Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G185900 Phaseolus vulgaris HOM05D009211 ORTHO05D011170 2.5e-67 258.8 151 100.0
VMungo1215G2572 Vigna mungo HOM05D009211 ORTHO05D011170 6.0e-61 237.7 151 92.1
Glyma.17G077200 Glycine max HOM05D009211 ORTHO05D011170 6.0e-53 211.1 153 71.9
TPR.G2006 Trifolium pratense HOM05D009211 ORTHO05D011170 4.8e-42 174.9 152 69.1
Medtr4g109380 Medicago truncatula HOM05D009211 ORTHO05D011170 1.9e-38 162.9 142 70.4
Lj4g0005212 Lotus japonicus HOM05D009211 ORTHO05D011170 1.9e-35 152.9 149 64.4
Ca_21787_v3 Cicer arietinum L. HOM05D009211 ORTHO05D011170 6.3e-26 121.3 142 52.1
Psat4g047880 Pisum sativum HOM05D009211 ORTHO05D011170 8.5e-23 110.9 290 37.2
Cfa019310 Carpinus fangiana HOM05D009211 ORTHO05D011170 1.1e-14 84.0 131 45.8
Haze_07693 Corylus avellana HOM05D009211 ORTHO05D011170 1.5e-14 83.6 131 45.8
Prupe.5G202900 Prunus persica HOM05D009211 ORTHO05D011170 1.9e-14 83.2 135 42.2
Actinidia04839 Actinidia chinensis HOM05D009211 ORTHO05D011170 5.5e-14 81.6 147 36.1
FAN13G1505 Fragaria x ananassa HOM05D009211 ORTHO05D011170 3.0e-12 75.9 130 39.2
Cpa.g.sc94.21 Carica papaya HOM05D009211 ORTHO05D011170 5.2e-12 75.1 128 39.8
FAN18G1019 Fragaria x ananassa HOM05D009211 ORTHO05D011170 6.7e-12 74.7 137 38.7
FAN08G0220 Fragaria x ananassa HOM05D009211 ORTHO05D011170 1.2e-11 73.9 141 38.3
QL10p018860 Quercus lobata HOM05D009211 ORTHO05D011170 2.6e-11 72.8 128 42.2
Atru.chr9.405 Acer truncatum HOM05D009211 ORTHO05D011170 9.7e-11 70.9 135 38.5
CSS0047999 Camellia sinensis var. sinensis HOM05D009211 ORTHO05D011170 4.8e-10 68.6 125 35.2
FvH4_5g14220 Fragaria vesca HOM05D009211 ORTHO05D011170 8.2e-10 67.8 140 35.7
CiPaw.11G050900 Carya illinoinensis HOM05D009211 ORTHO05D011170 4.1e-09 65.5 141 37.6
Thecc.03G098100 Theobroma cacao HOM05D009211 ORTHO05D011170 7.0e-09 64.7 128 33.6
COL.COLO4_22212 Corchorus olitorius HOM05D009211 ORTHO05D011170 4.5e-08 62.0 128 32.8
Potri.012G066250 Populus trichocarpa HOM05D009211 ORTHO05D011170 1.0e-07 60.8 136 30.1
Manes.06G086800 Manihot esculenta HOM05D009211 ORTHO05D011170 6.5e-07 58.2 124 37.1
Migut.I00442 Erythranthe guttata HOM05D009211 ORTHO05D011170 1.5e-06 57.0 119 32.8
Nitab4.5_0001688g0080 Nicotiana tabacum HOM05D009211 ORTHO05D011170 1.9e-06 56.6 122 34.4
Lsat_1_v5_gn_1_13601 Lactuca sativa HOM05D009211 ORTHO05D011170 5.5e-06 55.1 116 34.5
Oeu038366.1 Olea europaea HOM05D009211 ORTHO05D011170 5.5e-06 55.1 116 35.3


User provided reference genes

Program Settings