Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G192200 Phaseolus vulgaris HOM05D002504 ORTHO05D007555 2.5e-223 778.5 399 100.0
VMungo1215G2696 Vigna mungo HOM05D002504 ORTHO05D007555 4.3e-191 671.4 394 85.8
Glyma.17G097600 Glycine max HOM05D002504 ORTHO05D007555 1.4e-170 603.2 396 78.5
Lj4g0008726 Lotus japonicus HOM05D002504 ORTHO05D007555 1.4e-160 570.1 391 73.1
TPR.G5442 Trifolium pratense HOM05D002504 ORTHO05D007555 1.8e-157 559.7 392 71.7
Medtr3g078030 Medicago truncatula HOM05D002504 ORTHO05D007555 7.2e-154 547.7 391 70.3
Psat5g114360 Pisum sativum HOM05D002504 ORTHO05D007555 6.1e-153 544.7 391 70.1
Glyma.05G029300 Glycine max HOM05D002504 ORTHO05D007555 1.0e-152 543.9 398 71.9
Lalb_Chr12g0196751 Lupinus albus HOM05D002504 ORTHO05D007555 8.8e-152 540.8 391 68.5
TPR.G1695 Trifolium pratense HOM05D002504 ORTHO05D007555 2.6e-151 539.3 392 69.4
arahy.Tifrunner.gnm1.ann1.WQI89G Arachis hypogaea HOM05D002504 ORTHO05D007555 3.1e-149 532.3 391 67.3
arahy.Tifrunner.gnm1.ann1.A4B6B0 Arachis hypogaea HOM05D002504 ORTHO05D007555 5.9e-148 528.1 392 65.8
arahy.Tifrunner.gnm1.ann1.AAW7H5 Arachis hypogaea HOM05D002504 ORTHO05D007555 5.9e-148 528.1 391 66.5
Ca_16191_v3 Cicer arietinum L. HOM05D002504 ORTHO05D007555 1.7e-147 526.6 392 67.1
arahy.Tifrunner.gnm1.ann1.XHUI7I Arachis hypogaea HOM05D002504 ORTHO05D007555 2.9e-147 525.8 391 66.5
Haze_07368 Corylus avellana HOM05D002504 ORTHO05D007555 3.8e-131 472.2 391 59.8
QL10p015753 Quercus lobata HOM05D002504 ORTHO05D007555 3.8e-131 472.2 391 60.6
Cfa018981 Carpinus fangiana HOM05D002504 ORTHO05D007555 4.2e-130 468.8 391 59.3
Duzib068G0930 Durio zibethinus HOM05D002504 ORTHO05D007555 1.8e-128 463.4 392 57.7
QL10p005074 Quercus lobata HOM05D002504 ORTHO05D007555 8.8e-128 461.1 391 58.6
COL.COLO4_05456 Corchorus olitorius HOM05D002504 ORTHO05D007555 1.5e-127 460.3 392 58.2
RcHm_v2.0_Chr7g0180701 Rosa chinensis HOM05D002504 ORTHO05D007555 4.4e-127 458.8 389 56.6
CiPaw.11G039400 Carya illinoinensis HOM05D002504 ORTHO05D007555 5.7e-127 458.4 376 61.4
FvH4_5g15370 Fragaria vesca HOM05D002504 ORTHO05D007555 1.3e-126 457.2 390 56.9
FAN13G2799 Fragaria x ananassa HOM05D002504 ORTHO05D007555 1.1e-125 454.1 390 56.9
FAN04G1481 Fragaria x ananassa HOM05D002504 ORTHO05D007555 1.8e-125 453.4 390 56.7
FAN08G0998 Fragaria x ananassa HOM05D002504 ORTHO05D007555 3.1e-125 452.6 390 56.7
FAN18G2091 Fragaria x ananassa HOM05D002504 ORTHO05D007555 5.4e-125 451.8 390 56.4
Ciclev10020527m.g Citrus clementina HOM05D002504 ORTHO05D007555 1.6e-124 450.3 387 58.7
Prupe.5G187600 Prunus persica HOM05D002504 ORTHO05D007555 1.6e-124 450.3 389 56.8
Thecc.03G080700 Theobroma cacao HOM05D002504 ORTHO05D007555 2.0e-124 449.9 393 56.7
Gohir.A11G029531 Gossypium hirsutum HOM05D002504 ORTHO05D007555 1.9e-122 443.4 392 55.9
TWI38G0829 Tripterygium wilfordii HOM05D002504 ORTHO05D007555 1.9e-122 443.4 393 55.0
Dinv19925 Davidia involucrata HOM05D002504 ORTHO05D007332 7.2e-122 441.4 389 55.8
Cpa.g.sc17.218 Carica papaya HOM05D002504 ORTHO05D007555 6.1e-121 438.3 390 54.4
Manes.14G075600 Manihot esculenta HOM05D002504 ORTHO05D007555 6.1e-121 438.3 393 55.7
Gohir.D11G032900 Gossypium hirsutum HOM05D002504 ORTHO05D007555 8.0e-121 438.0 392 55.1
Gorai.007G035700 Gossypium raimondii HOM05D002504 ORTHO05D007555 5.2e-120 435.3 392 55.1
TWI39G0444 Tripterygium wilfordii HOM05D002504 ORTHO05D007555 4.4e-119 432.2 391 55.5
Dinv09821 Davidia involucrata HOM05D002504 ORTHO05D007555 7.5e-119 431.4 389 54.5
Actinidia34980 Actinidia chinensis HOM05D002504 ORTHO05D007555 2.2e-118 429.9 393 55.5
ClCG01G016490 Citrullus lanatus HOM05D002504 ORTHO05D007555 7.3e-114 414.8 389 53.5
Sed0014360 Sechium edule HOM05D002504 ORTHO05D007555 9.5e-114 414.5 390 54.4
Atru.BG.192.p Acer truncatum HOM05D002504 ORTHO05D007555 1.2e-113 414.1 350 58.6
CSS0049848 Camellia sinensis var. sinensis HOM05D002504 ORTHO05D007555 2.1e-113 413.3 389 52.4
CSS0041593 Camellia sinensis var. sinensis HOM05D002504 ORTHO05D007555 2.8e-113 412.9 389 52.4
Potri.015G064300 Populus trichocarpa HOM05D002504 ORTHO05D007555 2.8e-113 412.9 393 51.1
THA.LOC104808328 Tarenaya hassleriana HOM05D002504 ORTHO05D007555 3.6e-113 412.5 390 51.5
CsaV3_6G042770 Cucumis sativus L. HOM05D002504 ORTHO05D007555 8.0e-113 411.4 389 52.7
Actinidia19055 Actinidia chinensis HOM05D002504 ORTHO05D007555 1.0e-112 411.0 373 55.5
Rhsim12G0158700 Rhododendron simsii HOM05D002504 ORTHO05D007555 1.4e-112 410.6 389 53.5
MELO3C007518.2 Cucumis melo HOM05D002504 ORTHO05D007555 4.0e-112 409.1 389 52.4
TAR622G0915 Trochodendron aralioides HOM05D002504 ORTHO05D007555 1.2e-111 407.5 389 51.7
Sabra15G0090100 Salix brachista HOM05D002504 ORTHO05D007555 1.5e-111 407.1 393 50.9
TAR374G0022 Trochodendron aralioides HOM05D002504 ORTHO05D007555 1.7e-110 403.7 393 49.4
CANSAT78G1429 Cannabis sativa HOM05D002504 ORTHO05D007555 2.2e-110 403.3 391 51.9
MD14G1195800 Malus domestica HOM05D002504 ORTHO05D007555 4.1e-109 399.1 390 52.3
Cc04_g15430 Coffea canephora HOM05D002504 ORTHO05D007555 7.8e-108 394.8 390 49.5
Oeu022629.1 Olea europaea HOM05D002504 ORTHO05D007555 3.0e-107 392.9 390 49.2
A06p15070 Brassica napus HOM05D002504 ORTHO05D007555 3.6e-105 386.0 392 48.0
Carub.0001s1850 Capsella rubella HOM05D002504 ORTHO05D007555 4.7e-105 385.6 416 47.1
AT1G18850 Arabidopsis thaliana HOM05D002504 ORTHO05D007555 1.1e-104 384.4 396 49.5
BraA06t24622Z Brassica rapa HOM05D002504 ORTHO05D007555 2.3e-104 383.3 392 47.2
AL1G31390 Arabidopsis lyrata HOM05D002504 ORTHO05D007555 4.0e-104 382.5 395 48.6
CARHR019500 Cardamine hirsuta HOM05D002504 ORTHO05D007555 4.0e-104 382.5 391 48.8
PGR083G1477 Punica granatum HOM05D002504 ORTHO05D007555 7.5e-103 378.3 397 50.1
SalBow5G4081 Salvia bowleyana HOM05D002504 ORTHO05D007555 1.3e-102 377.5 397 47.9
PGSC0003DMG400033071 Solanum tuberosum HOM05D002504 ORTHO05D007555 6.4e-102 375.2 393 47.8
Eucgr.A00822 Eucalyptus grandis HOM05D002504 ORTHO05D007555 1.1e-101 374.4 388 47.4
Sp1g16830 Schrenkiella parvula HOM05D002504 ORTHO05D007555 4.1e-101 372.5 418 46.2
SHI03355 Sapria himalayana HOM05D002504 ORTHO05D007555 5.4e-101 372.1 390 47.7
Nitab4.5_0000269g0140 Nicotiana tabacum HOM05D002504 ORTHO05D007555 7.1e-101 371.7 396 47.7
C05p17270 Brassica napus HOM05D002504 ORTHO05D007555 7.8e-100 368.2 419 43.9
BolC5t30427H Brassica oleracea HOM05D002504 ORTHO05D007555 7.8e-100 368.2 419 43.9
Nn3g16999 Nelumbo nucifera HOM05D002504 ORTHO05D007555 1.0e-99 367.9 392 47.4
Sopen06g027310 Solanum pennellii HOM05D002504 ORTHO05D007555 1.7e-99 367.1 394 46.4
Aqoxy3G03288 Aquilegia oxysepala HOM05D002504 ORTHO05D007555 3.0e-99 366.3 394 49.0
Solyc06g071010.4 Solanum lycopersicum HOM05D002504 ORTHO05D007555 3.0e-99 366.3 394 46.7
Aa31LG7G3620 Aethionema arabicum HOM05D002504 ORTHO05D007555 3.9e-99 365.9 390 47.4
Thhalv10007868m.g Eutrema salsugineum HOM05D002504 ORTHO05D007555 3.9e-99 365.9 390 46.9
Nitab4.5_0007394g0010 Nicotiana tabacum HOM05D002504 ORTHO05D007555 1.5e-98 364.0 396 46.5
BcaC05g25787 Brassica carinata HOM05D002504 ORTHO05D007555 1.9e-98 363.6 419 43.2
BcaB07g31903 Brassica carinata HOM05D002504 ORTHO05D007555 4.3e-98 362.5 419 44.6
Peaxi162Scf00013g00007 Petunia axillaris HOM05D002504 ORTHO05D007555 1.4e-96 357.5 393 48.1
MSTRG.4344 Avicennia marina HOM05D002504 ORTHO05D007555 6.8e-96 355.1 393 45.3
Sc10g0009970 Simmondsia chinensis HOM05D002504 ORTHO05D007555 7.6e-95 351.7 390 47.2
CAN.G628.37 Capsicum annuum HOM05D002504 ORTHO05D007555 4.9e-94 349.0 391 46.0
Lsat_1_v5_gn_1_10961 Lactuca sativa HOM05D002504 ORTHO05D007555 1.4e-93 347.4 410 44.9
AUR62038455 Chenopodium quinoa HOM05D002504 ORTHO05D007555 6.6e-91 338.6 397 44.1
PSO591G0510 Papaver somniferum HOM05D002504 ORTHO05D007555 2.5e-90 336.7 395 45.6
MBI03_g18947_MAGBIO Magnolia biondii HOM05D002504 ORTHO05D007555 4.3e-90 335.9 390 43.8
Ah.02g112510 Amaranthus hybridus HOM05D002504 ORTHO05D007555 7.3e-90 335.1 395 44.8
PSO832G2768 Papaver somniferum HOM05D002504 ORTHO05D007555 1.2e-89 334.3 395 44.8
AUR62042153 Chenopodium quinoa HOM05D002504 ORTHO05D007555 2.8e-89 333.2 397 43.8
EL10As5g23568 Beta vulgaris HOM05D002504 ORTHO05D007555 6.2e-89 332.0 404 43.8
DCAR_001955 Daucus carota HOM05D002504 ORTHO05D007555 5.8e-87 325.5 389 45.5
DCAR_001117 Daucus carota HOM05D002504 ORTHO05D007555 5.1e-83 312.4 388 44.3
Migut.I00134 Erythranthe guttata HOM05D002504 ORTHO05D007555 8.7e-83 311.6 397 42.3
HanXRQChr06g0178031 Helianthus annuus HOM05D002504 ORTHO05D007555 3.3e-82 309.7 385 43.4
HPP92_004873 Vanilla planifolia HOM05D002504 ORTHO05D007555 4.3e-82 309.3 355 44.5
MBI11_g21312_MAGBIO Magnolia biondii HOM05D002504 ORTHO05D007555 2.8e-81 306.6 389 41.4
PSO063G6525 Papaver somniferum HOM05D002504 ORTHO05D007555 6.2e-81 305.4 392 44.1
Lj5P114T15 Lonicera japonica HOM05D002504 ORTHO05D007555 3.1e-80 303.1 260 55.4
MBI03_g28522_MAGBIO Magnolia biondii HOM05D002504 ORTHO05D007555 3.4e-79 299.7 389 40.6
Lj7P436T44 Lonicera japonica HOM05D002504 ORTHO05D007555 5.8e-79 298.9 310 49.4
GSVIVG01008049001 Vitis vinifera HOM05D002504 ORTHO05D007555 1.7e-78 297.4 308 51.0
unitig_52.g17495 Utricularia gibba HOM05D002504 ORTHO05D007555 6.0e-76 288.9 395 39.5
Nn5g27262 Nelumbo nucifera HOM05D002504 ORTHO05D007555 7.9e-76 288.5 272 51.8
SGA_v2.0_scaffold56G20046 Striga asiatica HOM05D002504 ORTHO05D007555 1.0e-75 288.1 332 44.6
CDE07G0237 Ceratophyllum demersum HOM05D002504 ORTHO05D007555 3.0e-75 286.6 369 40.9
ECA236G0190 Erigeron canadensis HOM05D002504 ORTHO05D007332 1.3e-67 261.2 305 44.3
ATR1120G016 Amborella trichopoda HOM05D002504 ORTHO05D007555 1.8e-56 224.2 418 36.1
Dinv02434 Davidia involucrata HOM05D002504 ORTHO05D007555 5.3e-56 222.6 176 61.9
Os01g0112100 Oryza sativa ssp. japonica HOM05D002504 ORTHO05D007555 9.4e-45 185.3 268 39.2
Zm00001eb334590 Zea mays HOM05D002504 ORTHO05D007555 1.1e-42 178.3 265 39.2
Zm00001eb126250 Zea mays HOM05D002504 ORTHO05D007555 4.1e-40 169.9 370 33.8
Duzib205G0461 Durio zibethinus HOM05D002504 ORTHO05D007555 1.1e-34 151.8 311 35.0
SEGI_18201 Sequoiadendron giganteum HOM05D002504 ORTHO05D007555 1.6e-31 141.4 400 27.8
arahy.Tifrunner.gnm1.ann1.8LRZ9F Arachis hypogaea HOM05D002504 ORTHO05D007555 6.7e-27 125.9 253 35.2
BcaB07g32205 Brassica carinata HOM05D002504 ORTHO05D007555 2.6e-26 124.0 392 27.3
Pp3c1_3820 Physcomitrium patens HOM05D002504 ORTHO05D007555 1.3e-25 121.7 393 23.4
Pp3c1_3850 Physcomitrium patens HOM05D002504 ORTHO05D007555 1.3e-25 121.7 393 23.4
Aa31LG9G8990 Aethionema arabicum HOM05D000710 ORTHO05D000336 3.8e-22 110.2 227 29.5
AagrBONN_evm.TU.Sc2ySwM_369.370 Anthoceros agrestis HOM05D002504 ORTHO05D007555 3.6e-20 103.6 348 25.0
Mapoly0028s0021 Marchantia polymorpha HOM05D002504 ORTHO05D007555 3.6e-20 103.6 338 23.4
Ciclev10033409m.g Citrus clementina HOM05D002504 ORTHO05D007555 8.0e-20 102.4 180 36.7
Sabra12G0030300 Salix brachista HOM05D002504 ORTHO05D007555 7.5e-18 95.9 174 37.9
Nn5g27265 Nelumbo nucifera HOM05D002504 ORTHO05D007555 2.2e-17 94.4 431 25.3
SMO367G0630 Selaginella moellendorffii HOM05D002504 ORTHO05D007555 1.3e-14 85.1 348 25.6
CBR_g26261 Chara braunii HOM05D002504 ORTHO05D007555 1.6e-07 61.6 271 25.5
Dinv09820 Davidia involucrata HOM05D000025 ORTHO05D000450 5.9e-07 59.7 47 53.2


User provided reference genes

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