Anthoceros agrestis HOM05D007188 ORTHO05D009102 1.0e-24 117.9 231 38.5
arahy.Tifrunner.gnm1.ann1.AC5BZW Arachis hypogaea HOM05D006466 ORTHO05D008084 2.3e-24 116.7 174 47.1
Oeu019590.1 Olea europaea HOM05D006466 ORTHO05D008084 3.0e-24 116.3 210 41.9
arahy.Tifrunner.gnm1.ann1.Y2DLV0 Arachis hypogaea HOM05D006466 ORTHO05D008084 7.3e-23 111.7 109 58.7
Mapoly0015s0012 Marchantia polymorpha HOM05D006466 ORTHO05D008084 5.4e-18 95.5 253 33.2
arahy.Tifrunner.gnm1.ann1.W2BU8F Arachis hypogaea HOM05D004339 ORTHO05D002389 2.3e-16 90.1 159 44.7
Pp3c3_19850 Physcomitrium patens HOM05D006466 ORTHO05D008084 5.1e-16 89.0 216 35.2
Zm00001eb044010 Zea mays HOM05D006466 ORTHO05D008084 2.4e-13 80.1 107 47.7
Sc22g0000810 Simmondsia chinensis HOM05D006466 ORTHO05D008084 4.0e-13 79.3 96 58.3
Oeu039628.1 Olea europaea HOM05D006466 ORTHO05D008084 1.7e-11 73.9 54 66.7
HanXRQChr02g0051581 Helianthus annuus HOM05D006466 ORTHO05D008084 1.9e-10 70.5 83 50.6
Eucgr.L01522 Eucalyptus grandis HOM05D006466 ORTHO05D008084 3.2e-10 69.7 51 64.7
Actinidia05202 Actinidia chinensis HOM05D006466 ORTHO05D008084 1.0e-08 64.7 83 51.8
CBR_g29445 Chara braunii HOM05D006466 ORTHO05D008084 2.5e-07 60.1 75 56.0
Cre06.g300200 Chlamydomonas reinhardtii HOM05D006466 ORTHO05D008084 2.5e-07 60.1 179 37.4
arahy.Tifrunner.gnm1.ann1.X9JZY0 Arachis hypogaea HOM05D004687 ORTHO05D006002 9.6e-07 58.2 80 47.5
MCO04G315 Micromonas commoda HOM05D006430 ORTHO05D007585 6.2e-06 55.5 34 76.5


User provided reference genes

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