Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G180600 Phaseolus vulgaris HOM05D006386 ORTHO05D007575 5.7e-130 467.6 241 100.0
Phvul.002G142200 Phaseolus vulgaris HOM05D006386 ORTHO05D007575 4.4e-122 441.4 239 95.4
VMungo1215G2864 Vigna mungo HOM05D006386 ORTHO05D007575 3.0e-115 418.7 239 88.7
Glyma.17G083800 Glycine max HOM05D006386 ORTHO05D007575 3.7e-105 385.2 240 81.7
Glyma.05G016300 Glycine max HOM05D006386 ORTHO05D007575 2.7e-95 352.4 234 77.8
Ca_21735_v3 Cicer arietinum L. HOM05D006386 ORTHO05D007575 6.8e-83 311.2 236 68.6
Lj6g0003397 Lotus japonicus HOM05D006386 ORTHO05D007575 6.8e-83 311.2 239 66.1
Lalb_Chr13g0302571 Lupinus albus HOM05D006386 ORTHO05D007575 2.9e-81 305.8 242 66.5
arahy.Tifrunner.gnm1.ann1.HL5ANR Arachis hypogaea HOM05D006386 ORTHO05D007575 1.3e-78 297.0 235 63.8
TPR.G23873 Trifolium pratense HOM05D006386 ORTHO05D007575 5.1e-78 295.0 240 64.6
Medtr4g112830 Medicago truncatula HOM05D006386 ORTHO05D007575 8.6e-78 294.3 241 63.5
arahy.Tifrunner.gnm1.ann1.3Z7JIG Arachis hypogaea HOM05D006386 ORTHO05D007575 3.3e-77 292.4 240 61.2
arahy.Tifrunner.gnm1.ann1.X9R15Y Arachis hypogaea HOM05D006386 ORTHO05D007575 3.6e-76 288.9 259 59.8
Medtr4g112610 Medicago truncatula HOM05D006386 ORTHO05D007575 2.4e-75 286.2 244 62.3
Dinv36853 Davidia involucrata HOM05D006386 ORTHO05D007575 1.1e-61 240.7 245 52.2
Duzib068G0691 Durio zibethinus HOM05D006386 ORTHO05D007575 1.3e-60 237.3 242 51.7
COL.COLO4_08656 Corchorus olitorius HOM05D006386 ORTHO05D007575 2.8e-60 236.1 242 52.9
FvH4_5g13000 Fragaria vesca HOM05D006386 ORTHO05D007575 3.6e-60 235.7 243 50.2
FAN08G0928 Fragaria x ananassa HOM05D006386 ORTHO05D007575 1.4e-59 233.8 243 50.2
FAN18G3466 Fragaria x ananassa HOM05D006386 ORTHO05D007575 1.8e-59 233.4 243 49.8
Thecc.03G113300 Theobroma cacao HOM05D006386 ORTHO05D007575 2.4e-59 233.0 242 51.7
FAN13G1489 Fragaria x ananassa HOM05D006386 ORTHO05D007575 5.3e-59 231.9 243 50.2
RcHm_v2.0_Chr7g0184161 Rosa chinensis HOM05D006386 ORTHO05D007575 5.3e-59 231.9 243 50.2
QL10p021984 Quercus lobata HOM05D006386 ORTHO05D007575 9.0e-59 231.1 240 54.2
arahy.Tifrunner.gnm1.ann1.7DA3AY Arachis hypogaea HOM05D006386 ORTHO05D007575 3.4e-58 229.2 242 55.0
GSVIVG01008195001 Vitis vinifera HOM05D006386 ORTHO05D007575 3.4e-58 229.2 243 49.8
CiPaw.16G081700 Carya illinoinensis HOM05D006386 ORTHO05D007575 2.9e-57 226.1 242 52.1
Gorai.007G040700 Gossypium raimondii HOM05D006386 ORTHO05D007575 4.9e-57 225.3 242 50.4
Atru.chr9.671 Acer truncatum HOM05D006386 ORTHO05D007575 6.4e-57 224.9 245 47.8
Cfa019518 Carpinus fangiana HOM05D006386 ORTHO05D007575 2.4e-56 223.0 246 51.6
Gohir.D11G038000 Gossypium hirsutum HOM05D006386 ORTHO05D007575 4.2e-56 222.2 242 50.0
Ciclev10021913m.g Citrus clementina HOM05D006386 ORTHO05D007575 5.5e-56 221.9 243 49.0
Psat4g044400 Pisum sativum HOM05D006386 ORTHO05D007575 9.3e-56 221.1 236 55.1
CSS0007083 Camellia sinensis var. sinensis HOM05D006386 ORTHO05D007575 1.6e-55 220.3 245 48.6
CANSAT80G2620 Cannabis sativa HOM05D006386 ORTHO05D007575 3.5e-55 219.2 242 47.9
Actinidia36923 Actinidia chinensis HOM05D006386 ORTHO05D007575 6.0e-55 218.4 245 47.8
Manes.01G023400 Manihot esculenta HOM05D006386 ORTHO05D007575 2.3e-54 216.5 241 47.7
Gohir.A11G034600 Gossypium hirsutum HOM05D006386 ORTHO05D007575 1.9e-53 213.4 243 48.6
TWI81G0025 Tripterygium wilfordii HOM05D006386 ORTHO05D007575 4.3e-53 212.2 243 47.7
Lj9A435T83 Lonicera japonica HOM05D006386 ORTHO05D007575 7.4e-53 211.5 237 49.8
Hma1.2p1_0340F.1_g130200 Hydrangea macrophylla HOM05D006386 ORTHO05D007575 1.6e-52 210.3 244 46.7
Potri.015G055500 Populus trichocarpa HOM05D006386 ORTHO05D007575 6.2e-52 208.4 241 46.5
EL10Ac9g20981 Beta vulgaris HOM05D006386 ORTHO05D007575 5.3e-51 205.3 244 45.5
AUR62032161 Chenopodium quinoa HOM05D006386 ORTHO05D007575 6.9e-51 204.9 243 45.7
Sopen03g033610 Solanum pennellii HOM05D006386 ORTHO05D007575 9.0e-51 204.5 243 45.7
Sed0015508 Sechium edule HOM05D006386 ORTHO05D007575 1.2e-50 204.1 242 48.3
MD14G1218500 Malus domestica HOM05D006386 ORTHO05D007575 1.5e-50 203.8 243 47.3
THA.LOC104819388 Tarenaya hassleriana HOM05D006386 ORTHO05D007575 3.4e-50 202.6 244 46.7
Solyc03g114520.3 Solanum lycopersicum HOM05D006386 ORTHO05D007575 4.5e-50 202.2 243 44.9
PGSC0003DMG400024511 Solanum tuberosum HOM05D006386 ORTHO05D007575 1.0e-49 201.1 243 44.9
Nn3g17620 Nelumbo nucifera HOM05D006386 ORTHO05D007575 6.5e-49 198.4 239 48.1
Nitab4.5_0000646g0180 Nicotiana tabacum HOM05D006386 ORTHO05D007575 2.5e-48 196.4 243 43.6
TAR629G0047 Trochodendron aralioides HOM05D002187 ORTHO05D002243 1.2e-47 194.1 192 53.6
Eucgr.K02638 Eucalyptus grandis HOM05D006386 ORTHO05D007575 6.0e-47 191.8 242 43.8
Sabra15G0080700 Salix brachista HOM05D006386 ORTHO05D007575 6.0e-47 191.8 268 42.2
Sc04g0004070 Simmondsia chinensis HOM05D006386 ORTHO05D007575 5.1e-46 188.7 251 44.6
ClCG06G015230 Citrullus lanatus HOM05D006386 ORTHO05D007575 6.7e-46 188.3 247 46.2
Hund02537 Selenicereus undatus HOM05D006386 ORTHO05D007575 6.7e-46 188.3 241 42.3
Cc04_g07860 Coffea canephora HOM05D006386 ORTHO05D007575 1.9e-45 186.8 243 43.6
Nitab4.5_0004342g0080 Nicotiana tabacum HOM05D006386 ORTHO05D007575 1.9e-45 186.8 243 42.0
Oeu010193.1 Olea europaea HOM05D006386 ORTHO05D007575 2.5e-45 186.4 238 44.1
PGR044G0997 Punica granatum HOM05D006386 ORTHO05D007575 2.5e-45 186.4 239 43.9
Prupe.5G212600 Prunus persica HOM05D006386 ORTHO05D007575 2.1e-44 183.3 241 43.6
vmacro17651 Vaccinium macrocarpon HOM05D006386 ORTHO05D007575 1.4e-43 180.6 178 53.9
SalBow1G4471 Salvia bowleyana HOM05D006386 ORTHO05D007575 1.8e-43 180.3 235 41.7
Thhalv10003465m.g Eutrema salsugineum HOM05D006386 ORTHO05D007575 4.1e-43 179.1 240 41.7
Aa31LG4G9830 Aethionema arabicum HOM05D006386 ORTHO05D007575 2.2e-41 173.3 241 41.5
Lsat_1_v5_gn_4_112761 Lactuca sativa HOM05D006386 ORTHO05D007575 5.0e-41 172.2 241 41.9
AL7G44320 Arabidopsis lyrata HOM05D006386 ORTHO05D007575 6.5e-41 171.8 243 39.9
AT5G35520 Arabidopsis thaliana HOM05D006386 ORTHO05D007575 5.5e-40 168.7 239 41.0
HanXRQChr16g0502011 Helianthus annuus HOM05D006386 ORTHO05D007575 5.5e-40 168.7 242 43.0
PSO017G3209 Papaver somniferum HOM05D006386 ORTHO05D007575 9.3e-40 167.9 224 42.4
Carub.0007s3127 Capsella rubella HOM05D006386 ORTHO05D007575 1.2e-39 167.5 242 38.0
Migut.D01482 Erythranthe guttata HOM05D006386 ORTHO05D007575 1.6e-39 167.2 242 41.3
MSTRG.4502 Avicennia marina HOM05D006386 ORTHO05D007575 1.0e-38 164.5 242 40.5
PSO478G3500 Papaver somniferum HOM05D006386 ORTHO05D007575 1.8e-38 163.7 248 39.1
CARHR217490 Cardamine hirsuta HOM05D006386 ORTHO05D007575 5.1e-38 162.2 239 38.9
Lsat_1_v5_gn_4_112801 Lactuca sativa HOM05D006386 ORTHO05D007575 6.7e-38 161.8 224 42.9
CDE02G3865 Ceratophyllum demersum HOM05D006386 ORTHO05D007575 2.5e-37 159.8 244 40.2
unitig_62.g23762 Utricularia gibba HOM05D006386 ORTHO05D007575 1.6e-36 157.1 264 38.6
Sp7g06840 Schrenkiella parvula HOM05D006386 ORTHO05D007575 2.2e-36 156.8 245 37.6
BcaB06g26945 Brassica carinata HOM05D006386 ORTHO05D007575 6.3e-36 155.2 243 38.3
SHI18989 Sapria himalayana HOM05D006386 ORTHO05D007575 8.2e-36 154.8 185 43.2
Aqoxy6G00629 Aquilegia oxysepala HOM05D006386 ORTHO05D007575 1.4e-35 154.1 232 39.2
ECA246G4419 Erigeron canadensis HOM05D006386 ORTHO05D007575 5.3e-35 152.1 239 40.6
SGA_v2.0_scaffold42G16024 Striga asiatica HOM05D006386 ORTHO05D007575 9.0e-35 151.4 261 36.4
ECA232G1078 Erigeron canadensis HOM05D006386 ORTHO05D007575 1.2e-34 151.0 239 37.7
C04p43230 Brassica napus HOM05D006386 ORTHO05D007575 2.0e-34 150.2 230 39.1
BcaC02g09476 Brassica carinata HOM05D006386 ORTHO05D007575 7.7e-34 148.3 230 38.7
BolC4t25901H Brassica oleracea HOM05D006386 ORTHO05D007575 1.0e-33 147.9 230 38.7
ATR0730G046 Amborella trichopoda HOM05D006386 ORTHO05D007575 2.2e-33 146.7 242 36.4
Actinidia33576 Actinidia chinensis HOM05D006386 ORTHO05D007575 3.8e-33 146.0 263 38.0
CsaV3_1G003130 Cucumis sativus L. HOM05D006386 ORTHO05D007575 8.5e-33 144.8 246 40.2
Peaxi162Scf00119g00118 Petunia axillaris HOM05D006386 ORTHO05D007575 2.7e-31 139.8 254 37.4
HPP92_015441 Vanilla planifolia HOM05D006386 ORTHO05D007575 7.9e-31 138.3 240 35.8
Aqoxy3G00630 Aquilegia oxysepala HOM05D006386 ORTHO05D007575 1.5e-29 134.0 238 36.1
MD06G1208100 Malus domestica HOM05D006386 ORTHO05D007575 2.0e-29 133.7 178 45.5
A04p09730 Brassica napus HOM05D006386 ORTHO05D007575 5.3e-27 125.6 202 37.1
MBI10_g16789_MAGBIO Magnolia biondii HOM05D006386 ORTHO05D007575 2.6e-26 123.2 172 41.9
Nitab4.5_0005402g0030 Nicotiana tabacum HOM05D002295 ORTHO05D007575 2.6e-26 123.2 245 34.3
MSTRG.4503 Avicennia marina HOM05D006386 ORTHO05D007575 4.5e-26 122.5 177 39.0
BraA04t16635Z Brassica rapa HOM05D006386 ORTHO05D007575 4.5e-26 122.5 205 36.6
Ca_24277_v3 Cicer arietinum L. HOM05D006386 ORTHO05D007575 1.0e-25 121.3 102 66.7
Cpa.g.sc53.23 Carica papaya HOM05D006386 ORTHO05D007575 2.8e-20 103.2 78 65.4
CAN.G982.14 Capsicum annuum HOM05D006386 ORTHO05D007575 6.3e-20 102.1 137 40.9
Cpa.g.sc53.22 Carica papaya HOM05D006386 ORTHO05D007575 1.6e-18 97.4 142 42.3
Os02g0620100 Oryza sativa ssp. japonica HOM05D006386 ORTHO05D007575 1.0e-17 94.7 205 31.2
TWI81G0622 Tripterygium wilfordii HOM05D006386 ORTHO05D007575 1.7e-17 94.0 128 42.2
Zm00001eb433940 Zea mays HOM05D006386 ORTHO05D007575 1.7e-17 94.0 198 30.8
AUR62036917 Chenopodium quinoa HOM05D006386 ORTHO05D007575 6.5e-17 92.0 134 39.6
Zm00001eb065850 Zea mays HOM05D006386 ORTHO05D007575 4.7e-15 85.9 205 30.2
Actinidia27067 Actinidia chinensis HOM05D006386 ORTHO05D007575 3.0e-14 83.2 60 66.7
Medtr4g110120 Medicago truncatula HOM05D006386 ORTHO05D007575 2.0e-13 80.5 63 63.5
MELO3C028557.2 Cucumis melo HOM05D006386 ORTHO05D007575 1.8e-11 73.9 58 60.3
DCAR_029598 Daucus carota HOM05D006386 ORTHO05D007575 4.1e-11 72.8 142 33.1
Mapoly0051s0086 Marchantia polymorpha HOM05D006386 ORTHO05D007575 1.6e-07 60.8 190 25.8
Gorai.N008500 Gossypium raimondii HOM05D006386 ORTHO05D007575 6.8e-06 55.5 39 59.0
Rhsim08G0139600 Rhododendron simsii HOM05D006386 ORTHO05D007575 8.8e-06 55.1 41 61.0


User provided reference genes

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