Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G211300 Phaseolus vulgaris HOM05D006563 ORTHO05D008154 1.4e-122 443.0 219 100.0
Ca_26101_v3 Cicer arietinum L. HOM05D006563 ORTHO05D008154 2.8e-107 392.1 220 87.3
Lj4g0002806 Lotus japonicus HOM05D006563 ORTHO05D008154 6.8e-106 387.5 223 86.1
Psat4g066200 Pisum sativum HOM05D006563 ORTHO05D008154 2.2e-104 382.5 220 85.0
Medtr4g103300 Medicago truncatula HOM05D006563 ORTHO05D008154 9.2e-103 377.1 233 81.5
Glyma.05G048400 Glycine max HOM05D006563 ORTHO05D008154 6.0e-102 374.4 201 91.5
Ciclev10032657m.g Citrus clementina HOM05D006563 ORTHO05D008154 1.6e-99 366.3 230 80.4
FAN04G0682 Fragaria x ananassa HOM05D006563 ORTHO05D008154 1.6e-99 366.3 224 82.1
FAN18G2834 Fragaria x ananassa HOM05D006563 ORTHO05D008154 4.7e-99 364.8 224 81.7
FvH4_5g08340 Fragaria vesca HOM05D006563 ORTHO05D008154 2.3e-98 362.5 224 81.2
TAR374G0821 Trochodendron aralioides HOM05D006563 ORTHO05D008154 2.3e-98 362.5 223 81.6
Dinv23146 Davidia involucrata HOM05D006563 ORTHO05D008154 4.0e-98 361.7 223 80.7
FAN04G3009 Fragaria x ananassa HOM05D006563 ORTHO05D008154 4.0e-98 361.7 224 81.2
FAN13G1867 Fragaria x ananassa HOM05D006563 ORTHO05D008154 4.0e-98 361.7 224 81.2
Manes.06G119700 Manihot esculenta HOM05D006563 ORTHO05D008154 4.0e-98 361.7 226 80.1
RcHm_v2.0_Chr7g0190121 Rosa chinensis HOM05D006563 ORTHO05D008154 6.8e-98 360.9 224 80.8
Prupe.5G150900 Prunus persica HOM05D006563 ORTHO05D008154 1.2e-97 360.1 224 80.4
MD14G1156900 Malus domestica HOM05D006563 ORTHO05D008154 2.6e-97 359.0 224 79.9
Nitab4.5_0003282g0060 Nicotiana tabacum HOM05D006563 ORTHO05D008154 5.8e-97 357.8 220 79.1
GSVIVG01008544001 Vitis vinifera HOM05D006563 ORTHO05D008154 5.8e-97 357.8 228 77.6
Atru.chr6.1794 Acer truncatum HOM05D006563 ORTHO05D008154 2.9e-96 355.5 224 79.9
Potri.015G096400 Populus trichocarpa HOM05D006563 ORTHO05D008154 2.9e-96 355.5 228 79.4
TWI39G0919 Tripterygium wilfordii HOM05D006563 ORTHO05D008154 2.9e-96 355.5 219 79.5
Thecc.03G129300 Theobroma cacao HOM05D006563 ORTHO05D008154 4.9e-96 354.8 224 79.9
Cpa.g.sc13.115 Carica papaya HOM05D006563 ORTHO05D008154 9.2e-95 350.5 225 76.9
Sc04g0000640 Simmondsia chinensis HOM05D006563 ORTHO05D008154 9.2e-95 350.5 223 77.6
Nitab4.5_0004750g0020 Nicotiana tabacum HOM05D006563 ORTHO05D008154 1.6e-94 349.7 226 76.1
COL.COLO4_28130 Corchorus olitorius HOM05D006563 ORTHO05D008154 2.7e-94 349.0 224 79.5
Gorai.008G206400 Gossypium raimondii HOM05D006563 ORTHO05D008154 4.6e-94 348.2 224 78.1
MELO3C002362.2 Cucumis melo HOM05D006563 ORTHO05D008154 6.0e-94 347.8 223 76.2
Solyc03g111350.3 Solanum lycopersicum HOM05D006563 ORTHO05D008154 7.8e-94 347.4 225 76.0
ClCG03G003770 Citrullus lanatus HOM05D006563 ORTHO05D008154 1.0e-93 347.1 223 76.2
PGSC0003DMG400015182 Solanum tuberosum HOM05D006563 ORTHO05D008154 1.0e-93 347.1 225 75.6
Aa31LG4G17160 Aethionema arabicum HOM05D006563 ORTHO05D008154 1.3e-93 346.7 229 73.8
Gohir.D12G192100 Gossypium hirsutum HOM05D006563 ORTHO05D008154 1.3e-93 346.7 224 77.7
Duzib205G1898 Durio zibethinus HOM05D006563 ORTHO05D008154 1.7e-93 346.3 224 77.2
CAN.G352.13 Capsicum annuum HOM05D006563 ORTHO05D008154 2.3e-93 345.9 225 75.6
Oeu036009.4 Olea europaea HOM05D006563 ORTHO05D008154 3.0e-93 345.5 222 76.6
Peaxi162Scf00089g00627 Petunia axillaris HOM05D006563 ORTHO05D008154 3.0e-93 345.5 225 76.0
Actinidia08872 Actinidia chinensis HOM05D006563 ORTHO05D008154 3.9e-93 345.1 217 77.0
CANSAT80G0303 Cannabis sativa HOM05D006563 ORTHO05D008154 3.9e-93 345.1 226 76.1
Carub.0005s1473 Capsella rubella HOM05D006563 ORTHO05D008154 3.9e-93 345.1 223 75.8
Sopen03g030480 Solanum pennellii HOM05D006563 ORTHO05D008154 5.1e-93 344.7 225 76.4
Gohir.A12G189700 Gossypium hirsutum HOM05D006563 ORTHO05D008154 6.6e-93 344.4 224 77.2
CsaV3_1G009660 Cucumis sativus L. HOM05D006563 ORTHO05D008154 1.1e-92 343.6 223 75.3
QL10p002894 Quercus lobata HOM05D006563 ORTHO05D008154 1.1e-92 343.6 247 72.5
AL5G27990 Arabidopsis lyrata HOM05D006563 ORTHO05D008154 1.5e-92 343.2 225 74.7
Hma1.2p1_0426F.1_g150610 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 1.5e-92 343.2 222 78.8
SGA_v2.0_scaffold7G04149 Striga asiatica HOM05D006563 ORTHO05D008154 1.5e-92 343.2 221 76.5
AT3G48540 Arabidopsis thaliana HOM05D006563 ORTHO05D008154 1.9e-92 342.8 225 75.1
Thhalv10010696m.g Eutrema salsugineum HOM05D006563 ORTHO05D008154 4.3e-92 341.7 225 72.9
CSS0042372 Camellia sinensis var. sinensis HOM05D006563 ORTHO05D008154 5.6e-92 341.3 217 76.0
Hund02442 Selenicereus undatus HOM05D006563 ORTHO05D008154 9.6e-92 340.5 224 74.6
CARHR157340 Cardamine hirsuta HOM05D006563 ORTHO05D008154 2.1e-91 339.3 224 74.6
Migut.D01965 Erythranthe guttata HOM05D006563 ORTHO05D008154 2.1e-91 339.3 222 76.1
SalBow6G4201 Salvia bowleyana HOM05D006563 ORTHO05D008154 2.1e-91 339.3 221 74.2
SalBow6G4357 Salvia bowleyana HOM05D006563 ORTHO05D008154 2.1e-91 339.3 221 74.2
BcaC09g49875 Brassica carinata HOM05D006563 ORTHO05D008154 6.2e-91 337.8 221 73.8
A01p25680 Brassica napus HOM05D006563 ORTHO05D008154 6.2e-91 337.8 221 73.8
C01p32250 Brassica napus HOM05D006563 ORTHO05D008154 6.2e-91 337.8 221 73.8
BraA01t02447Z Brassica rapa HOM05D006563 ORTHO05D008154 6.2e-91 337.8 221 73.8
Sp5g13440 Schrenkiella parvula HOM05D006563 ORTHO05D008154 6.2e-91 337.8 221 73.8
Sed0017169 Sechium edule HOM05D006563 ORTHO05D008154 1.1e-90 337.0 226 74.8
BcaB05g23009 Brassica carinata HOM05D006563 ORTHO05D008154 1.4e-90 336.7 221 74.2
arahy.Tifrunner.gnm1.ann1.76974R Arachis hypogaea HOM05D006563 ORTHO05D008154 2.4e-90 335.9 233 76.4
arahy.Tifrunner.gnm1.ann1.G9M8TR Arachis hypogaea HOM05D006563 ORTHO05D008154 5.2e-90 334.7 218 78.0
Sabra15G0117200 Salix brachista HOM05D006563 ORTHO05D008154 6.8e-90 334.3 219 77.2
BolC1t03129H Brassica oleracea HOM05D006563 ORTHO05D008154 8.9e-90 334.0 221 72.9
HanXRQChr13g0408701 Helianthus annuus HOM05D006563 ORTHO05D008154 8.9e-90 334.0 225 74.7
MBI07_g16949_MAGBIO Magnolia biondii HOM05D006563 ORTHO05D008154 1.5e-89 333.2 217 74.7
Nn4g22315 Nelumbo nucifera HOM05D006563 ORTHO05D008154 1.5e-89 333.2 209 79.9
Oeu040847.2 Olea europaea HOM05D006563 ORTHO05D008154 2.6e-89 332.4 257 66.9
Aqoxy5G03376 Aquilegia oxysepala HOM05D006563 ORTHO05D008154 5.8e-89 331.3 233 71.2
ATR0561G278 Amborella trichopoda HOM05D006563 ORTHO05D008154 9.9e-89 330.5 212 75.9
MSTRG.9682 Avicennia marina HOM05D006563 ORTHO05D008154 1.3e-88 330.1 221 73.8
HPP92_025255 Vanilla planifolia HOM05D006563 ORTHO05D008154 1.7e-88 329.7 224 73.7
Eucgr.B00111 Eucalyptus grandis HOM05D006563 ORTHO05D008154 2.2e-88 329.3 236 71.2
FAN08G2924 Fragaria x ananassa HOM05D006563 ORTHO05D008154 2.9e-88 328.9 245 70.2
AUR62029612 Chenopodium quinoa HOM05D006563 ORTHO05D008154 1.4e-87 326.6 206 76.7
Cc09_g04000 Coffea canephora HOM05D006563 ORTHO05D008154 5.4e-87 324.7 244 67.2
Rhsim12G0174600 Rhododendron simsii HOM05D006563 ORTHO05D008154 5.4e-87 324.7 232 72.8
Lsat_1_v5_gn_1_28920 Lactuca sativa HOM05D006563 ORTHO05D008154 7.1e-87 324.3 223 71.7
VMungo1215G3263 Vigna mungo HOM05D006563 ORTHO05D008154 7.1e-87 324.3 168 94.0
PSO017G5417 Papaver somniferum HOM05D006563 ORTHO05D008154 9.3e-87 323.9 227 70.9
EL10Ac5g11412 Beta vulgaris HOM05D006563 ORTHO05D008154 2.1e-86 322.8 210 75.2
Os01g0765000 Oryza sativa ssp. japonica HOM05D006563 ORTHO05D008154 1.7e-85 319.7 231 68.8
AUR62034825 Chenopodium quinoa HOM05D006563 ORTHO05D008154 2.5e-84 315.8 207 75.4
CiPaw.11G007100 Carya illinoinensis HOM05D006563 ORTHO05D008154 5.6e-84 314.7 223 72.2
CDE05G1358 Ceratophyllum demersum HOM05D006563 ORTHO05D008154 1.6e-83 313.2 207 73.9
unitig_46.g18474 Utricularia gibba HOM05D006563 ORTHO05D008154 1.8e-82 309.7 222 69.4
PSO478G0702 Papaver somniferum HOM05D006563 ORTHO05D008154 4.5e-81 305.1 211 72.0
Medtr4g057655 Medicago truncatula HOM05D006563 ORTHO05D008154 1.1e-79 300.4 227 70.0
TPR.G19207 Trifolium pratense HOM05D006563 ORTHO05D008154 4.2e-79 298.5 154 92.9
PGR044G0473 Punica granatum HOM05D006563 ORTHO05D008154 3.5e-78 295.4 224 67.9
SEGI_38890 Sequoiadendron giganteum HOM05D006563 ORTHO05D008154 3.0e-77 292.4 239 62.8
Potri.012G097800 Populus trichocarpa HOM05D006563 ORTHO05D008154 1.1e-76 290.4 226 67.7
Haze_07139 Corylus avellana HOM05D006563 ORTHO05D008154 9.0e-74 280.8 207 71.0
Medtr4g071665 Medicago truncatula HOM05D006563 ORTHO05D008154 4.5e-73 278.5 227 65.6
Pp3c2_32260 Physcomitrium patens HOM05D006563 ORTHO05D008154 2.4e-71 272.7 184 67.9
AagrBONN_evm.TU.Sc2ySwM_228.2386 Anthoceros agrestis HOM05D006563 ORTHO05D008154 7.9e-70 267.7 188 67.6
Sc04g0000170 Simmondsia chinensis HOM05D006563 ORTHO05D008154 1.3e-67 260.4 206 68.0
DCAR_016389 Daucus carota HOM05D006563 ORTHO05D008154 2.1e-67 259.6 230 59.1
SMO116G0330 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 1.1e-63 247.3 147 78.2
Lalb_Chr13g0297241 Lupinus albus HOM05D006563 ORTHO05D008154 1.2e-62 243.8 152 80.9
vmacro16718 Vaccinium macrocarpon HOM05D006563 ORTHO05D008154 4.6e-62 241.9 328 46.6
Zm00001eb370270 Zea mays HOM05D006563 ORTHO05D008154 6.0e-62 241.5 226 57.5
Lj5A96G46 Lonicera japonica HOM05D006563 ORTHO05D008154 7.4e-60 234.6 145 82.8
Ah.11g044830 Amaranthus hybridus HOM05D006563 ORTHO05D008154 2.8e-59 232.6 149 74.5
Cc09_g03990 Coffea canephora HOM05D006563 ORTHO05D008154 4.1e-58 228.8 123 84.6
PRCOL_00002657 Prasinoderma coloniale HOM05D006563 ORTHO05D008154 2.6e-57 226.1 162 62.3
MCO04G397 Micromonas commoda HOM05D006563 ORTHO05D008154 3.3e-52 209.1 143 63.6
Cre19.g750897 Chlamydomonas reinhardtii HOM05D006563 ORTHO05D008154 3.3e-44 182.6 178 52.2
CBR_g19095 Chara braunii HOM05D006563 ORTHO05D008154 7.7e-41 171.4 134 62.7
Haze_26466 Corylus avellana HOM05D006563 ORTHO05D008154 6.1e-38 161.8 166 47.6
AL1G65740 Arabidopsis lyrata HOM05D006563 ORTHO05D008154 4.0e-29 132.5 63 93.7
SMO199G0092 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 1.6e-25 120.6 86 65.1
SMO361G0344 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 2.7e-25 119.8 63 82.5
Hma1.2p1_0426F.1_g150620 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 2.2e-24 116.7 68 88.2
MD06G1141700 Malus domestica HOM05D006563 ORTHO05D008154 4.7e-22 109.0 143 45.5
SEGI_22016 Sequoiadendron giganteum HOM05D006563 ORTHO05D008154 1.7e-19 100.5 118 48.3
Hma1.2p1_0426F.1_g150600 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 1.1e-18 97.8 89 59.6
Lalb_Chr14g0365481 Lupinus albus HOM05D006563 ORTHO05D239264 5.6e-07 58.9 39 71.8


User provided reference genes

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