Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G206500 Phaseolus vulgaris HOM05D007296 ORTHO05D009201 8.8e-60 233.4 117 100.0
Glyma.05G042900 Glycine max HOM05D007296 ORTHO05D009201 2.4e-41 172.2 124 75.0
VMungo1215G1852 Vigna mungo HOM05D007296 ORTHO05D009201 3.1e-41 171.8 122 76.2
Ca_30679_v3 Cicer arietinum L. HOM05D007296 ORTHO05D009201 8.3e-34 147.1 111 65.8
Lj4g0005296 Lotus japonicus HOM05D007296 ORTHO05D009201 1.6e-32 142.9 127 60.6
Lalb_Chr07g0183081 Lupinus albus HOM05D007296 ORTHO05D009201 6.1e-29 131.0 111 63.1
Thecc.03G117800 Theobroma cacao HOM05D007296 ORTHO05D009201 4.6e-24 114.8 118 52.5
Prupe.5G162900 Prunus persica HOM05D007296 ORTHO05D009201 4.3e-22 108.2 114 48.2
QL10p006090 Quercus lobata HOM05D007296 ORTHO05D009201 7.3e-22 107.5 114 49.1
COL.COLO4_30221 Corchorus olitorius HOM05D007296 ORTHO05D009201 5.2e-20 101.3 125 48.0
Gohir.D07G059700 Gossypium hirsutum HOM05D007296 ORTHO05D009201 6.8e-20 100.9 113 51.3
Gorai.001G063200 Gossypium raimondii HOM05D007296 ORTHO05D009201 6.8e-20 100.9 113 51.3
Gohir.A07G055400 Gossypium hirsutum HOM05D007296 ORTHO05D009201 1.5e-19 99.8 113 50.4
Ciclev10022926m.g Citrus clementina HOM05D007296 ORTHO05D009201 2.0e-19 99.4 116 47.4
CiPaw.11G015200 Carya illinoinensis HOM05D007296 ORTHO05D009201 3.2e-17 92.0 111 47.7
Nn3g16657 Nelumbo nucifera HOM05D007296 ORTHO05D009201 7.0e-17 90.9 116 41.4
Sabra15G0109100 Salix brachista HOM05D000631 ORTHO05D000524 7.0e-17 90.9 117 41.9
TAR371G0818 Trochodendron aralioides HOM05D007296 ORTHO05D009201 2.1e-16 89.4 120 41.7
Nn4g22550 Nelumbo nucifera HOM05D007296 ORTHO05D009201 3.5e-16 88.6 115 42.6
PSO017G3033 Papaver somniferum HOM05D007296 ORTHO05D009201 3.5e-16 88.6 114 42.1
Manes.14G057736 Manihot esculenta HOM05D007296 ORTHO05D009201 3.0e-15 85.5 101 45.5
Glyma.19G078800 Glycine max HOM05D007296 ORTHO05D009201 2.5e-14 82.4 100 43.0
Haze_14767 Corylus avellana HOM05D007296 ORTHO05D009201 3.6e-13 78.6 120 42.5
Glyma.16G068200 Glycine max HOM05D007296 ORTHO05D009201 8.1e-13 77.4 100 40.0
ATR0199G042 Amborella trichopoda HOM05D007296 ORTHO05D009201 1.1e-12 77.0 118 38.1
CSS0008661 Camellia sinensis var. sinensis HOM05D007296 ORTHO05D009201 2.3e-12 75.9 117 37.6
Potri.001G342100 Populus trichocarpa HOM05D007296 ORTHO05D009201 2.3e-12 75.9 111 41.4
QL10p006100 Quercus lobata HOM05D007296 ORTHO05D009201 2.3e-12 75.9 82 50.0
Cfa007330 Carpinus fangiana HOM05D007296 ORTHO05D009201 6.8e-12 74.3 120 39.2
MBI10_g42976_MAGBIO Magnolia biondii HOM05D007296 ORTHO05D009201 1.2e-11 73.6 105 36.2
CiPaw.03G046500 Carya illinoinensis HOM05D007296 ORTHO05D009201 2.0e-11 72.8 111 40.5
TPR.G1088 Trifolium pratense HOM05D007296 ORTHO05D009201 3.4e-11 72.0 112 38.4
TAR374G0807 Trochodendron aralioides HOM05D007296 ORTHO05D009201 3.4e-11 72.0 102 40.2
Psat3g172000 Pisum sativum HOM05D007296 ORTHO05D009201 7.5e-11 70.9 104 35.6
Medtr7g033080 Medicago truncatula HOM05D007296 ORTHO05D009201 1.7e-10 69.7 95 41.1
Lalb_Chr22g0360681 Lupinus albus HOM05D007296 ORTHO05D009201 2.9e-10 68.9 99 39.4
Duzib187G0331 Durio zibethinus HOM05D007296 ORTHO05D009201 3.7e-10 68.6 109 35.8
QL02p073829 Quercus lobata HOM05D007296 ORTHO05D009201 1.1e-09 67.0 112 37.5
Aqoxy3G01286 Aquilegia oxysepala HOM05D007296 ORTHO05D009201 1.4e-09 66.6 125 32.0
ClCG09G019420 Citrullus lanatus HOM05D007296 ORTHO05D009201 1.4e-09 66.6 127 33.1
Lj1g0014101 Lotus japonicus HOM05D007296 ORTHO05D009201 1.4e-09 66.6 100 40.0
Aqoxy5G03689 Aquilegia oxysepala HOM05D007296 ORTHO05D009201 4.1e-09 65.1 98 39.8
Thecc.04G021100 Theobroma cacao HOM05D007296 ORTHO05D009201 4.1e-09 65.1 109 38.5
CiPaw.04G030100 Carya illinoinensis HOM05D007296 ORTHO05D009201 7.1e-09 64.3 101 42.6
Gohir.A09G030400 Gossypium hirsutum HOM05D007296 ORTHO05D009201 9.2e-09 63.9 126 36.5
Phvul.008G151600 Phaseolus vulgaris HOM05D007296 ORTHO05D009201 9.2e-09 63.9 90 35.6
Dinv33417 Davidia involucrata HOM05D007296 ORTHO05D009201 1.2e-08 63.5 106 38.7
Hma1.2p1_0818F.1_g223340 Hydrangea macrophylla HOM05D007296 ORTHO05D009201 1.2e-08 63.5 104 39.4
Manes.15G152600 Manihot esculenta HOM05D007296 ORTHO05D009201 1.2e-08 63.5 101 37.6
Aqoxy7G03797 Aquilegia oxysepala HOM05D007296 ORTHO05D009201 2.1e-08 62.8 99 39.4
Gohir.D09G030000 Gossypium hirsutum HOM05D007296 ORTHO05D009201 2.7e-08 62.4 126 35.7
DCAR_021738 Daucus carota HOM05D000631 ORTHO05D000524 3.5e-08 62.0 104 37.5
VMungo1383G0878 Vigna mungo HOM05D007296 ORTHO05D009201 3.5e-08 62.0 96 37.5
MELO3C021597.2 Cucumis melo HOM05D007296 ORTHO05D009201 1.7e-07 59.7 127 29.1
Ciclev10017118m.g Citrus clementina HOM05D007296 ORTHO05D009201 2.3e-07 59.3 137 35.8
Cc02_g32290 Coffea canephora HOM05D007296 ORTHO05D009201 2.3e-07 59.3 118 34.7
Eucgr.I01721 Eucalyptus grandis HOM05D007296 ORTHO05D009201 3.9e-07 58.5 113 37.2
SGA_v2.0_scaffold18G08254 Striga asiatica HOM05D007296 ORTHO05D009201 3.9e-07 58.5 94 38.3
CAN.G473.34 Capsicum annuum HOM05D007296 ORTHO05D009201 8.6e-07 57.4 106 36.8
CsaV3_5G026960 Cucumis sativus L. HOM05D007296 ORTHO05D009201 1.5e-06 56.6 122 29.5
PGR142G0831 Punica granatum HOM05D007296 ORTHO05D009201 1.5e-06 56.6 75 42.7
Atru.chr6.2441 Acer truncatum HOM05D007296 ORTHO05D009201 3.3e-06 55.5 110 34.5
Sc16g0004380 Simmondsia chinensis HOM05D007296 ORTHO05D009201 3.3e-06 55.5 101 34.7


User provided reference genes

Program Settings