Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G214325 Phaseolus vulgaris HOM05D005835 ORTHO05D007187 5.8e-89 330.9 169 100.0
VMungo1215G0693 Vigna mungo HOM05D005835 ORTHO05D007187 1.7e-80 302.8 169 89.9
Glyma.05G051800 Glycine max HOM05D005835 ORTHO05D007187 7.7e-73 277.3 169 84.0
Lalb_Chr05g0225471 Lupinus albus HOM05D005835 ORTHO05D007187 5.9e-65 251.1 177 73.4
arahy.Tifrunner.gnm1.ann1.7G3HX4 Arachis hypogaea HOM05D005835 ORTHO05D007187 2.1e-62 242.7 177 70.6
Ca_12275_v3 Cicer arietinum L. HOM05D005835 ORTHO05D007187 2.3e-61 239.2 169 72.8
Medtr4g102330 Medicago truncatula HOM05D005835 ORTHO05D007187 2.3e-61 239.2 169 73.4
Psat0s1988g0040 Pisum sativum HOM05D005835 ORTHO05D007187 1.1e-60 236.9 169 72.2
Lalb_Chr16g0389651 Lupinus albus HOM05D005835 ORTHO05D007187 1.7e-59 233.0 177 67.8
TPR.G37587 Trifolium pratense HOM05D005835 ORTHO05D007187 1.8e-58 229.6 169 71.0
arahy.Tifrunner.gnm1.ann1.4SJ6CH Arachis hypogaea HOM05D005835 ORTHO05D007187 1.6e-57 226.5 172 68.0
Hma1.2p1_2131F.1_g314730 Hydrangea macrophylla HOM05D005835 ORTHO05D007187 3.7e-43 178.7 171 56.1
DCAR_000844 Daucus carota HOM05D004805 ORTHO05D007187 6.3e-43 177.9 169 57.4
Nitab4.5_0005535g0030 Nicotiana tabacum HOM05D005835 ORTHO05D007187 1.1e-42 177.2 171 58.5
Dinv39089 Davidia involucrata HOM05D005835 ORTHO05D007187 2.4e-42 176.0 173 56.6
Dinv21579 Davidia involucrata HOM05D005835 ORTHO05D007187 7.0e-42 174.5 171 56.7
Nitab4.5_0005230g0060 Nicotiana tabacum HOM05D005835 ORTHO05D007187 9.1e-42 174.1 171 56.7
Haze_08597 Corylus avellana HOM05D005835 ORTHO05D007187 5.9e-41 171.4 171 53.8
MSTRG.12070 Avicennia marina HOM05D005835 ORTHO05D007187 7.7e-41 171.0 173 56.1
Prupe.4G260700 Prunus persica HOM05D005835 ORTHO05D007187 1.0e-40 170.6 170 52.9
Cpa.g.sc29.103 Carica papaya HOM05D005835 ORTHO05D007187 5.0e-40 168.3 174 50.0
Eucgr.E01477 Eucalyptus grandis HOM05D005835 ORTHO05D007187 6.6e-40 167.9 162 56.2
Oeu040228.1 Olea europaea HOM05D005835 ORTHO05D007187 6.6e-40 167.9 174 52.9
TAR374G0447 Trochodendron aralioides HOM05D005835 ORTHO05D007187 4.2e-39 165.2 176 54.5
SalBow6G1585 Salvia bowleyana HOM05D005835 ORTHO05D007187 7.2e-39 164.5 163 55.2
SGA_v2.0_scaffold146G36171 Striga asiatica HOM05D005835 ORTHO05D007187 3.6e-38 162.2 163 54.0
CiPaw.12G105500 Carya illinoinensis HOM05D005835 ORTHO05D007187 1.0e-37 160.6 169 51.5
Rhsim07G0102800 Rhododendron simsii HOM05D005835 ORTHO05D007187 1.0e-37 160.6 164 53.0
Atru.chr9.1404 Acer truncatum HOM05D005835 ORTHO05D007187 1.4e-37 160.2 174 50.6
CiPaw.11G149200 Carya illinoinensis HOM05D005835 ORTHO05D007187 1.8e-37 159.8 161 52.8
Nn1g01126 Nelumbo nucifera HOM05D005835 ORTHO05D007187 1.8e-37 159.8 170 52.9
Nn1g01130 Nelumbo nucifera HOM05D005835 ORTHO05D007187 1.8e-37 159.8 170 52.4
Sc02g0009280 Simmondsia chinensis HOM05D005835 ORTHO05D007187 1.8e-37 159.8 172 51.2
Duzib068G0435 Durio zibethinus HOM05D005835 ORTHO05D007187 2.3e-37 159.5 174 49.4
MBI04_g35668_MAGBIO Magnolia biondii HOM05D005835 ORTHO05D007187 4.0e-37 158.7 174 55.2
PGSC0003DMG400029987 Solanum tuberosum HOM05D005835 ORTHO05D007187 4.0e-37 158.7 167 52.7
SGA_v2.0_scaffold120G32837 Striga asiatica HOM05D005835 ORTHO05D007187 6.8e-37 157.9 166 55.4
CAN.G1528.1 Capsicum annuum HOM05D005835 ORTHO05D007187 8.9e-37 157.5 167 50.9
Migut.A00824 Erythranthe guttata HOM05D005835 ORTHO05D007187 1.2e-36 157.1 180 52.8
Solyc11g065270.2 Solanum lycopersicum HOM05D005835 ORTHO05D007187 1.2e-36 157.1 167 53.3
Sopen11g025020 Solanum pennellii HOM05D005835 ORTHO05D007187 1.5e-36 156.8 167 53.3
Cfa012808 Carpinus fangiana HOM05D005835 ORTHO05D007187 2.0e-36 156.4 178 48.3
Cc08_g13120 Coffea canephora HOM05D005835 ORTHO05D007187 2.0e-36 156.4 177 50.3
MELO3C013977.2 Cucumis melo HOM05D005835 ORTHO05D007187 2.0e-36 156.4 171 50.9
Aqoxy7G00679 Aquilegia oxysepala HOM05D005835 ORTHO05D007187 2.6e-36 156.0 172 53.5
FAN08G1980 Fragaria x ananassa HOM05D005835 ORTHO05D007187 2.6e-36 156.0 171 49.7
FAN13G2021 Fragaria x ananassa HOM05D005835 ORTHO05D007187 2.6e-36 156.0 171 49.1
MD04G1080500 Malus domestica HOM05D005835 ORTHO05D007187 2.6e-36 156.0 169 50.9
Manes.01G074300 Manihot esculenta HOM05D005835 ORTHO05D007187 2.6e-36 156.0 170 50.0
CANSAT21G1576 Cannabis sativa HOM05D005835 ORTHO05D007187 3.4e-36 155.6 173 52.6
QL03p017823 Quercus lobata HOM05D005835 ORTHO05D007187 3.4e-36 155.6 171 50.3
Sc16g0006190 Simmondsia chinensis HOM05D005835 ORTHO05D007187 3.4e-36 155.6 167 49.7
ClCG10G003070 Citrullus lanatus HOM05D005835 ORTHO05D007187 4.4e-36 155.2 171 51.5
Migut.A00868 Erythranthe guttata HOM05D005835 ORTHO05D007187 4.4e-36 155.2 180 52.2
TAR375G0176 Trochodendron aralioides HOM05D005835 ORTHO05D007187 4.4e-36 155.2 166 54.8
CsaV3_3G003110 Cucumis sativus L. HOM05D005835 ORTHO05D007187 9.8e-36 154.1 171 49.7
TWI81G0081 Tripterygium wilfordii HOM05D005835 ORTHO05D007187 9.8e-36 154.1 170 49.4
QL93p2009_0035 Quercus lobata HOM05D005835 ORTHO05D007187 2.2e-35 152.9 171 50.9
FvH4_5g00490 Fragaria vesca HOM05D005835 ORTHO05D007187 2.8e-35 152.5 171 48.0
FAN18G1180 Fragaria x ananassa HOM05D005835 ORTHO05D007187 2.8e-35 152.5 171 48.0
Sabra03G0079300 Salix brachista HOM05D005835 ORTHO05D007187 8.3e-35 151.0 170 47.1
Peaxi162Scf00004g03718 Petunia axillaris HOM05D005835 ORTHO05D007187 1.4e-34 150.2 163 52.1
ECA233G2089 Erigeron canadensis HOM05D005835 ORTHO05D007187 1.8e-34 149.8 168 50.0
Thecc.03G259800 Theobroma cacao HOM05D005835 ORTHO05D007187 3.1e-34 149.1 174 45.4
Potri.001G118700 Populus trichocarpa HOM05D005835 ORTHO05D007187 4.1e-34 148.7 170 47.1
FAN04G1493 Fragaria x ananassa HOM05D005835 ORTHO05D007187 5.4e-34 148.3 171 47.4
Potri.003G114200 Populus trichocarpa HOM05D005835 ORTHO05D007187 1.2e-33 147.1 170 45.9
PGR031G1343 Punica granatum HOM05D005835 ORTHO05D007187 2.0e-33 146.4 173 49.7
Duzib205G1381 Durio zibethinus HOM05D005835 ORTHO05D007187 2.7e-33 146.0 174 44.8
QL12p014300 Quercus lobata HOM05D005835 ORTHO05D007187 2.7e-33 146.0 169 47.9
Gohir.D03G159700 Gossypium hirsutum HOM05D005835 ORTHO05D007187 3.5e-33 145.6 174 46.0
RcHm_v2.0_Chr7g0202021 Rosa chinensis HOM05D005835 ORTHO05D007187 4.5e-33 145.2 171 46.2
Aa31LG9G10270 Aethionema arabicum HOM05D005835 ORTHO05D007187 1.3e-32 143.7 168 47.6
CDE02G0720 Ceratophyllum demersum HOM05D005835 ORTHO05D007187 2.3e-32 142.9 165 50.3
Duzib084G0572 Durio zibethinus HOM05D005835 ORTHO05D007187 2.9e-32 142.5 174 45.4
HanXRQChr13g0394681 Helianthus annuus HOM05D005835 ORTHO05D007187 3.9e-32 142.1 163 49.7
COL.COLO4_23892 Corchorus olitorius HOM05D005835 ORTHO05D007187 8.6e-32 141.0 184 45.1
CDE04G3390 Ceratophyllum demersum HOM05D005835 ORTHO05D007187 1.5e-31 140.2 171 49.7
Sabra01G0091600 Salix brachista HOM05D005835 ORTHO05D007187 1.5e-31 140.2 170 45.9
EL10Ac4g07900 Beta vulgaris HOM05D005835 ORTHO05D007187 1.9e-31 139.8 166 48.8
Gorai.003G168000 Gossypium raimondii HOM05D005835 ORTHO05D007187 1.9e-31 139.8 174 43.7
CARHR253910 Cardamine hirsuta HOM05D005835 ORTHO05D007187 2.5e-31 139.4 168 47.0
AUR62025857 Chenopodium quinoa HOM05D005835 ORTHO05D007187 7.3e-31 137.9 175 47.4
Hund02098 Selenicereus undatus HOM05D005835 ORTHO05D007187 7.3e-31 137.9 165 47.9
AT4G12340 Arabidopsis thaliana HOM05D005835 ORTHO05D007187 9.5e-31 137.5 163 46.0
AUR62029858 Chenopodium quinoa HOM05D005835 ORTHO05D007187 9.5e-31 137.5 175 46.9
AL6G47200 Arabidopsis lyrata HOM05D005835 ORTHO05D007187 1.6e-30 136.7 165 46.1
HanXRQChr02g0049681 Helianthus annuus HOM05D005835 ORTHO05D007187 1.6e-30 136.7 168 46.4
Sp6g05250 Schrenkiella parvula HOM05D005835 ORTHO05D007187 1.6e-30 136.7 166 45.8
Ah.01g013950 Amaranthus hybridus HOM05D005835 ORTHO05D007187 2.1e-30 136.3 166 48.8
Gohir.D12G222800 Gossypium hirsutum HOM05D005835 ORTHO05D007187 2.8e-30 136.0 176 44.3
Gorai.008G238900 Gossypium raimondii HOM05D005835 ORTHO05D007187 2.8e-30 136.0 176 44.3
Sed0018910 Sechium edule HOM05D005835 ORTHO05D007187 4.7e-30 135.2 171 45.0
Gohir.A03G013800 Gossypium hirsutum HOM05D005835 ORTHO05D007187 2.3e-29 132.9 174 42.0
BcaC03g16290 Brassica carinata HOM05D005835 ORTHO05D007187 3.1e-29 132.5 166 44.0
BolC2t10102H Brassica oleracea HOM05D005835 ORTHO05D007187 3.1e-29 132.5 166 44.0
C02p40850 Brassica napus HOM05D005835 ORTHO05D007187 4.0e-29 132.1 164 44.5
Carub.0006s3148 Capsella rubella HOM05D005835 ORTHO05D007187 5.2e-29 131.7 167 45.5
PSO782G1790 Papaver somniferum HOM05D005835 ORTHO05D007187 5.2e-29 131.7 173 49.1
Manes.02G034200 Manihot esculenta HOM05D005835 ORTHO05D007187 1.2e-28 130.6 170 47.6
A02p25690 Brassica napus HOM05D005835 ORTHO05D007187 1.5e-28 130.2 166 43.4
BraA02t07561Z Brassica rapa HOM05D005835 ORTHO05D007187 1.5e-28 130.2 166 44.0
Ciclev10022502m.g Citrus clementina HOM05D005835 ORTHO05D007187 1.5e-28 130.2 170 45.3
THA.LOC104813805 Tarenaya hassleriana HOM05D005835 ORTHO05D007187 1.5e-28 130.2 163 45.4
GSVIVG01004287001 Vitis vinifera HOM05D005835 ORTHO05D007187 2.0e-28 129.8 163 49.1
GSVIVG01007420001 Vitis vinifera HOM05D005835 ORTHO05D007187 2.0e-28 129.8 163 49.1
PSO478G0096 Papaver somniferum HOM05D005835 ORTHO05D007187 2.6e-28 129.4 174 48.3
Gohir.A12G220500 Gossypium hirsutum HOM05D005835 ORTHO05D007187 4.4e-28 128.6 177 44.1
Os05g0103500 Oryza sativa ssp. japonica HOM05D005835 ORTHO05D007187 7.5e-28 127.9 169 47.3
HPP92_005292 Vanilla planifolia HOM05D005835 ORTHO05D007187 7.5e-28 127.9 171 42.7
CSS0045584 Camellia sinensis var. sinensis HOM05D005835 ORTHO05D007187 3.7e-27 125.6 152 46.7
CSS0008349 Camellia sinensis var. sinensis HOM05D005835 ORTHO05D007187 1.9e-26 123.2 163 45.4
TWI15G0429 Tripterygium wilfordii HOM05D005835 ORTHO05D007187 1.9e-26 123.2 107 55.1
THA.LOC104806344 Tarenaya hassleriana HOM05D005835 ORTHO05D007187 3.2e-26 122.5 170 45.3
Zm00001eb356210 Zea mays HOM05D005835 ORTHO05D007187 7.0e-26 121.3 169 45.6
BcaB05g23754 Brassica carinata HOM05D005835 ORTHO05D007187 1.2e-25 120.6 166 42.2
Lsat_1_v5_gn_6_4381 Lactuca sativa HOM05D005835 ORTHO05D007187 1.6e-25 120.2 158 48.1
Thhalv10029018m.g Eutrema salsugineum HOM05D005835 ORTHO05D007187 3.5e-25 119.0 166 42.8
BcaB01g01732 Brassica carinata HOM05D005835 ORTHO05D007187 4.6e-25 118.6 166 40.4
CARHR253930 Cardamine hirsuta HOM05D005835 ORTHO05D007187 7.8e-25 117.9 110 54.5
BcaC04g21221 Brassica carinata HOM05D005835 ORTHO05D007187 3.9e-24 115.5 166 40.4
C09p34190 Brassica napus HOM05D005835 ORTHO05D007187 3.9e-24 115.5 166 40.4
BolC9t56264H Brassica oleracea HOM05D005835 ORTHO05D007187 3.9e-24 115.5 166 40.4
SHI20590 Sapria himalayana HOM05D005835 ORTHO05D007187 8.6e-24 114.4 171 43.3
ATR0115G012 Amborella trichopoda HOM05D005835 ORTHO05D007187 1.1e-23 114.0 169 42.6
A09p26960 Brassica napus HOM05D005835 ORTHO05D007187 3.3e-23 112.5 168 39.9
BraA09t38266Z Brassica rapa HOM05D005835 ORTHO05D007187 3.3e-23 112.5 168 39.9
SEGI_03973 Sequoiadendron giganteum HOM05D005835 ORTHO05D007187 9.2e-18 94.4 180 36.1
Actinidia05173 Actinidia chinensis HOM05D005835 ORTHO05D000538 7.8e-17 91.3 114 49.1
Mapoly0001s0295 Marchantia polymorpha HOM05D005835 ORTHO05D007187 4.0e-13 79.0 177 32.2
CBR_g50926 Chara braunii HOM05D005835 ORTHO05D007187 2.7e-09 66.2 112 36.6
Pp3c15_5650 Physcomitrium patens HOM05D005835 ORTHO05D007187 4.6e-09 65.5 172 31.4
Pp3c8_11610 Physcomitrium patens HOM05D005835 ORTHO05D007187 1.6e-06 57.0 170 26.5


User provided reference genes

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